FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KC2D2_DANRE (Calcium/calmodulin-dependent protein kinase type II delta 2 chain OS=Danio rerio GN=camk2d2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 56/192 (29.17%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   43 FNFIT--EMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHL--GQIKIGDLGLAAILRGSQQA-HSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            F+ +T  E+F     REY   Y+  D     +  +QIL  + + H +   ++HRDLK +N+ +   +    +K+ D GLA  ++G QQA     GTP +++PE+  +D Y + VD+++ G+ +L +L   YP     +  ++Y+++ +G    P         EA+  + K L  N SKR+ A E    P++
Sbjct:   89 FDLVTGGELFEDIVAREY---YSEAD---ASHCIQQILESVHHCHVNG--IVHRDLKPENLLLASKMKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV-ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAPKHPWI 271          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AUR3_ARATH (Serine/threonine-protein kinase Aurora-3 OS=Arabidopsis thaliana GN=AUR3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 51/197 (25.89%), Postives = 99/197 (50.25%), Query Frame = 1
Query:   19 WIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL-ENVSKRLPAKELLLDPFLASDA 603
            W   + R F  I E    G L    K+   +  +    +   + + +AY HG    VIHRD+K +N+ ++ H G++KI D G +  ++ S +  ++ GT +++APE+ E  D++  VD ++ G+   E L  + P+ E  +    +K++    L          EA+  + + L ++ SKRL  ++++  P++  +A
Sbjct:   88 WFHDNERIF-LILEYAHGGELYGVLKQNGHLTEQQAATYIASLSQALAYCHGKC--VIHRDIKPENLLLD-HEGRLKIADFGWS--VQSSNKRKTMCGTLDYLAPEMVENRDHDYAVDNWTLGILCYEFLYGNPPF-EAESQKDTFKRILKIDLSFPLTPNVSEEAKNLISQLLVKDPSKRLSIEKIMQHPWIVKNA 277          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 59/220 (26.82%), Postives = 103/220 (46.82%), Query Frame = 1
Query:   43 FNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDY--NELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSG--KLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQ-NLNPNGAVMELVPKF 687
            F  + E  + G L +Y  K+ RV+    +   +QIL  + Y H H   V+HRDLK +N+ ++  +   KI D GL+ ++   +   +  G+P + APE+          VDI+S G+ +  +L    P+ +   P  ++KK+  G   +P   +R   + A   +     +  KR   K++    +   D     L P+ PS+  N+  + AV E+  KF
Sbjct:   89 FFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRH--MVVHRDLKPENVLLDAQM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-LFKKIRGGVFYIPDYLNR---SVATLLMHMLQVDPLKRATIKDIREHEWFKQDL-PSYLFPEDPSYDANVIVDEAVKEVCEKF 300          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: YPK1_YEAST (Serine/threonine-protein kinase YPK1 OS=Saccharomyces cerevisiae GN=YPK1 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 62/211 (29.38%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   49 FITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-LRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKL--PGAFHRIQDAEARRFVGKCLENVSKRL---PAKELLLDPFLASDAGEPLLI-----PQVPSFQN 645
            F+      G L  + +K  R D+   + +  ++L  +  LH  D  V++RDLK +NI ++ + G I + D GL  + ++   +  +  GTPE++APE L    Y + VD ++ G+ + EMLT   PY +   P ++YKK+    L  P  F R  DA+    +G    + ++RL    A E+   PF +  + + LL+     P  P+  N
Sbjct:  422 FVLAFINGGELFYHLQKEGRFDLSRARFYTAELLCALDNLHKLD--VVYRDLKPENILLD-YQGHIALCDFGLCKLNMKDDDKTDTFCGTPEYLAPELLLGLGYTKAVDWWTLGVLLYEMLTGLPPYYDEDVP-KMYKKILQEPLVFPDGFDR--DAK-DLLIGLLSRDPTRRLGYNGADEIRNHPFFSQLSWKRLLMKGYIPPYKPAVSN 625          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: ULK1_MOUSE (Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 59/212 (27.83%), Postives = 96/212 (45.28%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQ--------IKIGDLGLAAILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQI---YKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDA----GEPLLIPQVPS 636
            + E    G L +Y      +    V+ + +QI   +  LH     +IHRDLK  NI ++   G+        +KI D G A  L+ +  A ++ G+P +MAPE +  + Y+   D++S G  V + LT   P+ + S+P  +   Y+K  +  L  A  R   A  R+ +   L+ N   R+   E    PFL +        P+ +P  PS
Sbjct:   91 VMEYCNGGDLADYLHTMRTLSEDTVRLFLQQIAGAMRLLHSKG--IIHRDLKPQNILLSNPGGRRANPSNIRVKIADFGFARYLQSNMMAATLCGSPMYMAPEVIMSQHYDGKADLWSIGTIVYQCLTGKAPF-QASSPQDLRLFYEK--NKTLVPAIPRETSAPLRQLLLALLQRNHKDRMDFDEFFHHPFLDASTPIKKSPPVPVPSYPS 297          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STK6_RAT (Serine/threonine-protein kinase 6 OS=Rattus norvegicus GN=Aurka PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 53/206 (25.73%), Postives = 103/206 (50.00%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEP 612
            +R Y  + D  R     I E    GT+    +K ++ D +    +  ++   ++Y H     VIHRD+K +N+ + G  G++KI D G +     S++  ++ GT ++  PE+ E   ++E VD++S G+   E L    P+ E     + Y++++  ++   F       AR  + + L+ N S+RL   E+L  P++ +++ +P
Sbjct:  187 LRLYGYFHDATR--VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLL-GSNGELKIADFGWSVHAPSSRRT-TLCGTLDYQPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF-EAHTYQETYRRIS--RVEFTFPDFVTEGARDLISRLLKHNSSQRLTLAEVLEHPWIKANSSKP 383          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SPEG_DANRE (Striated muscle preferentially expressed protein kinase OS=Danio rerio GN=speg PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 57/192 (29.69%), Postives = 94/192 (48.96%), Query Frame = 1
Query:   34 RRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFV-NGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQD--AEARRFVGKCLENVSKRLPAKELLLDPFLAS 597
            RR    +TE+     L    K+ T ++   V++  RQ+L GI YLH +D  +IH DLK +NI + +    QI+I D G A  ++ +++ +   G PEF+APE+  +   ++  DI+  G+     LT   P++   N       + +  +       +D   EA+ F+ K L +   R  A E LL P+  S
Sbjct: 1320 RRVVIILTELCHEELLERITKRTTILESE-VQSIIRQLLEGIEYLHQND--IIHLDLKPENILMADQKTDQIRICDFGNALKVKPNEELYCKYGIPEFIAPEIVNQSPISKSTDIWPVGVITYLCLTGVSPFAG-ENDRDTLLNIRNYNVAFEESMFKDLCREAKGFIIKVLVSNKLRPDATECLLHPWFKS 1507          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PLK1_XENLA (Serine/threonine-protein kinase PLK1 OS=Xenopus laevis GN=plk1 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 54/184 (29.35%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFLAS 597
            + E+    +L E  K+   V     + + +Q + G  YLH +   VIHRDLK  N+F+N  + ++KIGD GLA  +    ++  ++ GTP ++APE L ++ ++  VDI+S G C++  L    P  E S   + Y ++   +     H I    A         + + R    +LL D F  S
Sbjct:  120 VLELCRRRSLLELHKRRKAVTEPEARYYLKQTISGCQYLHSNR--VIHRDLKLGNLFLNDEM-EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLGKKGHSFEVDIWSIG-CIMYTLLVGKPPFETSCLKETYMRIKKNEYSIPKH-INPVAAALIQKMLRSDPTSRPTIDDLLNDEFFTS 298          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PK2_DICDI (Protein kinase 2 OS=Dictyostelium discoideum GN=pkgB PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 52/173 (30.06%), Postives = 87/173 (50.29%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAK 567
            + +    G L  + K+  R     VK +A +I+  + +LH  D  +++RDLK +NI ++   G I I D GL+  +  +    +  GTPE++APE L    +   VD +S G  + EMLT   P+    N + +Y+K+ +G+L    +   +A++    G     V KRL  K
Sbjct:  229 VLDFVNGGELFFHLKREGRFSEPRVKIYAAEIVSALDHLHKQD--IVYRDLKPENILLDSE-GHICITDFGLSKKIETTDGTFTFCGTPEYLAPEVLNGHGHGCAVDWWSLGTLLYEMLTGLPPFYS-QNVSTMYQKILNGELKIPTYISPEAKS-LLEGLLTREVDKRLGTK 396          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK3_MOUSE (Serine/threonine-protein kinase Nek3 OS=Mus musculus GN=Nek3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 42/132 (31.82%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  124 VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQ-AHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSE----------CSNPAQIYKKVTSGKLPG 483
            + NW  QI  G+ ++H     V+HRD+K  N+F+  H G++K+GD G A +L      A + +GTP ++ PE++E   YN   DI+S G  + E+    +P+            C  P      + S KL G
Sbjct:  102 ILNWFIQICLGVNHIHKRR--VLHRDIKSKNVFLT-HNGKVKLGDFGSARLLSSPMAFACTYVGTPYYVPPEIWENLPYNNKSDIWSLGCILYELCALKHPFQANSWKNLILKICQGPIHPLPALYSCKLQG 230          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
KC2D2_DANRE6.977e-1129.17Calcium/calmodulin-dependent protein kinase type I... [more]
AUR3_ARATH6.977e-1125.89Serine/threonine-protein kinase Aurora-3 OS=Arabid... [more]
AAPK2_MOUSE6.977e-1126.825'-AMP-activated protein kinase catalytic subunit ... [more]
YPK1_YEAST9.112e-1129.38Serine/threonine-protein kinase YPK1 OS=Saccharomy... [more]
ULK1_MOUSE9.112e-1127.83Serine/threonine-protein kinase ULK1 OS=Mus muscul... [more]
STK6_RAT9.112e-1125.73Serine/threonine-protein kinase 6 OS=Rattus norveg... [more]
SPEG_DANRE9.112e-1129.69Striated muscle preferentially expressed protein k... [more]
PLK1_XENLA9.112e-1129.35Serine/threonine-protein kinase PLK1 OS=Xenopus la... [more]
PK2_DICDI9.112e-1130.06Protein kinase 2 OS=Dictyostelium discoideum GN=pk... [more]
NEK3_MOUSE9.112e-1131.82Serine/threonine-protein kinase Nek3 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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