FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15247 contig Ccv1_Contig15247:1..734. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17
Identity = 61/201 (30.35%), Postives = 95/201 (47.26%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPF 588
            +++Y    D   +      E    G++++  K Y  +     + + RQIL G++YLH +   ++HRD+K  NI +    G +K+GD G    L  I        SV GTP +M+PE+   E Y    D++S G  V+EMLT   P++E    A I+K  T    P     I +   R F+ +      +R  A+ELL   F
Sbjct:  425 VQYYGCLRDRAEKILTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN--MIVHRDIKGANI-LRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISE-HGRDFLRRIFVEARQRPSAEELLTHHF 621          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K2_HUMAN (Mitogen-activated protein kinase kinase kinase 2 OS=Homo sapiens GN=MAP3K2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17
Identity = 62/202 (30.69%), Postives = 94/202 (46.53%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLG----LAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL 591
            +++Y    D   +T +   E    G++++  K Y  +     + + RQIL G+ YLH +   ++HRD+K  NI +    G +K+GD G    L  I        SV GTP +M+PE+   E Y    DI+S    V+EMLT   P++E    A I+K  T    P     + D   R F+ +       R  A ELL   F+
Sbjct:  419 VQYYGCLRDPQEKTLSIFMEYMPGGSIKDQLKAYGALTENVTRKYTRQILEGVHYLHSN--MIVHRDIKGANI-LRDSTGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVACTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPKLPPHVSD-YTRDFLKRIFVEAKLRPSADELLRHMFV 616          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAFK (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFV-NGH-LGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQD--AEARRFVGKCLE-NVSKRLPAKELL 576
            D++ F  +TE +  G L E      + D     N  +QIL GI YLH H+  ++HRD+K +NI + N H L  IKI D GL++      +    +GT  ++APE+  + YNE  D++S G+ +L +L   YP     N   I KKV  GK    F+  ++   EA+  +   L  + +KR+ AKE L
Sbjct:  137 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKHSLLNIKIVDFGLSSFFSKDNKLRDRLGTAYYIAPEVLRKKYNEKCDVWSCGV-ILYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEAL 320          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17
Identity = 65/187 (34.76%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   31 DRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFV-NGH-LGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQD--AEARRFVGKCLE-NVSKRLPAKELL 576
            D++ F  +TE +  G L E      + D     N  +QIL GI YLH H+  ++HRD+K +NI + N H L  IKI D GL++      +    +GT  ++APE+  + YNE  D++S G+ +L +L   YP     N   I KKV  GK    F+  ++   EA+  +   L  + +KR+ AKE L
Sbjct:  137 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKHSLLNIKIVDFGLSSFFSKDNKLRDRLGTAYYIAPEVLRKKYNEKCDVWSCGV-ILYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISEEAKELIKLMLTYDYNKRITAKEAL 320          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M2K1_ARATH (Mitogen-activated protein kinase kinase 1 OS=Arabidopsis thaliana GN=MKK1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17
Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   46 NFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEED-YNELVDIYSFGMCVLEMLTSDYPYSE------CSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSK-RLPAKELLLDPFL 591
            + I E    G+L +  KK  +V    +    +++LRG+ Y+H H+  +IHRDLK  N+ +N H G++KI D G++ IL   S  A+S +GT  +M+PE      Y+   DI+S G+ +LE  T  +PY+        S+  ++   +     P A   +   E   F+ +C++   + R  AKELL   F+
Sbjct:  140 SIILEFMDGGSLADLLKKVGKVPENMLSAICKRVLRGLCYIH-HERRIIHRDLKPSNLLIN-HRGEVKITDFGVSKILTSTSSLANSFVGTYPYMSPERISGSLYSNKSDIWSLGLVLLECATGKFPYTPPEHKKGWSSVYELVDAIVENPPPCAPSNLFSPEFCSFISQCVQKDPRDRKSAKELLEHKFV 328          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAKA_DICDI (Serine/threonine-protein kinase pakA OS=Dictyostelium discoideum GN=pakA PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17
Identity = 63/190 (33.16%), Postives = 94/190 (49.47%), Query Frame = 1
Query:   58 EMFTSGTLREYRKKYTRVDIRA--VKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEP 612
            E  + G L E   +Y  + +    +    +++LRG+ Y+H  +   IHRD+K DNI +  + G+IK+ D G AA L    Q+ +SV+GTP +MAPEL    +Y+  VD++S G+   EM   + PY E      ++   T G  P         E   F+  CLE +  KR  +  LL  PFL      P
Sbjct:  985 EFMSGGCLTEVLDQYRDIQLNESQIAFVCQEVLRGLEYIHKFNR--IHRDIKSDNILIGAN-GEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEGEPPYLEFPPLRALFLLTTQGLPPIRDAHKWSKEFNDFLALCLEKDTEKRASSSSLLHHPFLKRACSGP 1171          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y9877_DICDI (Serine/threonine-protein kinase DDB_G0283821 OS=Dictyostelium discoideum GN=DDB_G0283821 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.819e-17
Identity = 62/196 (31.63%), Postives = 98/196 (50.00%), Query Frame = 1
Query:   37 RTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEEDYN---ELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKC-LENVSKRLPAKELLLDPFLASDAGEP 612
            R   F  E    G+L +  K+Y       +  +  Q+L+G+AYL  H+  VIHRD+K DNI +    G IK+ D G +       +  +V+GTP +MAPE+ + D N      DI+S G  +LEMLT + PY +      ++  V +   P        A+ + F+  C + +++KR  A +LL  P++     EP
Sbjct:   83 RYLYFALEFIEGGSLAKIAKRYGCFQEPLLSRYFSQVLKGLAYL--HEKGVIHRDIKSDNILITKE-GVIKLADFG-SCTYSAIDRKLTVVGTPFWMAPEVIQMDMNARSTACDIWSLGCTLLEMLTGNPPYWDLGTMPAMFAMVNNPHPP--IPNNISADLKHFLLACFVRDINKRPTASQLLEHPWIKQHIHEP 272          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NRBP_DROPS (Nuclear receptor-binding protein homolog OS=Drosophila pseudoobscura pseudoobscura GN=Madm PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.819e-17
Identity = 63/215 (29.30%), Postives = 100/215 (46.51%), Query Frame = 1
Query:    1 IRFYASWIDV---DRRTFNFITEMFTSGTLREYRKKYTR----VDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI---------LRGSQQAHSVIGTPEFMAPEL-YEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFL 591
            ++F+  W D    +R    FITE  +SG+L+++ K+  R    + + + + W  QIL  ++YLH   PP+IH +L CD+IF+  H G +KIG +   A+            +++     G   F APE    E     +DIY+FGMC LEM   +   S   + A     +    +      ++    R  + KCL    +  P A +LL  P L
Sbjct:  184 VKFHRYWTDTQQAERPRVIFITEYMSSGSLKQFLKRTKRNAKRLPLESWRRWCTQILSALSYLHSCTPPIIHGNLTCDSIFIQ-HNGLVKIGSVVPDAVHYSVRRQWDRESAREQERERGAHYFQAPEYGAAEQLTAALDIYAFGMCALEMAALEIQPSNSESTA-----INEETIQRTICSLESDLQRDLIEKCLNPQPQGRPSANDLLFHPLL 392          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SID1_SCHPO (Serine/threonine-protein kinase sid1 OS=Schizosaccharomyces pombe GN=sid1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17
Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAIL-RGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPLLIPQVPSFQN 645
            I++Y  +  VD  T   + E    G++    K   R++ + +    R++L G+ YLHG +   IHRD+K  NI ++   G +K+ D G+AA L   + + H+ +GTP +MAPE+ ++  Y    DI+S G+  +EM  +  P     +P ++  ++   + P           R FV  CL+ N + R  AKELL  PF+ S      +IP +   +N
Sbjct:   68 IQYYGCF--VDGYTLWILMEHMDGGSVSGLLKM-GRLNEQVISIILREVLYGLNYLHGQNK--IHRDIKAANILLSSSTGNVKLADFGVAAQLSNAASRRHTFVGTPFWMAPEVIQQTSYGLAADIWSLGITAIEM-ANGIPPRATMHPMRVIFEIPQSEPPKLDDHFSPT-FRDFVSCCLDLNPNMRWSAKELLQHPFIKSAGTVKDIIPLLVQKEN 278          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K6_MOUSE (Mitogen-activated protein kinase kinase kinase 6 OS=Mus musculus GN=Map3k6 PE=1 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 56/158 (35.44%), Postives = 87/158 (55.06%), Query Frame = 1
Query:  133 WARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYEE---DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + RQIL+G++YLH  +  ++HRD+K DN+ +N   G +KI D G +  L G +    +  GT ++MAPE+ ++    Y +  DI+S G  V+EM T   P+ E  +P     +V   K+         AEA+ F+ +  E +   R  A+ELL DPFL
Sbjct:  752 YTRQILQGLSYLH--ENRIVHRDIKGDNVLINTFSGLLKISDFGTSKRLAGITPCTETFTGTLQYMAPEIIDQGPRGYGKAADIWSLGCTVIEMATGRPPFHELGSPQAAMFQVGMYKVHPPVPGSLSAEAQAFLLRTFEPDPRLRASAQELLGDPFL 907          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
M3K3_MOUSE1.313e-1730.35Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K2_HUMAN1.714e-1730.69Mitogen-activated protein kinase kinase kinase 2 O... [more]
CDPK1_PLAFK1.714e-1734.76Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CDPK1_PLAF71.714e-1734.76Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
M2K1_ARATH2.239e-1731.41Mitogen-activated protein kinase kinase 1 OS=Arabi... [more]
PAKA_DICDI2.924e-1733.16Serine/threonine-protein kinase pakA OS=Dictyostel... [more]
Y9877_DICDI3.819e-1731.63Serine/threonine-protein kinase DDB_G0283821 OS=Di... [more]
NRBP_DROPS3.819e-1729.30Nuclear receptor-binding protein homolog OS=Drosop... [more]
SID1_SCHPO4.988e-1730.28Serine/threonine-protein kinase sid1 OS=Schizosacc... [more]
M3K6_MOUSE8.509e-1735.44Mitogen-activated protein kinase kinase kinase 6 O... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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