FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK2_MOUSE (Serine/threonine-protein kinase PAK 2 OS=Mus musculus GN=Pak2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 63/188 (33.51%), Postives = 98/188 (52.13%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA-----RRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DN+ + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY    NP +    + +   P     +Q+ E      R F+ +CLE +V KR  AKELL  PFL
Sbjct:  322 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLL-GMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK2_HUMAN (Serine/threonine-protein kinase PAK 2 OS=Homo sapiens GN=PAK2 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 63/188 (33.51%), Postives = 98/188 (52.13%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA-----RRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DN+ + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY    NP +    + +   P     +Q+ E      R F+ +CLE +V KR  AKELL  PFL
Sbjct:  322 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ--VIHRDIKSDNVLL-GMEGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTP----ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 500          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K7L_DROME (Putative mitogen-activated protein kinase kinase kinase 7-like OS=Drosophila melanogaster GN=Takl1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 60/186 (32.26%), Postives = 91/186 (48.92%), Query Frame = 1
Query:   52 ITEMFTSGTLREY-----RKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIY---KKVTSG-KLPGAFHRIQDAEARRFVGKCLENVS--KRLPAKEL 573
            + E    G+L  Y     + +YT   +     WA Q  + +AYLH  D P++HRD+K  N+ +      +KI D GLA  +  S     + GT  +MAPE  +   Y    D+YSFG+ + E++T   PYS   NP   Y   K ++SG KLP    R    E  + + +C  +++  KR   KE+
Sbjct:   82 LMEYLEEGSLHNYLYGDDKWEYT---VEQAVRWALQCAKALAYLHSLDRPIVHRDIKPQNMLLYNQHEDLKICDFGLATDM--SNNKTDMQGTLRYMAPEAIKHLKYTAKCDVYSFGIMLWELMTRQLPYSHLENPNSQYAIMKAISSGEKLPMEAVRSDCPEGIKQLMECCMDINPEKRPSMKEI 262          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KRAF1_CAEBR (Raf homolog serine/threonine-protein kinase OS=Caenorhabditis briggsae GN=lin-45 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.203e-16
Identity = 50/131 (38.17%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  112 DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-----LRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKL 477
            ++ AV +  +Q+  G+ YLH  +  +IHRDLK +NIF+   +  +KIGD GLA +     + G QQ     G+  +MAPE+     +  Y    D+YSFG+C+ E+L+S  PYS  +N  QI   V  G L
Sbjct:  573 EMSAVIDILKQVSLGMNYLHSKN--IIHRDLKTNNIFLMDDMSTVKIGDFGLATVKTKWTVNGGQQQQQPTGSILWMAPEVIRMQDDNPYTPQSDVYSFGVCMYEILSSHLPYSNINNRDQILFMVGRGYL 701          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK3_RAT (Serine/threonine-protein kinase PAK 3 OS=Rattus norvegicus GN=Pak3 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V +R  AKELL  PFL
Sbjct:  341 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 519          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK3_PONPY (Serine/threonine-protein kinase PAK 3 OS=Pongo pygmaeus GN=PAK3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V +R  AKELL  PFL
Sbjct:  356 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 534          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK3_PANTR (Serine/threonine-protein kinase PAK 3 OS=Pan troglodytes GN=PAK3 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V +R  AKELL  PFL
Sbjct:  356 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 534          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK3_MOUSE (Serine/threonine-protein kinase PAK 3 OS=Mus musculus GN=Pak3 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V +R  AKELL  PFL
Sbjct:  356 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 534          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK3_HUMAN (Serine/threonine-protein kinase PAK 3 OS=Homo sapiens GN=PAK3 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 62/183 (33.88%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V +R  AKELL  PFL
Sbjct:  356 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 534          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK4_ORYSJ (Serine/threonine-protein kinase Nek4 OS=Oryza sativa subsp. japonica GN=NEK4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 67/226 (29.65%), Postives = 104/226 (46.02%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKY--TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKV---TSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDPFL---------ASDAGEPLLIPQVP 633
            + F  +W++        +T     G + E  KK   T      +  W  Q++  + YLH +   V+HRDLKC NIF+      I++GD GLA  L+      SV+GTP +M PEL  +  Y    DI+S G C+ EM  +  P  +  + A +  K+   + G LP  +        +  + K  E+   R  A E+L +P+L          SDA  P+ +P+ P
Sbjct:   68 VEFKEAWVEKGCYVC-IVTGYCEGGDMDELMKKLNGTYFPEEKLLKWFAQLVLAVDYLHSNY--VLHRDLKCSNIFLTKDQ-DIRLGDFGLAKTLKEDDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCMYEM-AAHRPAFKAFDMAGLISKINRSSIGPLPACYSSSMKTLIKSMLRKSPEH---RPTASEILKNPYLQPYVNQCRPLSDAPTPIRMPEKP 285          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
PAK2_MOUSE7.203e-1633.51Serine/threonine-protein kinase PAK 2 OS=Mus muscu... [more]
PAK2_HUMAN7.203e-1633.51Serine/threonine-protein kinase PAK 2 OS=Homo sapi... [more]
M3K7L_DROME7.203e-1632.26Putative mitogen-activated protein kinase kinase k... [more]
KRAF1_CAEBR7.203e-1638.17Raf homolog serine/threonine-protein kinase OS=Cae... [more]
PAK3_RAT1.229e-1533.88Serine/threonine-protein kinase PAK 3 OS=Rattus no... [more]
PAK3_PONPY1.229e-1533.88Serine/threonine-protein kinase PAK 3 OS=Pongo pyg... [more]
PAK3_PANTR1.229e-1533.88Serine/threonine-protein kinase PAK 3 OS=Pan trogl... [more]
PAK3_MOUSE1.229e-1533.88Serine/threonine-protein kinase PAK 3 OS=Mus muscu... [more]
PAK3_HUMAN1.229e-1533.88Serine/threonine-protein kinase PAK 3 OS=Homo sapi... [more]
NEK4_ORYSJ1.229e-1529.65Serine/threonine-protein kinase Nek4 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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