FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: KRAF1_CAEEL (Raf homolog serine/threonine-protein kinase OS=Caenorhabditis elegans GN=lin-45 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  112 DIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAI-----LRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKL 477
            ++ A+ +  +Q+  G+ YLH  +  +IHRDLK +NIF+   +  +KIGD GLA +     + G QQ     G+  +MAPE+     +  Y    D+YSFG+C+ E+L+S  PYS  +N  QI   V  G L
Sbjct:  575 EMGAIIDILKQVSLGMNYLHSKN--IIHRDLKTNNIFLMDDMSTVKIGDFGLATVKTKWTVNGGQQQQQPTGSILWMAPEVIRMQDDNPYTPQSDVYSFGICMYEILSSHLPYSNINNRDQILFMVGRGYL 703          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CLA4_ASHGO (Serine/threonine-protein kinase CLA4 OS=Ashbya gossypii GN=CLA4 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.229e-15
Identity = 52/153 (33.99%), Postives = 85/153 (55.56%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELYEE-DYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCL-ENVSKRLPAKELLLDPF 588
            R+  +G+ +LH  D  +IHRD+K DN+ ++ H G++KI D G  A L   +   + ++GTP +MAPE+ ++ +Y+E VD++S G+  +EML  + PY        +Y   T+G        +   E +RF+  CL  +V  R   +ELL   F
Sbjct:  626 RETCQGLKFLH--DKHIIHRDIKSDNVLLDTH-GRVKITDFGFCAKLTDKRSKRATMVGTPYWMAPEVVKQREYDEKVDVWSLGIMTIEMLEGEPPYLNEEPLKALYLIATNGTPKLKHPELLSLEIKRFLSVCLCVDVRYRASTEELLHHSF 775          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K4_MOUSE (Mitogen-activated protein kinase kinase kinase 4 OS=Mus musculus GN=Map3k4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15
Identity = 64/207 (30.92%), Postives = 101/207 (48.79%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA-----HSVIGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSK-RLPAKELLLDPFL 591
            +R++   +++ R       E    GTL E  +   +  +  ++ + +QI   I  LH H   ++HRD+K  NIF+    G IK+GD G +  L+ + Q      +S +GT  +MAPE+      E +    DI+S G  V+EM+T   P+ E  +  QI  KV  G  P    R+   E + F+  CLE+  K R  A +LL   F+
Sbjct: 1392 VRYFG--VELHREEMYIFMEYCDEGTLEEVSRLGLQEHV--IRLYTKQITVAINVLHEHG--IVHRDIKGANIFLTSS-GLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERL-SPEGKAFLSHCLESDPKIRWTASQLLDHAFV 1590          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K4_HUMAN (Mitogen-activated protein kinase kinase kinase 4 OS=Homo sapiens GN=MAP3K4 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.605e-15
Identity = 64/207 (30.92%), Postives = 102/207 (49.28%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQA-----HSVIGTPEFMAPELYE----EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSK-RLPAKELLLDPFL 591
            +R++   +++ R       E    GTL E  +   +  +  ++ +++QI   I  LH H   ++HRD+K  NIF+    G IK+GD G +  L+ + Q      +S +GT  +MAPE+      E +    DI+S G  V+EM+T   P+ E  +  QI  KV  G  P    R+   E + F+  CLE+  K R  A +LL   F+
Sbjct: 1402 VRYFG--VELHREEMYIFMEYCDEGTLEEVSRLGLQEHV--IRLYSKQITIAINVLHEHG--IVHRDIKGANIFLTSS-GLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVITRAKGEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPERL-SPEGKDFLSHCLESDPKMRWTASQLLDHSFV 1600          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: STE20_CANAL (Serine/threonine-protein kinase CST20 OS=Candida albicans GN=CST20 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 56/159 (35.22%), Postives = 91/159 (57.23%), Query Frame = 1
Query:  139 RQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEA-----RRFVGKCLE-NVSKRLPAKELLLDPFL 591
            R+ L+G+ +LH     VIHRD+K DNI +N   G IKI D G  A +   + +  +++GTP +MAPE+   ++Y   VD++S G+ ++EML  + PY   +    +Y   T+G       +++D E+     R+F+  CL+ + +KR  A ELL D F+
Sbjct: 1053 RETLKGLKFLHSKG--VIHRDIKSDNILLNMD-GNIKITDFGFCAQINEINSKRITMVGTPYWMAPEIVSRKEYGPKVDVWSLGIMIIEMLEGEPPYLNETPLRALYLIATNGT-----PKLKDPESLSYDIRKFLAWCLQVDFNKRADADELLHDNFI 1203          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.096e-15
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 1
Query:   46 NFITEMFTSGTLREYRKKY---TRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGS-QQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKV 462
            + +TE  + G+L     K     ++D R   + A  + +G+ YLH  +PP++HRDLK  N+ V+     +K+ D GL+ +   +   + S  GTPE+MAPE L +E  NE  D+YSFG+ + E+ T   P+    NPAQ+   V
Sbjct:  622 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY-TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL-NPAQVVAAV 763          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y4251_DICDI (Probable serine/threonine-protein kinase DDB_G0284251 OS=Dictyostelium discoideum GN=DDB_G0284251 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 67/205 (32.68%), Postives = 103/205 (50.24%), Query Frame = 1
Query:   46 NFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLLDP-FLASDAGEPLLIPQVPSFQNLN 651
            NFI E   +G+LR+  +K+  +       +  Q+L+G+AYLH +   VIHRD+K  NI +    G IK+ D G+A+ I   SQ   SV+GTP +MAPE  E    +   DI+S G  ++E+LT + PY      A ++ ++ S + P     I       F     ++ ++R  A+ELL  P F       P L     + + LN
Sbjct:  109 NFILEYVENGSLRDVIEKFGPLSEELCIIYLYQMLQGLAYLHSN--KVIHRDIKASNILITKE-GVIKLADFGVASQIDSESQLRFSVVGTPYWMAPESIEISGCSSASDIWSLGSTMIELLTGNPPYYTLQPMAAMF-RIVSDQHPPFPTDISKEFLDYFQQSFKKDPTQRPTAQELLQHPIFFTLQKVPPTLSELQSTLKTLN 309          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: TAOK2_RAT (Serine/threonine-protein kinase TAO2 OS=Rattus norvegicus GN=Taok2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 1
Query:   70 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLL 579
            S  L  ++K    V+I AV + A   L+G+AYLH H+  +IHRD+K  NI ++   G +K+GD G A+I+     A+S +GTP +MAPE+     E  Y+  VD++S G+  +E+     P    +  + +Y  +   + P           R FV  CL+ + +  P  E+LL
Sbjct:  113 SDLLEVHKKPLQEVEIAAVTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 276          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: TAOK2_MOUSE (Serine/threonine-protein kinase TAO2 OS=Mus musculus GN=Taok2 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 57/174 (32.76%), Postives = 91/174 (52.30%), Query Frame = 1
Query:   70 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAKELLL 579
            S  L  ++K    V+I AV + A   L+G+AYLH H+  +IHRD+K  NI ++   G +K+GD G A+I+     A+S +GTP +MAPE+     E  Y+  VD++S G+  +E+     P    +  + +Y  +   + P           R FV  CL+ + +  P  E+LL
Sbjct:  113 SDLLEVHKKPLQEVEIAAVTHGA---LQGLAYLHSHN--MIHRDVKAGNILLS-EPGLVKLGDFGSASIMA---PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 276          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: NEK7_HUMAN (Serine/threonine-protein kinase Nek7 OS=Homo sapiens GN=NEK7 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.737e-15
Identity = 57/194 (29.38%), Postives = 97/194 (50.00%), Query Frame = 1
Query:    1 IRFYASWIDVDRRTFNFITEMFTSGTL----REYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRG-SQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYP-YSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP 561
            I++YAS+I+ +    N + E+  +G L    + ++K+   +  R V  +  Q+   + ++H     V+HRD+K  N+F+    G +K+GDLGL       +  AHS++GTP +M+PE ++E  YN   DI+S G  + EM     P Y +  N   + KK+     P         E R+ V  C+    ++ P
Sbjct:   95 IKYYASFIEDNE--LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR--VMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP 283          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
KRAF1_CAEEL1.229e-1537.40Raf homolog serine/threonine-protein kinase OS=Cae... [more]
CLA4_ASHGO1.229e-1533.99Serine/threonine-protein kinase CLA4 OS=Ashbya gos... [more]
M3K4_MOUSE1.605e-1530.92Mitogen-activated protein kinase kinase kinase 4 O... [more]
M3K4_HUMAN1.605e-1530.92Mitogen-activated protein kinase kinase kinase 4 O... [more]
STE20_CANAL2.096e-1535.22Serine/threonine-protein kinase CST20 OS=Candida a... [more]
CTR1_ARATH2.096e-1535.42Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
Y4251_DICDI2.737e-1532.68Probable serine/threonine-protein kinase DDB_G0284... [more]
TAOK2_RAT2.737e-1532.76Serine/threonine-protein kinase TAO2 OS=Rattus nor... [more]
TAOK2_MOUSE2.737e-1532.76Serine/threonine-protein kinase TAO2 OS=Mus muscul... [more]
NEK7_HUMAN2.737e-1529.38Serine/threonine-protein kinase Nek7 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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