FC930987

Overview
NameFC930987
Unique NameFC930987
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SLK_CAVPO (STE20-like serine/threonine-protein kinase OS=Cavia porcellus GN=SLK PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15
Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   85 EYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPEFMAPELY------EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQ-DAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPL 615
            E  +  T   I+ V    +Q L  + YLH  D  +IHRDLK  NI      G IK+ D G++A   R  Q+  S IGTP +MAPE+       +  Y+   D++S G+ ++EM   + P+ E  NP ++  K+   + P      +  +  + F+ KCLE NV  R    +LL  PF+  D+ +P+
Sbjct:  122 ELERPLTESQIQVV---CKQTLEALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTIDSNKPI 300          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK1_RAT (Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus GN=Pak1 PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15
Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V KR  AKELL   FL
Sbjct:  342 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 520          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK1_HUMAN (Serine/threonine-protein kinase PAK 1 OS=Homo sapiens GN=PAK1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15
Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V KR  AKELL   FL
Sbjct:  343 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 521          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: PAK1_BOVIN (Serine/threonine-protein kinase PAK 1 OS=Bos taurus GN=PAK1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15
Identity = 62/183 (33.88%), Postives = 94/183 (51.37%), Query Frame = 1
Query:   52 ITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHS-VIGTPEFMAPELY-EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLE-NVSKRLPAKELLLDPFL 591
            + E    G+L +   + T +D   +    R+ L+ + +LH +   VIHRD+K DNI + G  G +K+ D G  A +   Q   S ++GTP +MAPE+   + Y   VDI+S G+  +EM+  + PY   +    +Y   T+G           A  R F+ +CLE +V KR  AKELL   FL
Sbjct:  342 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILL-GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 520          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: MIL_AVIMH (Serine/threonine-protein kinase-transforming protein mil OS=Avian retrovirus MH2 GN=V-MIL PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  136 ARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILR---GSQQAHSVIGTPEFMAPELYE-EDYNELV---DIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQ---DAEARRFVGKCLENVSKRLP 561
            ARQ  +G+ YLH  +  +IHRD+K +NIF++G L  +KIGD GLA +     GSQQ     G+  +MAPE+   +D N      D+YS+G+ + E++T + PYS  +N  QI   V  G       ++        +R V  CL+ V +  P
Sbjct:  182 ARQTAQGMDYLHAKN--IIHRDMKSNNIFLHGGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERP 330          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15
Identity = 64/196 (32.65%), Postives = 97/196 (49.49%), Query Frame = 1
Query:   40 TFNFITEMFTSGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLA---AILRGSQQAHSVIGTPEFMAPE-LYEEDYNELVDIYSFGMCVLEMLTSDYPYS-ECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLP-AKELLLDPFLASDAGE 609
            T N + E    G++    +K+       V+ +  Q+L G+ YLH H   ++HRD+K  NI V+   G IK+ D G +   A L     A S+ GTP +MAPE + +  ++   DI+S G  V+EM+T   P+S +    A I+   T+   P     I  ++A  F+ KCL+      P A ELL  PF+     E
Sbjct:  145 TLNILLEFVPGGSISSLLEKFGAFPESVVRTYTNQLLLGLEYLHNH--AIMHRDIKGANILVDNQ-GCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPDNI-SSDANDFLLKCLQQEPNLRPTASELLKHPFVTGKQKE 336          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15
Identity = 50/128 (39.06%), Postives = 77/128 (60.16%), Query Frame = 1
Query:   49 FITEMFTSGTLRE-YRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELYE-EDYNELVDIYSFGMCVLEMLTSDYPYS 426
            FITE    G+L +    K  +++++  K  A QI +G+ YLH     VIHRD+K  N+ ++ H+  +KI D GL+ +   S +    IG+P +M+PEL   EDY E VD+Y+FG+ + E+ T + PYS
Sbjct:  735 FITEYLPGGSLYDALHSKKIKMNMQLYKKLAIQIAQGMNYLHLSG--VIHRDIKSLNLLLDEHMN-VKICDFGLSKLKSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTGELPYS 859          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: TAOK3_MOUSE (Serine/threonine-protein kinase TAO3 OS=Mus musculus GN=Taok3 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15
Identity = 62/189 (32.80%), Postives = 95/189 (50.26%), Query Frame = 1
Query:   70 SGTLREYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAAILRGSQQAHSVIGTPEFMAPELY----EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQDAEARRFVGKCLENVSKRLPAK-ELLLDPFLASDAGEPLLI 621
            S  L  ++K    V+I A+ + A   L+G+AYLH H   +IHRD+K  NI +    GQ+K+ D G A++   +  A+S +GTP +MAPE+     E  Y+  VDI+S G+  +E+     P    +  + +Y  +     P    R      RRFV  CL  + +  PA  ELL   F+  +    +LI
Sbjct:  109 SDLLEVHKKPLQEVEIAAITHGA---LQGLAYLHFHS--LIHRDIKAGNILLT-EPGQVKLADFGSASM---ASPANSFVGTPYWMAPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALY-HIAQNDSPTLQSREWTDSFRRFVDYCLHKIPQERPAAVELLRHDFIRRERPPKVLI 287          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SLK_RAT (STE20-like serine/threonine-protein kinase OS=Rattus norvegicus GN=Slk PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15
Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   85 EYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPEFMAPELY------EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQ-DAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPL 615
            E  +  T   I+ V    +Q L  + YLH  D  +IHRDLK  NI      G IK+ D G++A   R  Q+  S IGTP +MAPE+       +  Y+   D++S G+ ++EM   + P+ E  NP ++  K+   + P      +  +  + F+ KCLE NV  R    +LL  PF+  D+ +P+
Sbjct:  122 ELERPLTESQIQVV---CKQTLEALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPV 300          
BLAST of FC930987 vs. ExPASy Swiss-Prot
Match: SLK_MOUSE (STE20-like serine/threonine-protein kinase OS=Mus musculus GN=Slk PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.669e-15
Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   85 EYRKKYTRVDIRAVKNWARQILRGIAYLHGHDPPVIHRDLKCDNIFVNGHLGQIKIGDLGLAA-ILRGSQQAHSVIGTPEFMAPELY------EEDYNELVDIYSFGMCVLEMLTSDYPYSECSNPAQIYKKVTSGKLPGAFHRIQ-DAEARRFVGKCLE-NVSKRLPAKELLLDPFLASDAGEPL 615
            E  +  T   I+ V    +Q L  + YLH  D  +IHRDLK  NI      G IK+ D G++A   R  Q+  S IGTP +MAPE+       +  Y+   D++S G+ ++EM   + P+ E  NP ++  K+   + P      +  +  + F+ KCLE NV  R    +LL  PF+  D+ +P+
Sbjct:  122 ELERPLTESQIQVV---CKQTLEALNYLH--DNKIIHRDLKAGNILFTLD-GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL-NPMRVLLKIAKSEPPTLAQPSKWSSNFKDFLRKCLEKNVDARWTTSQLLQHPFVTVDSNKPV 300          
The following BLAST results are available for this feature:
BLAST of FC930987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
SLK_CAVPO3.575e-1532.80STE20-like serine/threonine-protein kinase OS=Cavi... [more]
PAK1_RAT3.575e-1533.88Serine/threonine-protein kinase PAK 1 OS=Rattus no... [more]
PAK1_HUMAN3.575e-1533.88Serine/threonine-protein kinase PAK 1 OS=Homo sapi... [more]
PAK1_BOVIN3.575e-1533.88Serine/threonine-protein kinase PAK 1 OS=Bos tauru... [more]
MIL_AVIMH3.575e-1536.18Serine/threonine-protein kinase-transforming prote... [more]
M3K2_ARATH3.575e-1532.65Mitogen-activated protein kinase kinase kinase 2 O... [more]
Y9955_DICDI4.669e-1539.06Probable serine/threonine-protein kinase DDB_G0267... [more]
TAOK3_MOUSE4.669e-1532.80Serine/threonine-protein kinase TAO3 OS=Mus muscul... [more]
SLK_RAT4.669e-1532.80STE20-like serine/threonine-protein kinase OS=Ratt... [more]
SLK_MOUSE4.669e-1532.80STE20-like serine/threonine-protein kinase OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC34100B10EF PostHarvP1 Citrus clementina cDNA clone C34100B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930987 ID=FC930987; Name=FC930987; organism=Citrus clementina; type=EST; length=734bp
ATTCGATTCTACGCGTCTTGGATTGATGTTGATCGAAGAACCTTCAATTT
CATCACTGAAATGTTCACCTCTGGCACCCTTAGAGAGTACAGGAAAAAGT
ACACGCGAGTGGATATTCGTGCGGTTAAGAACTGGGCACGACAAATTCTG
CGAGGAATTGCTTATCTGCACGGCCATGACCCTCCAGTGATACACAGAGA
CCTCAAATGTGATAACATTTTCGTCAATGGCCATCTTGGGCAAATCAAAA
TTGGAGATCTAGGCCTAGCAGCTATTCTCCGCGGCTCTCAGCAAGCTCAC
AGTGTTATAGGCACCCCTGAATTCATGGCCCCCGAATTGTACGAAGAGGA
TTATAATGAGCTAGTTGATATTTACTCCTTTGGCATGTGTGTGTTAGAAA
TGCTTACATCCGACTACCCATATAGCGAGTGCTCCAATCCTGCACAAATT
TACAAGAAAGTGACTTCGGGGAAATTGCCAGGAGCATTCCACAGAATTCA
AGATGCAGAGGCACGGCGTTTTGTGGGGAAATGTTTGGAGAATGTTTCAA
AAAGGTTACCAGCTAAAGAGCTCTTGCTCGACCCGTTTCTAGCTTCTGAT
GCAGGGGAGCCCTTGCTTATCCCACAAGTCCCAAGTTTTCAAAATTTAAA
TCCTAATGGAGCAGTGATGGAGCTAGTGCCAAAGTTTGCGGTTGATTCTG
ATCGAAGGAAGAGTACTGATATGACCATAACAGG
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