FC930988

Overview
NameFC930988
Unique NameFC930988
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.730e-33
Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  265 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L+ + A+ ++   LSE E+R LC  +KEI + + N+  +++P+ ICGDIHGQ+ DL  LF  GG  P+ NYLF+GDYVDR
Sbjct:   21 LEFRNARTVRQVQLSEAEIRSLCTASKEIFLHQPNLLELEAPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDR 100          

HSP 2 Score: 77.411 bits (189), Expect = 4.730e-33
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++YP+   +LRGNHE   I ++YGFYDEC R++ N  +WK  TD F+  P+ AL++
Sbjct:  104 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKTNTDCFNCLPVAALID 170          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP11_DROME (Serine/threonine-protein phosphatase alpha-1 isoform OS=Drosophila melanogaster GN=Pp1alpha-96A PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.155e-33
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  262 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            N+D  I++L++ +         LSE E+R LC K++EI + +  +  +++P+ ICGDIHGQ++DL  LF  GG  P++NYLF+GDYVDR
Sbjct:    6 NIDSIISRLLEVRGARPGKNVQLSESEIRSLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDR 94          

HSP 2 Score: 76.2554 bits (186), Expect = 6.155e-33
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++Y +   +LRGNHE   I ++YGFYDEC R+Y    +WK FTD F+  P+ A+V+
Sbjct:   98 SLETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVAAIVD 164          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP1_DICDI (Serine/threonine-protein phosphatase PP1 OS=Dictyostelium discoideum GN=pppB PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 6.157e-33
Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++YP+   ILRGNHE   I ++YGFYDEC R+Y N+ +WK FTD F+  P+ A+++
Sbjct:   96 SLETICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRY-NSKLWKAFTDCFNCLPVAAIID 162          

HSP 2 Score: 79.337 bits (194), Expect = 6.157e-33
Identity = 40/89 (44.94%), Postives = 60/89 (67.42%), Query Frame = 1
Query:  262 NLDEQIAQLMQ---CKP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            +LD  I +L++    KP     L+E+E+R L  +A EI +++  +  +++P+ ICGDIHGQ++DL  LF  GG  P +NYLF+GDYVDR
Sbjct:    4 DLDSIITRLLEPRTTKPGKLVDLAEEEIRYLTVQATEIFINQPILLELEAPIKICGDIHGQYYDLLRLFEYGGFPPQSNYLFLGDYVDR 92          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 8.015e-33
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 1
Query:  259 GNLDEQIAQLMQCKP-------LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            G L+  I +L++ +        LSE E++ LC  +++I + + N+  +++PV ICGDIHGQ+ DL  LF  GG  P++NYLF+GDYVDR
Sbjct:    4 GTLNSVINRLLEAREKPGKIVQLSETEIKQLCFVSRDIFLRQPNLLELEAPVKICGDIHGQYPDLLRLFEHGGYPPNSNYLFLGDYVDR 92          

HSP 2 Score: 80.8777 bits (198), Expect = 8.015e-33
Identity = 32/68 (47.06%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K+++P+   +LRGNHES  I ++YGFYDEC R++ +  +W+IFTD F+  P+ AL++
Sbjct:   96 SLETICLLLAYKIKFPENFFLLRGNHESASINRIYGFYDECKRRF-SVKIWRIFTDCFNCLPVAALID 162          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP13_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Arabidopsis thaliana GN=TOPP3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.044e-32
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L+E E++ LC  AK+I + + N+  +++P+ ICGD HGQF DL  LF  GG  P  NYLF+GDYVDR
Sbjct:   27 LTEAEIKHLCSTAKQIFLTQPNLLELEAPIKICGDTHGQFSDLLRLFEYGGYPPAANYLFLGDYVDR 93          

HSP 2 Score: 80.4925 bits (197), Expect = 1.044e-32
Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            SVET+ LL++ K++Y +   +LRGNHE   I ++YGFYDEC ++Y +  VWKIFTD F+  P+ AL++
Sbjct:   97 SVETICLLLAYKIKYKENFFLLRGNHECASINRIYGFYDECKKRY-SVRVWKIFTDCFNCLPVAALID 163          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP12_DROME (Serine/threonine-protein phosphatase alpha-2 isoform OS=Drosophila melanogaster GN=Pp1-87B PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.045e-32
Identity = 40/89 (44.94%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  262 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            N+D  I++L++ +         LSE E+R LC K++EI + +  +  +++P+ ICGDIHGQ++DL  LF  GG  P++NYLF+GDYVDR
Sbjct:    6 NIDSIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDR 94          

HSP 2 Score: 76.6406 bits (187), Expect = 1.045e-32
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++Y +   +LRGNHE   I ++YGFYDEC R+Y +  +WK FTD F+  P+ A+V+
Sbjct:   98 SLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-SIKLWKTFTDCFNCLPVAAIVD 164          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.359e-32
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++YP+   +LRGNHE   I ++YGFYDEC R+Y N  +WK FTD F+  P+ A+++
Sbjct:   99 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NVKLWKTFTDCFNCLPVAAIID 165          

HSP 2 Score: 79.337 bits (194), Expect = 1.359e-32
Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  262 NLDEQIAQLMQCKP--------LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            N+D  I +L++ +         ++E EVR LC K++EI + +  +  +++P+ ICGDIHGQ+ DL  LF  GG  P  NYLF+GDYVDR
Sbjct:    7 NVDSLIQRLLEMRSCRTGKQVQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAANYLFLGDYVDR 95          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP13_DROME (Serine/threonine-protein phosphatase alpha-3 isoform OS=Drosophila melanogaster GN=Pp1-13C PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.362e-32
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  262 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            NL+  I++L++ +         LSE E+R LC K++EIL+ +  +  +++P+ ICGDIHGQ++DL  LF  GG  P+ NYLF+GDYVDR
Sbjct:    6 NLESIISRLLEVRGARPGKNVQLSEGEIRGLCLKSREILLAQPILLELEAPLKICGDIHGQYYDLLRLFEYGGYPPEANYLFLGDYVDR 94          

HSP 2 Score: 76.2554 bits (186), Expect = 1.362e-32
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++Y +   +LRGNHE   I ++YGFYDEC R+Y    +WK FTD F+  P+ A+V+
Sbjct:   98 SLETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRY-TIKLWKTFTDCFNCLPVVAIVD 164          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.308e-32
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L+E E+R LC  ++EI + + N+  +++P+ ICGDIHGQ+ DL  LF  GG  P  NYLF+GDYVDR
Sbjct:   36 LNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPTANYLFLGDYVDR 102          

HSP 2 Score: 78.9518 bits (193), Expect = 2.308e-32
Identity = 31/68 (45.59%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++YP+   +LRGNHE   I ++YGFYDEC R++ +  +WK+FTD F+  P+ A+++
Sbjct:  106 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-SVRLWKVFTDSFNCLPVAAVID 172          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.912e-32
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            ++E E+R LC  +KE+ + + N+  +++P+ ICGD+HGQF DL  LF  GG  P  NYLF+GDYVDR
Sbjct:   27 ITETEIRQLCLASKEVFLSQPNLLELEAPIKICGDVHGQFPDLLRLFEYGGYPPAANYLFLGDYVDR 93          

HSP 2 Score: 77.7962 bits (190), Expect = 3.912e-32
Identity = 34/68 (50.00%), Postives = 49/68 (72.06%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ KV+Y     +LRGNHE   I +VYGFYDEC R+Y N  +WK FT+ F+  P++AL++
Sbjct:   97 SIETICLLLAYKVKYKFNFFLLRGNHECASINRVYGFYDECKRRY-NVRLWKTFTECFNCLPVSALID 163          
The following BLAST results are available for this feature:
BLAST of FC930988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP12_TOBAC4.730e-3348.75Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_DROME6.155e-3344.94Serine/threonine-protein phosphatase alpha-1 isofo... [more]
PP1_DICDI6.157e-3350.00Serine/threonine-protein phosphatase PP1 OS=Dictyo... [more]
PP17_ARATH8.015e-3343.82Serine/threonine-protein phosphatase PP1 isozyme 7... [more]
PP13_ARATH1.044e-3252.24Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP12_DROME1.045e-3244.94Serine/threonine-protein phosphatase alpha-2 isofo... [more]
PP1B_DROME1.359e-3248.53Serine/threonine-protein phosphatase beta isoform ... [more]
PP13_DROME1.362e-3246.07Serine/threonine-protein phosphatase alpha-3 isofo... [more]
PP12_ARATH2.308e-3252.24Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP16_ARATH3.912e-3250.75Serine/threonine-protein phosphatase PP1 isozyme 6... [more]

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Properties
Property NameValue
Genbank descriptionC34100B11EF PostHarvP1 Citrus clementina cDNA clone C34100B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930988 ID=FC930988; Name=FC930988; organism=Citrus clementina; type=EST; length=717bp
GAAAATGTTTGTTATTTTAGCCCATTTCTCTCTCTCTCTCTAAACACTGA
AGCCTTCTCTCTTTTTTTTTTTAAAATTTTTTTTTGAGATACAAAATTGA
ATTTTGATTATAGGGTTTCGAAAAAAATTAGGGTTTGTTTGTTGAAATTT
AGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCTGAGTCTGCA
AATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGGTCCCTTCAA
GTTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATGCAGTGCAAG
CCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGCCAAGGAGAT
ATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTGTTACAATTT
GTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTTTTCCGCATT
GGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGATTATGTTGA
CCGTGTTACTATTCAGTAGAAACTGTTACGCTTTTGGTATCTCTGAAAGT
GCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCATGAAAGTCGTC
AGATTACTCAGGTCTATGGATTCTATGATGAGTGCCTTAGGAAGTACGGC
AATGCAAATGTTTGGAAGATATTCACAGATTTATTTGACTATTTTCCACT
GACAGCATTGGTTGAAT
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