FC930988

Overview
NameFC930988
Unique NameFC930988
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP15_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.909e-31
Identity = 32/68 (47.06%), Postives = 51/68 (75.00%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++YP+   +LRGNHE   I ++YGFYDEC R++ N  +WK+FTD F+  P+ A+++
Sbjct:  106 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVKLWKVFTDTFNCLPVAAVID 172          

HSP 2 Score: 75.8702 bits (185), Expect = 1.909e-31
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L++ E+R LC  ++EI + +  +  + +PV ICGDIHGQ+ DL  LF  GG  P  NYLF+GDYVDR
Sbjct:   36 LNDSEIRQLCFVSREIFLQQPCLLELAAPVKICGDIHGQYSDLLRLFEYGGFPPAANYLFLGDYVDR 102          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP12_SCHPO (Serine/threonine-protein phosphatase PP1-2 OS=Schizosaccharomyces pombe GN=sds21 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 5.487e-31
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            LS+ E+R LC  ++ I + +  +  +++P+ ICGDIHGQ+ DL  LF  GG  PD NYLF+GDYVDR
Sbjct:   26 LSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDIHGQYSDLLRLFEYGGYPPDANYLFLGDYVDR 92          

HSP 2 Score: 75.8702 bits (185), Expect = 5.487e-31
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+E + LL + K++YP+   +LRGNHE   I ++YGFYDEC R+Y +  +WK FTD F+  P+ A+++
Sbjct:   96 SLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRY-SIKLWKTFTDCFNCMPVAAVID 162          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.213e-30
Identity = 33/68 (48.53%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K++YP+   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+  P+ AL++
Sbjct:   97 SLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVKLWKSFTDCFNCLPVAALID 163          

HSP 2 Score: 73.9442 bits (180), Expect = 1.213e-30
Identity = 32/67 (47.76%), Postives = 46/67 (68.66%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            LSE E++ LC  +++I + + N+   ++P+   GDIHGQ+ DL  LF  GG  P+ NYLF+GDYVDR
Sbjct:   27 LSESEIKQLCVASRDIFLKQPNLLESEAPIKTRGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDR 93          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PPQ1_YEAST (Serine/threonine-protein phosphatase PPQ OS=Saccharomyces cerevisiae GN=PPQ1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.852e-29
Identity = 32/68 (47.06%), Postives = 50/68 (73.53%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL+  K++Y     +LRGNHES  +T++YGFYDEC R+  ++ VWK+F D+F+  PL A+++
Sbjct:  337 SLETILLLLCYKIKYKDNFFMLRGNHESANVTKMYGFYDECKRRL-SSKVWKMFVDVFNTLPLAAIIQ 403          

HSP 2 Score: 73.1738 bits (178), Expect = 2.852e-29
Identity = 28/68 (41.18%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  301 PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            P    E++++C  A+EI +++  +  +++P+ + GD+HGQF+DL  + ++ G   DTNYLF+GDYVDR
Sbjct:  266 PFHSWEIQLICYHAREIFLNQPTLLRLQAPIKVVGDVHGQFNDLLRILKLSGVPSDTNYLFLGDYVDR 333          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP12_TRYBB (Serine/threonine-protein phosphatase PP1(5.9) OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.874e-29
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L+E EVR L  +++ + M +  +  + +PV ICGD+HGQ+ DL  LF +GG  PD NY+F+GDYVDR
Sbjct:   68 LTEAEVRWLVMESRALFMSQPMLVEIAAPVRICGDVHGQYTDLLRLFDLGGFPPDANYIFLGDYVDR 134          

HSP 2 Score: 74.3294 bits (181), Expect = 2.874e-29
Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K+ +P+   +LRGNHE   I ++YGF+DEC R+Y +  +WK FTD F+  P+  LVE
Sbjct:  138 SLETICLLLAYKLSFPETFFLLRGNHECSSINRIYGFFDECKRRY-SVRLWKQFTDTFNCMPVAGLVE 204          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP11_TRYBB (Serine/threonine-protein phosphatase PP1(4.8) OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.400e-28
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L+E EVR L  +++ + M +  +  + +PV ICGD+HGQ+ DL  LF +GG  PD NY+F+GDYVDR
Sbjct:   68 LTEAEVRWLVMESRALFMSQPMLVEIAAPVRICGDVHGQYTDLLRLFDLGGFPPDANYIFLGDYVDR 134          

HSP 2 Score: 72.0182 bits (175), Expect = 1.400e-28
Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+E + LL++ K+ +P+   +LRGNHE   I ++YGF+DEC R+Y +  +WK FTD F+  P+  LVE
Sbjct:  138 SLERICLLLAYKLSFPETFFLLRGNHECSSINRIYGFFDECKRRY-SVRLWKQFTDTFNCMPVAGLVE 204          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PPZ1_YEAST (Serine/threonine-protein phosphatase PP-Z1 OS=Saccharomyces cerevisiae GN=PPZ1 PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 5.177e-28
Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            S+ET+ LL   K++YP+   +LRGNHE   +T+VYGFYDEC R+  N  +WK F D F+  PL A+V
Sbjct:  455 SLETILLLFCYKIKYPENFFLLRGNHECANVTRVYGFYDECKRRC-NIKIWKTFIDTFNTLPLAAIV 520          

HSP 2 Score: 68.1662 bits (165), Expect = 5.177e-28
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L   E+  +C KA+EI + + ++  +  PV I GD+HGQ+ DL  LF   G  P +NYLF+GDYVDR
Sbjct:  385 LKNNEILQICIKAREIFLSQPSLLELSPPVKIVGDVHGQYGDLLRLFTKCGFPPSSNYLFLGDYVDR 451          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PPZ_SCHPO (Serine/threonine-protein phosphatase PP-Z OS=Schizosaccharomyces pombe GN=pzh1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.459e-27
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            S+ET+ LL   K+RYP+   +LRGNHE   IT+VYGFYDEC R+  N  +WK F + F+  P+ ++V
Sbjct:  284 SLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKRRC-NIKIWKTFINTFNCLPIASVV 349          

HSP 2 Score: 67.0106 bits (162), Expect = 9.459e-27
Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 1
Query:  262 NLDEQIAQLM---------QCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            N+DE I +L+         +   L   E+  +C   +EI + +  +  +  PV I GD+HGQ+ DL  LF + G  P +NYLF+GDYVDR
Sbjct:  191 NVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDVHGQYSDLIRLFEMCGFPPSSNYLFLGDYVDR 280          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PPY_DROME (Serine/threonine-protein phosphatase PP-Y OS=Drosophila melanogaster GN=PpY-55A PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.617e-26
Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            S+ET+ LL + KV+YP    +LRGNHES  I ++YGFYDE  R++    +W  FTD F++ P+ ALV
Sbjct:   96 SLETICLLFAYKVKYPLNFFLLRGNHESASINKIYGFYDEIKRRH-TVRLWHSFTDCFNWLPVAALV 161          

HSP 2 Score: 67.781 bits (164), Expect = 1.617e-26
Identity = 30/67 (44.78%), Postives = 45/67 (67.16%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L E+ +  L ++ +E++  +  +  +++PV ICGDIHGQF DL  +F+  G  P  NYLF+GDYVDR
Sbjct:   26 LKEELIERLIQQTREVIKWQPMLLELQAPVNICGDIHGQFTDLLRIFKACGFPPKANYLFLGDYVDR 92          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PPZ2_YEAST (Serine/threonine-protein phosphatase PP-Z2 OS=Saccharomyces cerevisiae GN=PPZ2 PE=1 SV=4)

HSP 1 Score: 78.5666 bits (192), Expect = 2.076e-26
Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            S+ET+ LL+  K++YP+   +LRGNHE   +T+VYGFYDEC R+  N  +WK F D F+  PL A+V
Sbjct:  490 SLETILLLLCYKIKYPENFFLLRGNHECANVTRVYGFYDECKRRC-NIKIWKTFVDTFNTLPLAAIV 555          

HSP 2 Score: 61.6178 bits (148), Expect = 2.076e-26
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            L   E+  +C KA+E+ + +  +  +   V I GD+HGQ+ DL  LF   G  P  NYLF+GDYVDR
Sbjct:  420 LKNSEIIQICHKARELFLAQPALLELSPSVKIVGDVHGQYADLLRLFTKCGFPPMANYLFLGDYVDR 486          
The following BLAST results are available for this feature:
BLAST of FC930988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP15_ARATH1.909e-3147.06Serine/threonine-protein phosphatase PP1 isozyme 5... [more]
PP12_SCHPO5.487e-3150.75Serine/threonine-protein phosphatase PP1-2 OS=Schi... [more]
PP13_TOBAC1.213e-3048.53Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PPQ1_YEAST2.852e-2947.06Serine/threonine-protein phosphatase PPQ OS=Saccha... [more]
PP12_TRYBB2.874e-2949.25Serine/threonine-protein phosphatase PP1(5.9) OS=T... [more]
PP11_TRYBB1.400e-2849.25Serine/threonine-protein phosphatase PP1(4.8) OS=T... [more]
PPZ1_YEAST5.177e-2850.75Serine/threonine-protein phosphatase PP-Z1 OS=Sacc... [more]
PPZ_SCHPO9.459e-2749.25Serine/threonine-protein phosphatase PP-Z OS=Schiz... [more]
PPY_DROME1.617e-2649.25Serine/threonine-protein phosphatase PP-Y OS=Droso... [more]
PPZ2_YEAST2.076e-2650.75Serine/threonine-protein phosphatase PP-Z2 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionC34100B11EF PostHarvP1 Citrus clementina cDNA clone C34100B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930988 ID=FC930988; Name=FC930988; organism=Citrus clementina; type=EST; length=717bp
GAAAATGTTTGTTATTTTAGCCCATTTCTCTCTCTCTCTCTAAACACTGA
AGCCTTCTCTCTTTTTTTTTTTAAAATTTTTTTTTGAGATACAAAATTGA
ATTTTGATTATAGGGTTTCGAAAAAAATTAGGGTTTGTTTGTTGAAATTT
AGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCTGAGTCTGCA
AATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGGTCCCTTCAA
GTTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATGCAGTGCAAG
CCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGCCAAGGAGAT
ATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTGTTACAATTT
GTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTTTTCCGCATT
GGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGATTATGTTGA
CCGTGTTACTATTCAGTAGAAACTGTTACGCTTTTGGTATCTCTGAAAGT
GCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCATGAAAGTCGTC
AGATTACTCAGGTCTATGGATTCTATGATGAGTGCCTTAGGAAGTACGGC
AATGCAAATGTTTGGAAGATATTCACAGATTTATTTGACTATTTTCCACT
GACAGCATTGGTTGAAT
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