FC930988

Overview
NameFC930988
Unique NameFC930988
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP1_BRANA (Serine/threonine-protein phosphatase PP1 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.661e-26
Identity = 36/68 (52.94%), Postives = 53/68 (77.94%), Query Frame = 3
Query:  513 SVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 716
            S+ET+ LL++ K+RYP +I +LRGNHE  +I ++YGFYDEC R++ N  +WKIFTD F+  P+ AL++
Sbjct:   38 SLETICLLLAYKIRYPSKIYLLRGNHEDAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVAALID 104          

HSP 2 Score: 52.7582 bits (125), Expect = 4.661e-26
Identity = 22/34 (64.71%), Postives = 25/34 (73.53%), Query Frame = 1
Query:  403 GDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            GDIHGQ+ DL  LF  GG  P  N+LF+GDYVDR
Sbjct:    1 GDIHGQYQDLLRLFEYGGYPPSANFLFLGDYVDR 34          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2B1_DROME (Serine/threonine-protein phosphatase 2B catalytic subunit 1 OS=Drosophila melanogaster GN=CanA1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.713e-25
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
Query:  319 VRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            +R++ E A  +L +E N+  V++P+T+CGDIHGQF DL +LF +GG    T YLF+GDYVDR
Sbjct:  102 LRIITEGAA-LLREEKNMIDVEAPITVCGDIHGQFFDLVKLFEVGGPPATTRYLFLGDYVDR 162          

HSP 2 Score: 63.1586 bits (152), Expect = 1.713e-25
Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L SLK+ YP  +++LRGNHE R +T+ + F  EC+ KY + +++    + FD  PL AL+
Sbjct:  164 YFSIECVLYLWSLKITYPTTLSLLRGNHECRHLTEYFTFKQECIIKY-SESIYDACMEAFDCLPLAALL 231          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2BA_RAT (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp3ca PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.718e-25
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  280 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            A LM+   L E     +  +   IL  E N+  + +PVT+CGDIHGQF DL +LF +GG   +T YLF+GDYVDR
Sbjct:   48 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 122          

HSP 2 Score: 61.2326 bits (147), Expect = 1.718e-25
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L +LK+ YP+ + +LRGNHE R +T+ + F  EC  KY +  V+    D FD  PL AL+
Sbjct:  124 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALM 191          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2BA_MOUSE (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Mus musculus GN=Ppp3ca PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.718e-25
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  280 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            A LM+   L E     +  +   IL  E N+  + +PVT+CGDIHGQF DL +LF +GG   +T YLF+GDYVDR
Sbjct:   48 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 122          

HSP 2 Score: 61.2326 bits (147), Expect = 1.718e-25
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L +LK+ YP+ + +LRGNHE R +T+ + F  EC  KY +  V+    D FD  PL AL+
Sbjct:  124 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALM 191          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2BA_HUMAN (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Homo sapiens GN=PPP3CA PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.718e-25
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  280 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            A LM+   L E     +  +   IL  E N+  + +PVT+CGDIHGQF DL +LF +GG   +T YLF+GDYVDR
Sbjct:   48 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 122          

HSP 2 Score: 61.2326 bits (147), Expect = 1.718e-25
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L +LK+ YP+ + +LRGNHE R +T+ + F  EC  KY +  V+    D FD  PL AL+
Sbjct:  124 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALM 191          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2BA_BOVIN (Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Bos taurus GN=PPP3CA PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.236e-25
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:  280 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            A LM+   L E     +  +   IL  E N+  + +PVT+CGDIHGQF DL +LF +GG   +T YLF+GDYVDR
Sbjct:   48 AHLMKEGRLEETVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDR 122          

HSP 2 Score: 61.2326 bits (147), Expect = 2.236e-25
Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L +LK+ YP+ + +LRGNHE R +T+ + F  EC  KY +  V+    D FD  PL AL+
Sbjct:  124 YFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALM 191          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2B3_DROME (Serine/threonine-protein phosphatase 2B catalytic subunit 3 OS=Drosophila melanogaster GN=CanA-14F PE=1 SV=4)

HSP 1 Score: 71.633 bits (174), Expect = 3.780e-25
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            + E     + ++   +L  E  +  +++PVT+CGDIHGQF+DL +LF IGG    T YLF+GDYVDR
Sbjct:  130 IEESAALRIIQEGATLLRTEKTMIDIEAPVTVCGDIHGQFYDLMKLFEIGGSPATTKYLFLGDYVDR 196          

HSP 2 Score: 64.3142 bits (155), Expect = 3.780e-25
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L SLK+ YPQ + +LRGNHE R +T+ + F  EC  KY +  V+    D FD  PL AL+
Sbjct:  198 YFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALM 265          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2B2_DROME (Serine/threonine-protein phosphatase 2B catalytic subunit 2 OS=Drosophila melanogaster GN=Pp2B-14D PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.921e-25
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDR 504
            + E     + +    +L  E  +  +++PVT+CGDIHGQF+DL +LF +GG    T YLF+GDYVDR
Sbjct:  122 IEEAPALKIIQDGAALLRQEKTMIDIEAPVTVCGDIHGQFYDLMKLFEVGGSPASTKYLFLGDYVDR 188          

HSP 2 Score: 64.3142 bits (155), Expect = 4.921e-25
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E V  L SLK+ YPQ + +LRGNHE R +T+ + F  EC  KY +  V+    D FD  PL AL+
Sbjct:  190 YFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDCLPLAALM 257          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: PP2BA_DICDI (Calcineurin subunit A OS=Dictyostelium discoideum GN=canA PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.083e-24
Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFR--IGGKCPDTNYLFMGDYVDR 504
            L+  +V  + + A EIL  E  +  V++P+T+CGD HGQF+DL ++F   IGG   +TNYLF+GDYVDR
Sbjct:  104 LNHDDVIEIVKMAAEILEKEPTLIQVEAPITVCGDTHGQFYDLIKIFENDIGGNPANTNYLFLGDYVDR 172          

HSP 2 Score: 62.7734 bits (151), Expect = 1.083e-24
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 3
Query:  507 YYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALV 713
            Y+S+E +  L + K+ YP    +LRGNHE R +T+ + F +ECL KY +  V+   T+ F+  PL AL+
Sbjct:  174 YFSMEVIIYLYACKINYPNTFFLLRGNHECRHLTEYFTFKEECLHKY-SEEVYDFITESFNALPLAALM 241          
BLAST of FC930988 vs. ExPASy Swiss-Prot
Match: BSL1_ORYSJ (Serine/threonine-protein phosphatase BSL1 homolog OS=Oryza sativa subsp. japonica GN=BSL1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.402e-24
Identity = 30/72 (41.67%), Postives = 50/72 (69.44%), Query Frame = 3
Query:  510 YSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN---VWKIFTDLFDYFPLTALVE 716
            +S+ET+TLL++LK+ YP+ + ++RGNHE+  I  ++GF  EC+ + G ++    W  F  LF+Y PL A++E
Sbjct:  627 HSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGESDGIWAWTRFNQLFNYLPLAAMIE 698          

HSP 2 Score: 60.8474 bits (146), Expect = 1.402e-24
Identity = 32/73 (43.84%), Postives = 41/73 (56.16%), Query Frame = 1
Query:  304 LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF------RIGGKCPDTNYLFMGDYVDR 504
            L   EV  LC  A++I M E  V  +K+P+ + GD+HGQF DL  LF         G     +YLF+GDYVDR
Sbjct:  552 LDSYEVGELCYAAEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDITYIDYLFLGDYVDR 624          
The following BLAST results are available for this feature:
BLAST of FC930988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
PP1_BRANA4.661e-2652.94Serine/threonine-protein phosphatase PP1 (Fragment... [more]
PP2B1_DROME1.713e-2553.23Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_RAT1.718e-2548.00Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_MOUSE1.718e-2548.00Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_HUMAN1.718e-2548.00Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_BOVIN2.236e-2548.00Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B3_DROME3.780e-2546.27Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2B2_DROME4.921e-2544.78Serine/threonine-protein phosphatase 2B catalytic ... [more]
PP2BA_DICDI1.083e-2449.28Calcineurin subunit A OS=Dictyostelium discoideum ... [more]
BSL1_ORYSJ1.402e-2441.67Serine/threonine-protein phosphatase BSL1 homolog ... [more]

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Properties
Property NameValue
Genbank descriptionC34100B11EF PostHarvP1 Citrus clementina cDNA clone C34100B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930988 ID=FC930988; Name=FC930988; organism=Citrus clementina; type=EST; length=717bp
GAAAATGTTTGTTATTTTAGCCCATTTCTCTCTCTCTCTCTAAACACTGA
AGCCTTCTCTCTTTTTTTTTTTAAAATTTTTTTTTGAGATACAAAATTGA
ATTTTGATTATAGGGTTTCGAAAAAAATTAGGGTTTGTTTGTTGAAATTT
AGGGTTAGGGTTAGATTAAAAAGAGGAAAGTGAAGGGATCTGAGTCTGCA
AATTAAGAAGAAGAAGGACAAGAAAATGAGCTTGGATTCGGTCCCTTCAA
GTTCACATGGAAATCTCGACGAGCAGATTGCTCAGCTTATGCAGTGCAAG
CCCTTATCGGAACAAGAGGTTAGAGTGTTATGCGAAAAGGCCAAGGAGAT
ATTGATGGATGAAAGTAATGTCCAGCCTGTAAAAAGTCCTGTTACAATTT
GTGGTGATATTCATGGACAATTTCATGATCTTGCAGAGCTTTTCCGCATT
GGAGGAAAGTGTCCAGATACAAACTACTTGTTCATGGGAGATTATGTTGA
CCGTGTTACTATTCAGTAGAAACTGTTACGCTTTTGGTATCTCTGAAAGT
GCGTTATCCTCAAAGGATTACTATTCTAAGGGGGAATCATGAAAGTCGTC
AGATTACTCAGGTCTATGGATTCTATGATGAGTGCCTTAGGAAGTACGGC
AATGCAAATGTTTGGAAGATATTCACAGATTTATTTGACTATTTTCCACT
GACAGCATTGGTTGAAT
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