FC931000

Overview
NameFC931000
Unique NameFC931000
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931000 vs. ExPASy Swiss-Prot
Match: FKBP3_BOVIN (FK506-binding protein 3 OS=Bos taurus GN=FKBP3 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 3 
Query:    3 ILKEGDAFERPNEGAFVKVKLIGKLQDGTVF-----VKKGHSEEEQLFEFKTDEEQVIDGLDRAVITMKKNEVALLTIAPEYAFGSAESQQELAVVPPNSTVHYEVELVSFE 323
            +LK+GD    P +G  V     G LQDGTVF           +  +   FK    +VI G D A++TM K E A L I PE+A+G  +  Q  A +PPN+ + +EVELV  +
Sbjct:  115 VLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSSKKKKNAKPLSFKVGIGKVIRGWDEALLTMSKGEKARLEIEPEWAYG--KKGQPDAKIPPNAKLIFEVELVDID 224
The following BLAST results are available for this feature:
BLAST of FC931000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
FKBP3_BOVIN5.342e-1138.39FK506-binding protein 3 OS=Bos taurus GN=FKBP3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34100C12EF PostHarvP1 Citrus clementina cDNA clone C34100C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931000 ID=FC931000; Name=FC931000; organism=Citrus clementina; type=EST; length=735bp
AGATTTTGAAAGAAGGGGATGCGTTTGAGCGCCCTAATGAAGGAGCTTTT
GTCAAAGTCAAATTGATTGGGAAGCTGCAAGATGGTACCGTGTTTGTGAA
AAAGGGTCATAGTGAGGAAGAGCAGCTGTTTGAGTTTAAGACAGATGAAG
AGCAAGTCATTGATGGGCTTGATAGAGCGGTGATTACAATGAAGAAAAAT
GAGGTTGCACTGCTGACAATAGCACCAGAGTATGCTTTTGGCTCGGCTGA
GTCGCAGCAGGAGCTGGCTGTAGTACCTCCTAATTCAACTGTGCATTATG
AGGTTGAGCTGGTGTCCTTTGAAAAGGAGAAGGAATCGTGGGACATGAAT
ACTGAGGAAAAGATTGAAGCCGCGGGGAAGAAGAAGGAACAAGGGAATAC
ATTGTTTAAGGCAGGCAAATATGCAAGAGCCTCAAAGAGATATGAGAAAG
CTGTCAAGTACATCGAGTATGATACTTCCTTTGGTGACGAAGAGAAAAAA
CAGGCAAAGGCATTGAAAGTTGCTTGCAATCTCAATAATGCTGCTTGCAA
ATTGAAACTCAAGGATTACAAGCAGGCAGAAAAATTATGCACCAAGGTGC
TTGACTTGGATAGTAGAAATGTGAAAGCTCTGTACAGAAGGGCTCAGGCA
TACATTCAGATGGCAGATTTAGATTTGGCAGAGTTTGATATCAGAAAGCA
CTTGAGATTGATCCTGATACAGGGATGTCAAGTTG
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