FC931007
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45 Identity = 85/175 (48.57%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 60 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 584 Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + + + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR +T+ ++ WL + R T+PN +++LIGNK DL V+ E+ K FAE+ L F+E SA NVE+AF E +IY+ + +++ Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 2.003e-45 Identity = 85/175 (48.57%), Postives = 121/175 (69.14%), Query Frame = 3 Query: 60 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVE 584 Y Y+FK ++IGD GVGKS LL +FT+ +F + TIGVEF TR + + + +K QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR +T+ ++ WL + R T+PN +++LIGNK DL V+ E+ K FAE+ L F+E SA NVE+AF E +IY+ + +++ Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLD 182
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.942e-45 Identity = 98/193 (50.78%), Postives = 127/193 (65.80%), Query Frame = 3 Query: 57 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAV--EAGSNGT-ASTLPSKG 626 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK+DL VST+ K FAE + F+ETSA +A NVE AF + QI K ++ V +AG T +PS G Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAPKAGVKLTPGQQVPSNG 196
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 9.942e-45 Identity = 96/194 (49.48%), Postives = 130/194 (67.01%), Query Frame = 3 Query: 57 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGT-ASTLPSKGETI 635 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ + N+ +L+GNK DL VS E GKA A++ + F+ETSA DATNVE AF +T +I ++ A + +N + +T+ +G+ + Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAF---MTMAGEIKNRMASQPATNASKPATVQMRGQPV 194
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.298e-44 Identity = 86/180 (47.78%), Postives = 123/180 (68.33%), Query Frame = 3 Query: 60 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 599 YDYLFKL+LIGDSGVGK+ LL RF+++ FN STIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F N+ W+R + EH ++ M++GNK D+ VS E G+ A + F+ETSA +TNVE AF + I ++++ ++ S+G Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSG 184
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.298e-44 Identity = 86/180 (47.78%), Postives = 123/180 (68.33%), Query Frame = 3 Query: 60 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 599 YDYLFKL+LIGDSGVGK+ LL RF+++ FN STIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F N+ W+R + EH ++ M++GNK D+ VS E G+ A + F+ETSA +TNVE AF + I ++++ ++ S+G Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSG 184
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.893e-44 Identity = 86/180 (47.78%), Postives = 122/180 (67.78%), Query Frame = 3 Query: 60 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNG 599 YDYLFKL+LIGDSGVGK+ LL RF+++ FN STIG++F R++ +D K +K QIWDTAGQER+R IT+AYYRGA+G +LVYD+T +F N+ W+R + EH ++ M++GNK D+ VS E G+ A + F+ETSA +TNVE AF + I ++++ ++ S G Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAG 184
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.893e-44 Identity = 96/204 (47.06%), Postives = 129/204 (63.24%), Query Frame = 3 Query: 57 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLKR 668 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV +WL+E+ + N+ +L+GNK+DL V K FA+ + F+ETSA +ATNVE AF + +I K + A S GE N+K DS+ +K+ Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAA------------SGGERPNLKIDSTPVKQ 195
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.778e-44 Identity = 91/179 (50.84%), Postives = 118/179 (65.92%), Query Frame = 3 Query: 57 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGS 593 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL+E+ + N+ +L+GNK DL V K FA+ + F+ETSA +ATNVE AF + +I K + A GS Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 182
BLAST of FC931007 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.778e-44 Identity = 96/203 (47.29%), Postives = 128/203 (63.05%), Query Frame = 3 Query: 57 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRSLRIDNKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHATFQNVGRWLRELREHTDPNIIVMLIGNKTDLRHLVAVSTEDGKAFAEQESLYFMETSALDATNVENAFTEVLTQIYKIVSKRAVEAGSNGTASTLPSKGETINVKDDSSVLK 665 EYDYLFKL+LIGDSGVGKS LL RF + + STIGV+F R++ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV +WL+E+ + N+ +L+GNK+DL V K FA+ + F+ETSA +ATNVE AF + +I K + A S GE N+K DS+ +K Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAA------------SGGERPNLKIDSTPVK 194 The following BLAST results are available for this feature:
BLAST of FC931007 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931007 ID=FC931007; Name=FC931007; organism=Citrus clementina; type=EST; length=747bpback to top |