FC931011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11 Identity = 38/115 (33.04%), Postives = 65/115 (56.52%), Query Frame = 3 Query: 63 RQTAGKRISCESFISNPS-------IYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADR 386 ++ G+ I+C+ S P+ + S LF+G +S+N D +++ E FAK+G V RI ET + +GFG+V FS +E+A A+ AL G+ + R VR+++++ R Sbjct: 232 KEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPR 346
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: HNRGT_MACFA (RNA-binding motif protein, X-linked-like-2 OS=Macaca fascicularis GN=RBMXL2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.059e-11 Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 KLF+GG++ D+ +L F KYG + E ++ DRET +SRGF FVTF + A +A + ++G+ L G+ ++V A Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDMNGKSLDGKAIKVAQA 84
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: HNRPG_PANTR (Heterogeneous nuclear ribonucleoprotein G OS=Pan troglodytes GN=RBMX PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11 Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 KLF+GG++ ++ +L F KYG + E ++ DRET +SRGF FVTF + +A A + ++G+ L G+ ++V A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.806e-11 Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 KLF+GG++ ++ +L F KYG + E ++ DRET +SRGF FVTF + +A A + ++G+ L G+ ++V A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: YOCE_SCHPO (Uncharacterized RNA-binding protein C4F6.14 OS=Schizosaccharomyces pombe GN=SPBC4F6.14 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 32/84 (38.10%), Postives = 52/84 (61.90%), Query Frame = 3 Query: 141 SSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADRNR 392 S+S LFV +++ + L F+ G + A ++ + ETG +RG+GFVTFS +E+A A + L + LHGR +R+++A R R Sbjct: 3 SNSTLFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQRAAKELKNKKLHGRILRLDFATPRKR 86
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: RMXL3_PANTR (RNA-binding motif protein, X-linked-like-3 OS=Pan troglodytes GN=RBMXL3 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 30/73 (41.10%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV 368 KLFVGG++ D+ +L+ F KYG++ + +I DR+T +SRGF FVTF + +A +A + ++G+ L G+ + V Sbjct: 9 KLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKAIMV 81
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: RBM23_HUMAN (Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADR 386 +L+VG + +N+ ++ LR F +G ++ ++ D +TGRS+G+GF+TFS E A A++ L+G +L GR +RV + +R Sbjct: 264 RLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTER 342
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: NUCL_XENLA (Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = 3 Query: 144 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 S LFV G+S + + +L+EAF G VN ARI+ DR+TG S+GFGFV FST E+A +A +A++ ++ G +V +++A Sbjct: 502 SKTLFVRGLSEDTTEETLKEAFD--GSVN-ARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFA 576
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: GAR2_SCHPO (Protein gar2 OS=Schizosaccharomyces pombe GN=gar2 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 3.081e-11 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADR 386 +FVG +S+N+DD L + F +YG + AR+I+D ++GRS+G+G+V F T E A +A+ A +++ GR V ++ + R Sbjct: 265 VFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAVAANGTKEIDGRMVNLDLSNPR 342
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: ROA3_RAT (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus GN=Hnrnpa3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA----LDGQDLHGRR 359 KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A +DG+ + +R Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKR 109 The following BLAST results are available for this feature:
BLAST of FC931011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931011 ID=FC931011; Name=FC931011; organism=Citrus clementina; type=EST; length=495bpback to top |