FC931011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: ROA3_MOUSE (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus GN=Hnrnpa3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA----LDGQDLHGRR 359 KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A +DG+ + +R Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKR 109
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: ROA3_HUMAN (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens GN=HNRNPA3 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 34/74 (45.95%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQA----LDGQDLHGRR 359 KLF+GG+S+ D+SLRE F K+G + + ++ D +T RSRGFGFVT+S VEE +A+ A +DG+ + +R Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKR 109
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.024e-11 Identity = 31/81 (38.27%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 147 SKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADRN 389 + ++V I+ + D+ R F KYG V + + D+ETG+SRGFGFV F++ E+AS A+Q L+ ++ HG+ + V A ++ Sbjct: 242 TNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKH 322
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: TIAR_MOUSE (Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 30/75 (40.00%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 +FVG +S + ++ AFA +G +++AR++ D TG+S+G+GFV+F +A +AI + GQ L GR++R N+A Sbjct: 116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 190
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: TIAR_HUMAN (Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 30/75 (40.00%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 +FVG +S + ++ AFA +G +++AR++ D TG+S+G+GFV+F +A +AI + GQ L GR++R N+A Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA 173
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 29/74 (39.19%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVN 371 +L+VG I N++++ LR ++G + A ++ D+ +GRSR FGFVT TVE+A++ I+ L+ ++ GR+++VN Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVN 158
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L+VGG++ +DD L AF +G + + +I LD ET + RGF FV F E+A++AI ++ +L GR +RVN A Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L+VGG++ +DD L AF +G + + +I LD ET + RGF FV F E+A++AI ++ +L GR +RVN A Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L+VGG++ +DD L AF +G + + +I LD ET + RGF FV F E+A++AI ++ +L GR +RVN A Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.256e-11 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L+VGG++ +DD L AF +G + + +I LD ET + RGF FV F E+A++AI ++ +L GR +RVN A Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLA 82 The following BLAST results are available for this feature:
BLAST of FC931011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931011 ID=FC931011; Name=FC931011; organism=Citrus clementina; type=EST; length=495bpback to top |