FC931011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus GN=Tra2b PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L V G+S + LRE F+KYG + + I+ D+++ RSRGF FV F V++A A + +G +L GRR+RV+++ Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: TRA2B_MOUSE (Transformer-2 protein homolog beta OS=Mus musculus GN=Tra2b PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L V G+S + LRE F+KYG + + I+ D+++ RSRGF FV F V++A A + +G +L GRR+RV+++ Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: TRA2B_HUMAN (Transformer-2 protein homolog beta OS=Homo sapiens GN=TRA2B PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L V G+S + LRE F+KYG + + I+ D+++ RSRGF FV F V++A A + +G +L GRR+RV+++ Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: TRA2B_BOVIN (Transformer-2 protein homolog beta OS=Bos taurus GN=TRA2B PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 L V G+S + LRE F+KYG + + I+ D+++ RSRGF FV F V++A A + +G +L GRR+RV+++ Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFS 194
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: HNRPG_RAT (Heterogeneous nuclear ribonucleoprotein G OS=Rattus norvegicus GN=Rbmx PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYA 377 KLF+GG++ ++ +L F KYG + E ++ DRET +SRGF FVTF + +A + ++G+ L G+ ++V A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 144 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADRN 389 S+K+FVGGI +N + LRE F K+G V E +I D E R RGFGF+TF + A+ + D+ G++V V A R+ Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVEVKRAEPRD 192
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 3 Query: 144 SSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADRN 389 S+K+FVGGI +N + LRE F K+G V E +I D E R RGFGF+TF + A+ + D+ G++V V A R+ Sbjct: 112 SNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVN-MHFHDIMGKKVEVKRAEPRD 192
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: CSTF2_PONAB (Cleavage stimulation factor 64 kDa subunit OS=Pongo abelii GN=CSTF2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 102 ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV-NYAADRNR 392 + +P++ +++R +FVG I Y + L++ F++ G V R++ DRETG+ +G+GF + E A SA++ L+G++ GR +RV N A+++N+ Sbjct: 6 VRDPAVDRSLR-----SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: CSTF2_MOUSE (Cleavage stimulation factor 64 kDa subunit OS=Mus musculus GN=Cstf2 PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 102 ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV-NYAADRNR 392 + +P++ +++R +FVG I Y + L++ F++ G V R++ DRETG+ +G+GF + E A SA++ L+G++ GR +RV N A+++N+ Sbjct: 6 VRDPAVDRSLR-----SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: CSTF2_HUMAN (Cleavage stimulation factor 64 kDa subunit OS=Homo sapiens GN=CSTF2 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 102 ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV-NYAADRNR 392 + +P++ +++R +FVG I Y + L++ F++ G V R++ DRETG+ +G+GF + E A SA++ L+G++ GR +RV N A+++N+ Sbjct: 6 VRDPAVDRSLR-----SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98 The following BLAST results are available for this feature:
BLAST of FC931011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931011 ID=FC931011; Name=FC931011; organism=Citrus clementina; type=EST; length=495bpback to top |