FC931011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: CSTF2_BOVIN (Cleavage stimulation factor 64 kDa subunit OS=Bos taurus GN=CSTF2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.864e-11 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 102 ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV-NYAADRNR 392 + +P++ +++R +FVG I Y + L++ F++ G V R++ DRETG+ +G+GF + E A SA++ L+G++ GR +RV N A+++N+ Sbjct: 6 VRDPAVDRSLR-----SVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: RMXL3_HUMAN (RNA-binding motif protein, X-linked-like-3 OS=Homo sapiens GN=RBMXL3 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 28/73 (38.36%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 150 KLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV 368 KLF+GG++ D+ +L+ F KYG++ + ++ DR+T +SRGF FVTF + +A +A + ++G+ L G+ + V Sbjct: 9 KLFIGGLNLKTDEKALKAEFGKYGHIIKVFLMKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKAIMV 81
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: EIF3G_YARLI (Eukaryotic translation initiation factor 3 subunit G OS=Yarrowia lipolytica GN=TIF35 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 3 Query: 153 LFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRVNYAADRN 389 L V +S D+ LR F KYG +N + DR+TGR RGF FVT++ A +A++A+DG ++V+Y+ RN Sbjct: 216 LRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQAALEAMDGHGFDNLIMKVDYSKKRN 294
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: CSTFT_MOUSE (Cleavage stimulation factor 64 kDa subunit, tau variant OS=Mus musculus GN=Cstf2t PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 102 ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV-NYAADRNR 392 + +P++ +++R +FVG I Y + L++ F++ G V R++ DRETG+ +G+GF + E A SA++ L+G++ GR +RV N A+++N+ Sbjct: 6 VRDPAMDRSLR-----SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98
BLAST of FC931011 vs. ExPASy Swiss-Prot
Match: CSTFT_HUMAN (Cleavage stimulation factor 64 kDa subunit, tau variant OS=Homo sapiens GN=CSTF2T PE=1 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11 Identity = 33/98 (33.67%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 102 ISNPSIYQAIRCMSSSKLFVGGISYNMDDNSLREAFAKYGYVNEARIILDRETGRSRGFGFVTFSTVEEASSAIQALDGQDLHGRRVRV-NYAADRNR 392 + +P++ +++R +FVG I Y + L++ F++ G V R++ DRETG+ +G+GF + E A SA++ L+G++ GR +RV N A+++N+ Sbjct: 6 VRDPAMDRSLR-----SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNK 98 The following BLAST results are available for this feature:
BLAST of FC931011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931011 ID=FC931011; Name=FC931011; organism=Citrus clementina; type=EST; length=495bpback to top |