FC931015

Overview
NameFC931015
Unique NameFC931015
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.859e-70
Identity = 126/242 (52.07%), Postives = 164/242 (67.77%), Query Frame = 2
Query:    5 SVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            S E  LG+DF ++Y  S L++RNK LI ELS P PG+SDL+F +++SQPF TQ  AC WKQ+WSYWRNP Y A+R   T  IA+ FG ++WD G K S+ QDL N  G+MY+  +FLG  N+ SV PV+ VERTV+YRE+AAGM++A+PYA AQV                   +MIGF+W + KF   F+ M+ +F+ FT +GMM VA+TP   VA+IV  FF +VWNLFSGF+V R  IP
Sbjct: 1112 SQEMALGVDFTDLYKKSDLYRRNKALIDELSVPRPGTSDLHFDSEFSQPFWTQCMACLWKQHWSYWRNPAYTAVRLIFTTFIALIFGTMFWDIGTKVSRNQDLVNAMGSMYAAVLFLGVQNSSSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVLIEIPYIFVQATVYGLIVYSMIGFEWTVAKFFWDFFFMFFTFLYFTFFGMMTVAVTPNQNVASIVAGFFYTVWNLFSGFIVPRPRIP 1353          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.505e-69
Identity = 123/243 (50.62%), Postives = 165/243 (67.90%), Query Frame = 2
Query:    2 ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            IS E  LG++FAEVY +S L++RNK+LIKELSTPPPGS DL+F T++SQ F+ Q  AC WKQ+ SYWRNP Y A R   T+VIA+ FG I+WD G+K S   DL N  G+MY+  +F+G  NA +V P++ VERTV+YRE+AAGM++A+PYA AQV                   +MIGF W   KF  + + M+ +F+ FT YGMM VA+TP   +A IV + F ++WN+F+GF++ R  IP
Sbjct: 1116 ISQEEILGLNFAEVYRNSDLYKRNKDLIKELSTPPPGSKDLFFATQFSQSFVMQCLACLWKQHKSYWRNPSYTATRLFFTVVIALIFGTIFWDLGKKRSTSLDLINAMGSMYAAVLFIGIQNAQTVQPIVDVERTVFYREKAAGMYSALPYAYAQVLIEVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIP 1358          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.051e-67
Identity = 122/243 (50.21%), Postives = 166/243 (68.31%), Query Frame = 2
Query:    2 ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            ++ E+ LGI+FAEVY +S L+QRNK LI ELSTPPPGS+DL+FPT++SQPF TQ  AC WKQ+ SYWRNP Y A R   T VIA+ FG I+ + G+K +K+ DL N  G+MY+  +F+G  N  +V P++ VERTV+YRE+AAGM++A+PYA AQV                   ++IGF W + KF  + + M+ +F+ FT YGMM VA+TP   +A IV + F  +WN+F+GFL+ R  IP
Sbjct: 1119 LAQEDILGINFAEVYRNSDLYQRNKTLISELSTPPPGSTDLHFPTQFSQPFFTQCMACLWKQHKSYWRNPSYTATRIFFTTVIALIFGTIFLNLGKKINKRLDLFNSLGSMYAAVLFIGIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKFFWYMFFMFFTFMYFTFYGMMAVAMTPNSDIAAIVSTAFYCIWNIFAGFLIPRPRIP 1361          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.882e-65
Identity = 115/243 (47.33%), Postives = 161/243 (66.26%), Query Frame = 2
Query:    2 ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            ++ E +L +DFAE+Y  S+LHQRNK L+KELS PP G+SDLYF T++SQ    QF++C WKQ+W+YWR+P YN +RF  TL  ++  G ++W  G   S   DL  + GA+Y+  IF+G +N  +V P++ VERTV+YRERAAGM++AMPYA++QV                   AM+GF+W+  KF  F ++ + SF+ +T YGMM V+LTP   VA+I  S F  ++NLFSGF + R  IP
Sbjct: 1140 LAAELKLSVDFAELYNQSALHQRNKALVKELSVPPAGASDLYFATQFSQNTWGQFKSCLWKQWWTYWRSPDYNLVRFIFTLATSLLIGTVFWQIGGNRSNAGDLTMVIGALYAAIIFVGINNCSTVQPMVAVERTVFYRERAAGMYSAMPYAISQVTCELPYVLIQTVYYSLIVYAMVGFEWKAEKFFWFVFVSYFSFLYWTYYGMMTVSLTPNQQVASIFASAFYGIFNLFSGFFIPRPKIP 1382          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.132e-64
Identity = 114/240 (47.50%), Postives = 157/240 (65.42%), Query Frame = 2
Query:   11 ENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            E +L IDFAE Y  S++HQR K L+KELS PPPGS DLYFP++YSQ    QF+ C WKQ+W+YWR+P YN +R    L  A+  G I+W  G K    +DL  + G+MY+  +F+G  N+++V PV+ VERTV+YRERAAGM++A+PYALAQV                    M+ F+W   KF  FFY+ + +F+ FT YGMM V+++P   VA+I+ + F +++NLFSGF + R  IP
Sbjct: 1184 EVRLEIDFAEYYRSSTMHQRTKALVKELSNPPPGSDDLYFPSQYSQSTFNQFKLCLWKQWWTYWRSPDYNLVRIFFALFTALMLGTIFWRVGHKMESSKDLLVIIGSMYAAVLFVGFENSVTVQPVVAVERTVFYRERAAGMYSAIPYALAQVVVEIPYVFVETVIYTLIVYPMMSFQWTPAKFFWFFYVSFFTFLYFTYYGMMNVSVSPNLQVASILGAAFYTLFNLFSGFFIPRPKIP 1423          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.397e-64
Identity = 119/243 (48.97%), Postives = 158/243 (65.02%), Query Frame = 2
Query:    2 ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            ++ E +L IDFAE Y  SSL+Q+NK L+KELSTPP G+SDLYF T++SQ  L QF++C WKQ+ +YWR P YN  RF  TL  A+  G I+W  G K     DL  + GAMY+  +F+G +N+ SV P+I VER+V+YRERAA M++A+PYALAQV                   AM+ F+W L KF  F+++ + SF+ FT YGMM VALTP   VA +    F  ++NLFSGF++ R  IP
Sbjct: 1087 MAAEAKLEIDFAEHYKTSSLYQQNKNLVKELSTPPQGASDLYFSTRFSQSLLGQFKSCLWKQWITYWRTPDYNLARFFFTLAAAVMLGSIFWKVGTKRENANDLTKVIGAMYAAVLFVGVNNSSSVQPLIAVERSVFYRERAAEMYSALPYALAQVVCEIPYVLIQTTYYTLIIYAMMCFEWTLAKFFWFYFVSFMSFLYFTYYGMMTVALTPNQQVAAVFAGAFYGLFNLFSGFVIPRPRIP 1329          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 7.049e-64
Identity = 114/243 (46.91%), Postives = 158/243 (65.02%), Query Frame = 2
Query:    2 ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            ++ E +L +DFAE Y  S L+++NK L+ +LS P PG+SDL+FPTKYSQ  + QFRAC WKQ+ +YWR+P YN +RF  TL  A+  G I+W  G K      L+ + GAMY+  +F+G +N  +V P++ +ERTV+YRERAAGM++AMPYA+AQV                   AM+ F+W   KF  FF++ + SF+ FT YGMM VA++P   VA I  + F S++NLFSGF + R  IP
Sbjct: 1172 VAAEVRLNMDFAEYYKTSDLYKQNKVLVNQLSQPEPGTSDLHFPTKYSQSTIGQFRACLWKQWLTYWRSPDYNLVRFSFTLFTALLLGTIFWKIGTKMGNANSLRMVIGAMYTAVMFIGINNCATVQPIVSIERTVFYRERAAGMYSAMPYAIAQVVMEIPYVFVQTAYYTLIVYAMMSFQWTAAKFFWFFFVSYFSFLYFTYYGMMTVAISPNHEVAAIFAAAFYSLFNLFSGFFIPRPRIP 1414          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 9.206e-64
Identity = 111/243 (45.68%), Postives = 163/243 (67.08%), Query Frame = 2
Query:    2 ISVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            ++ E +LG+DFAE+Y  S+L QRNK L++ELS PP G++DLYF T++SQ    QF++C WKQ+W+YWR+P YN +RF  TL  ++  G ++W  G K S  QDL  + GA+Y+  +F+G +N  +V P++ VERTV+YRE+AAGM++A+PYA++QV                   +M+GF+W+  KF  F ++ + SF+ +T YGMM V+LTP   VA+I  S F  ++NLFSGF + R  IP
Sbjct: 1113 LAAELKLGVDFAELYKASALCQRNKALVQELSVPPQGATDLYFATQFSQNTWGQFKSCLWKQWWTYWRSPDYNLVRFIFTLATSLMIGSVFWQIGGKRSNVQDLTMVIGAIYAAVVFVGINNCSTVQPMVAVERTVFYREKAAGMYSAIPYAISQVTCELPYVLIQTTYYSLIIYSMVGFEWKASKFLWFIFINYFSFLYWTYYGMMTVSLTPNQQVASIFASAFYGIFNLFSGFFIPRPKIP 1355          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.962e-62
Identity = 114/240 (47.50%), Postives = 159/240 (66.25%), Query Frame = 2
Query:   11 ENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            E +L IDFAEVYA+S+L++ N+ELIK+LS PPPG  DL FPTKYSQ FL Q  A  WKQ+ SYW++P YNA+R+ MTL+  + FG ++W +G+      DL NL GA Y+   FLG +N ++++PV+ VERTV+YRE+AAGM++ + YA AQ                    +MIG++W+  KF  F + M A+F  FTL+ MM+VA T    +A +++SF LS WN F+GF++ R  IP
Sbjct: 1128 EARLDIDFAEVYANSALYRSNQELIKQLSVPPPGFQDLSFPTKYSQNFLNQCVANTWKQFQSYWKDPPYNAMRYVMTLLYGLVFGTVFWRRGKNIESVNDLNNLLGATYAAVFFLGAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTLFSMMLVACTASEMLAAVLVSFVLSSWNNFAGFIIPRPLIP 1367          
BLAST of FC931015 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.962e-62
Identity = 114/242 (47.11%), Postives = 160/242 (66.12%), Query Frame = 2
Query:    5 SVENQLGIDFAEVYADSSLHQRNKELIKELSTPPPGSSDLYFPTKYSQPFLTQFRACFWKQYWSYWRNPQYNAIRFGMTLVIAIFFGLIYWDKGQKTSKQQDLQNLFGAMYSICIFLGTSNAISVIPVICVERTVYYRERAAGMFAAMPYALAQVAXXXXXXXXXXXXXXXXXXAMIGFKWELGKFCLFFYLMWASFIIFTLYGMMIVALTPGXAVATIVLSFFLSVWNLFSGFLVARSDIP 730
            S E  + IDFAEVY +S+LH+ N+EL+K+LS PP GS DL+FPT++SQ    QF+ CFWKQYWSYWR+P YN +R    L  ++  GL++WDKG+K   QQ + ++FGAM++  IF G +N+ SV+P +  ER+V YRER AGM+A+  YALAQVA                   MIG+ W   K   +FY M+ + + FT  GMM+V++TP   VA I+ S F +++NLF+GFL+ ++ IP
Sbjct: 1121 SSEADISIDFAEVYKNSALHKNNEELVKKLSFPPAGSKDLHFPTRFSQNGWGQFKTCFWKQYWSYWRSPSYNLMRSLHMLFASLVSGLLFWDKGKKLDNQQSVFSVFGAMFTAVIFCGINNSSSVLPYVTTERSVLYRERFAGMYASWAYALAQVAIEIPYLLAQALAFTVITYPMIGYYWSAYKVFWYFYSMFCTLLYFTYLGMMLVSMTPSFPVAAILQSSFYTMFNLFAGFLMPKAQIP 1362          
The following BLAST results are available for this feature:
BLAST of FC931015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
PDR1_NICPL3.859e-7052.07Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
TUR2_SPIPO9.505e-6950.62Pleiotropic drug resistance protein TUR2 OS=Spirod... [more]
PDR7_ORYSJ1.051e-6750.21Putative pleiotropic drug resistance protein 7 OS=... [more]
AB36G_ARATH4.882e-6547.33ABC transporter G family member 36 OS=Arabidopsis ... [more]
PDR15_ORYSJ4.132e-6447.50Pleiotropic drug resistance protein 15 OS=Oryza sa... [more]
AB29G_ARATH5.397e-6448.97ABC transporter G family member 29 OS=Arabidopsis ... [more]
PDR12_ORYSJ7.049e-6446.91Pleiotropic drug resistance protein 12 OS=Oryza sa... [more]
AB35G_ARATH9.206e-6445.68ABC transporter G family member 35 OS=Arabidopsis ... [more]
PDR5_ORYSJ2.962e-6247.50Pleiotropic drug resistance protein 5 OS=Oryza sat... [more]
PDR3_TOBAC2.962e-6247.11Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]

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Properties
Property NameValue
Genbank descriptionC34100E04EF PostHarvP1 Citrus clementina cDNA clone C34100E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931015 ID=FC931015; Name=FC931015; organism=Citrus clementina; type=EST; length=731bp
CATTTCAGTTGAGAATCAACTGGGAATTGATTTTGCTGAAGTTTATGCTG
ATTCATCGCTTCATCAGAGGAATAAGGAACTTATCAAAGAGCTTAGTACT
CCACCACCTGGCTCGTCAGATCTCTACTTCCCAACCAAATACTCTCAACC
ATTTTTAACCCAATTTAGGGCTTGTTTCTGGAAACAGTATTGGTCTTATT
GGAGAAACCCTCAGTACAATGCTATCCGATTTGGCATGACTCTTGTCATT
GCCATTTTCTTTGGTTTAATCTACTGGGACAAAGGACAGAAGACTTCCAA
ACAACAAGATCTGCAGAATCTTTTTGGAGCTATGTATTCTATTTGTATTT
TCCTTGGAACCAGCAATGCCATATCCGTGATACCCGTTATCTGCGTTGAG
AGAACAGTATACTACCGTGAAAGAGCCGCAGGGATGTTTGCTGCAATGCC
TTATGCACTTGCTCAAGTAGCCGTAGAGATAATATATGTATCAGTTCAAA
GTGTTGTGTATGTTCTTATCCTTTACGCGATGATTGGATTCAAGTGGGAG
CTGGGAAAATTCTGCTTGTTCTTCTACCTCATGTGGGCGTCTTTTATCAT
TTTCACATTGTACGGAATGATGATTGTCGCATTGACTCCTGGCCNAGCAG
TTGCTACCATTGTCTTGTCCTTCTTCCTTAGTGTATGGAACTTGTTCTCC
GGTTTCCTCGTTGCCAGATCGGATATTCCTG
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