FC931020

Overview
NameFC931020
Unique NameFC931020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.507e-20
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP-------------------LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKK 411
            YGFRK+DPD+WEFANE F+RGQ+HLLK+I RRKP H H+ Q   P                     E  +   E ++ERLK++ +                +  +Q + +RL+ +E RQ QM++ LA  + +PGF +   QQ    +K+
Sbjct:   98 YGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGNAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDNQLQGMVQRLQGMELRQQQMMSFLAKAVNRPGFLAQFVQQQNESNKR 246          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.580e-20
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP-------------------LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKK 411
            YGFRK+DPD+WEFANE F+RGQ+HLLK+I RRKP H H+ Q   P                     E  +   E ++ERLK++ +                +  +Q + +RL+ +E RQ QM++ LA  +  PGF +   QQ    +K+
Sbjct:  100 YGFRKVDPDRWEFANEGFLRGQKHLLKSISRRKPAHGHAQQQQQPHGHAQQQMQPPGHSASVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQGMVQRLQGMELRQQQMMSFLAKAVNSPGFLAQFVQQQNESNKR 248          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.020e-19
Identity = 55/149 (36.91%), Postives = 82/149 (55.03%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPL--------TETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSAL--------NQQAEVHSKKRRL 420
            YGFRK+DPD+WEFANE F+RG++ LLK+I RRKP H    Q  T +         E  +   E ++ERLK++ +                E  +Q+V ++++ +E RQ QM++ LA  ++ PGF + L        N+Q    +KKRRL
Sbjct:   86 YGFRKVDPDRWEFANEGFLRGRKQLLKSIVRRKPSHVQQNQQQTQVQSSSVGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATENQLQNVGQKVQVMEQRQQQMMSFLAKAVQSPGFLNQLVQQNNNDGNRQIPGSNKKRRL 234          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 53/150 (35.33%), Postives = 82/150 (54.67%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVH---------SHS---TQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRRLLRPTT 435
            YGFRK+DPD+WEFANE F+RGQ+HLL++I RRKP H          HS     S +   E  +   E ++ERLK++ +                +  +Q++ +RL+ +ENRQ Q+++ LA  ++ P F S   QQ    ++  R +  T+
Sbjct:   96 YGFRKVDPDRWEFANEGFLRGQKHLLQSITRRKPAHGQGQGHQRSQHSNGQNSSVSACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMENRQQQLMSFLAKAVQSPHFLSQFLQQQNQQNESNRRISDTS 245          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA3_ARATH (Heat stress transcription factor A-3 OS=Arabidopsis thaliana GN=HSFA3 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.638e-19
Identity = 51/121 (42.15%), Postives = 70/121 (57.85%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHST-QSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSAL 381
            YGFRKID D+WEFANE F+RG++HLLKNIHRR+   S+ T  S T  ++    E   +IE+L+KE              +     HV +V +RL+  E RQ Q+++ LA L +  GF   L
Sbjct:  114 YGFRKIDTDKWEFANEAFLRGKKHLLKNIHRRRSPQSNQTCCSSTSQSQGSPTEVGGEIEKLRKERRALMEEMVELQQQSRGTARHVDTVNQRLKAAEQRQKQLLSFLAKLFQNRGFLERL 234          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica GN=HSFA2E PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSH-STQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVH-------SKKRR 417
            YGFRK+DPD+WEFANE F+RGQ+HLLK+I RRKP +S  S QS     E     +E +I++LK++                  +  +Q++ ++L+  E +Q  M+A L+ ++  P F   L  Q+E+        SKKRR
Sbjct:   97 YGFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSLGSFLEVGHFGYEGEIDQLKRDKHLLMAEVVKLRQEQQNTKSDLQAMEQKLQGTEQKQQHMMAFLSRVMHNPEFIRQLFSQSEMRKELEEFVSKKRR 236          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana GN=HSFA2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18
Identity = 53/137 (38.69%), Postives = 75/137 (54.74%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPV---HSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRRLL 423
            YGFRKIDPD+WEFANE F+ GQ+HLLKNI RR+ +   + +   S     E  +  F+ ++ERLK+++              H  +  V ++ +RL   E RQ QM+  LA  L  P F     QQ  V SK+++ L
Sbjct:  103 YGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEVERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNPNFV----QQFAVMSKEKKSL 235          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica GN=HSFA2D PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.599e-18
Identity = 66/208 (31.73%), Postives = 104/208 (50.00%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVH--SHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQ-------AEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPALNLEQIDRLESSVDFWTFFLYGLGEAFNQDV 618
            YGFRKIDPD+WEFAN+ F+RGQRHLLK I RR+P+     S Q+     E  +   + +I+RLK++ +                + +++++ ERL++ E +Q QM+  LA  ++ P F   L  Q        +  SKK    R  +I+    +    +S  +Q E+     DP P   L   +  +S ++     + GLG+   QDV
Sbjct:   96 YGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPGSQQALGTCLEVGQFGLDEEIDRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQKQVQMMGFLARAMQNPDFFHQLIHQQDKMKGLEDTFSKK----RTRSIDIVPFLNPGEVSQGDQLES-TLLFDPRPFAELND-EPAKSELENLALNIQGLGKG-KQDV 296          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17
Identity = 57/178 (32.02%), Postives = 88/178 (49.44%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP-----------------LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQ---AEVH----SKKRRLLRPTTIEYFDDVKSASLSVNE 483
            YGFRK+DPD+WEFANE F+RGQ+HLLK I RRK V  H + S  P                   E  +   E ++E+LK++ +                +  +Q + + L+ +E RQ Q+++ LA  ++ P F S   Q+   + +H    +KKRRL   +T     +  S SL  ++
Sbjct:  111 YGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNPTFLSQFIQKQTDSNMHVTEANKKRRLREDSTAATESNSHSHSLEASD 288          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFC1_ARATH (Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 62/178 (34.83%), Postives = 84/178 (47.19%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGF-------SSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKE---NPDATSDPSPA 525
            YGFRK+DPD+WEFANE F+RGQ+HLL NI RRK       Q      + E  E   +IERLK+E                E E  +Q +  R+   E R  QM+A L  +++ P              QQ +V  KK+R +  +T      VKS    V E +       ++S PSP+
Sbjct:   76 YGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGMYGQ------DLEDGEIVREIERLKEE--------------QRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDLLPRMMLEKERTKQQQQVSDKKKRRVTMST------VKSEEEEVEEDEGRVFRVMSSSTPSPS 227          
The following BLAST results are available for this feature:
BLAST of FC931020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
HSF8_SOLLC3.507e-2035.57Heat shock factor protein HSF8 OS=Solanum lycopers... [more]
HSF8_SOLPE4.580e-2035.57Heat shock factor protein HSF8 OS=Solanum peruvian... [more]
HFA1B_ARATH1.020e-1936.91Heat stress transcription factor A-1b OS=Arabidops... [more]
HFA1D_ARATH2.273e-1935.33Heat stress transcription factor A-1d OS=Arabidops... [more]
HSFA3_ARATH8.638e-1942.15Heat stress transcription factor A-3 OS=Arabidopsi... [more]
HFA2E_ORYSJ2.513e-1837.86Heat stress transcription factor A-2e OS=Oryza sat... [more]
HSFA2_ARATH5.599e-1838.69Heat stress transcription factor A-2 OS=Arabidopsi... [more]
HFA2D_ORYSJ5.599e-1831.73Heat stress transcription factor A-2d OS=Oryza sat... [more]
HFA1A_ARATH1.629e-1732.02Heat stress transcription factor A-1a OS=Arabidops... [more]
HSFC1_ARATH1.056e-1634.83Heat stress transcription factor C-1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC34100E09EF PostHarvP1 Citrus clementina cDNA clone C34100E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931020 ID=FC931020; Name=FC931020; organism=Citrus clementina; type=EST; length=708bp
CTGGCCGGGGGAGCTGAATAATATGGATTCAGGAAGATTGATCCTGATCA
GTGGGAGTTTGCAAATGAGGAATTCATACGAGGACAGAGGCATCTCTTAA
AGAACATTCACAGACGCAAGCCAGTTCACAGCCATTCCACGCAGTCTCCC
ACTCCACTAACCGAAACGGAAAGAAATGAATTCGAGGCCAAAATTGAGAG
ACTCAAAAAGGAGAATAGCTTACTTCAATTAGAGCTGCGGAGGCGTGAGG
GTGGAAATCACGAGTTTGAGTATCATGTTCAATCAGTACGCGAGCGTCTA
AGGTACTTGGAAAATCGACAGACGCAAATGATCGCCTGTTTAGCTAACCT
GTTGAAGAAACCGGGATTTTCCTCGGCTCTTAATCAACAAGCAGAAGTTC
ACAGCAAAAAGAGAAGGCTGTTGAGGCCTACGACTATTGAATACTTTGAT
GATGTAAAATCCGCAAGCCTAAGTGTGAATGAACAGAAAGAGAACCCAGA
TGCTACTTCTGATCCATCTCCGGCGTTGAATTTGGAACAAATTGACAGGC
TAGAATCCTCAGTGGACTTTTGGACATTTTTTTTGTACGGCCTTGGGGAA
GCTTTTAATCAAGATGTGTACGATTTTGGGGTATTACGACCAGTGTCTGC
TGTCACCGATGATGAAATTGAAGAGGGTGTGTCATCAGAAGAACACGATG
TGTTATCA
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