FC931020

Overview
NameFC931020
Unique NameFC931020
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14989 contig Ccv1_Contig14989:312..1019. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA2A_ORYSJ (Heat stress transcription factor A-2a OS=Oryza sativa subsp. japonica GN=HSFA2A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 76/258 (29.46%), Postives = 108/258 (41.86%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHS-------------HSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSAL-NQQAEVHSKKRRLL-------RPTTIEYF--------DDVKSASLSVNEQKENPDATSDPSPALNLEQIDRLESSVDFWTFFL-YGLGEAFNQDVYDFGVLRPVSAVTDDEIEEGVSSEEHDVL 705
            YGFRK+DPD+WEFANE F+RG++ LLK I RR+P  S             H  Q      E  +   +  + RL+++ S                   +Q++ ER+   E +Q QM   LA  +K PGF   L ++QA  H  + R+L       R   IEY            +SA++   +    PD  + P            ES   FW   L  GL E   +D    GV    S   D + +E    ++ DVL
Sbjct:  112 YGFRKVDPDRWEFANEGFLRGKKELLKTIKRRRPPPSSPPSSSSSSSSSQHQQQPAAACLEVGQFGRDGVVNRLQRDKSVLIAEVVKLRQEQQTTRAQMQAMEERISAAEQKQQQMTVFLARAMKNPGFLQMLVDRQAGQHGARNRVLEDALSKKRRRPIEYLLTRNGETCAAGESAAMLAADGVAEPDGDTTPRGDGGGGGGGDTES---FWMQLLSLGLEEKQREDGVAGGVQESNSGGADVDNDEEDDDDDVDVL 366          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA6B_ARATH (Heat stress transcription factor A-6b OS=Arabidopsis thaliana GN=HSFA6b PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 45/136 (33.09%), Postives = 73/136 (53.68%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLT-----------ETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAE 396
            YGFRK++PD+WEFANE F+RGQ+HLLKNI RRK   ++S Q   P +           E  R   + +++ L+++                  + ++  + E+L+  E++Q QM++ LA  ++ P F   L +Q E
Sbjct:  120 YGFRKVNPDRWEFANEGFLRGQKHLLKNIRRRK-TSNNSNQMQQPQSSEQQSLDNFCIEVGRYGLDGEMDSLRRDKQVLMMELVRLRQQQQSTKMYLTLIEEKLKKTESKQKQMMSFLARAMQNPDFIQQLVEQKE 254          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA9_ORYSJ (Heat stress transcription factor A-9 OS=Oryza sativa subsp. japonica GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTE--------TERNE------FEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRR 417
            YGFRK+ PD+WE+ANE FI GQ+HLLK I RRK     S +SP+ + +        TE  E       E ++E LK++ +                   VQ++ ERL+ +E  Q QM+A LA +++ P F   LNQ  +   ++RR
Sbjct:  108 YGFRKVHPDRWEWANEGFIMGQKHLLKTIKRRK---KSSQESPSEIQKAPVKTAPGTENIEIGKYGGLEKEVETLKRDKALLMQQLVDLRHYQQTSNLEVQNLIERLQVMEQNQQQMMALLAIVVQNPSF---LNQLVQQQQQQRR 247          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSF30_SOLPE (Heat shock factor protein HSF30 OS=Solanum peruvianum GN=HSF30 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 53/166 (31.93%), Postives = 80/166 (48.19%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPV-HSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSK---------KRRLLRPTTIEYFDDVKSASLSVNEQK 489
            YGFRK+DPD+WEFANE F+ GQ+HLLK I RR+ V  S + Q      E      E ++ERLK++ +                   + ++ E++   E +Q QM++ LA +   P F      + +VH K         KRRL    ++   D   + S S+ E +
Sbjct:   90 YGFRKVDPDRWEFANEGFLGGQKHLLKTIKRRRNVGQSMNQQGSGACIEIGYYGMEEELERLKRDKNVLMTEIVKLRQQQQSTRNQIIAMGEKIETQERKQVQMMSFLAKIFSNPTFLQQYLDK-QVHRKDKQRIEVGQKRRLTMTPSVTGSDQPMNYSSSLQESE 254          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA3_ORYSJ (Heat stress transcription factor A-3 OS=Oryza sativa subsp. japonica GN=HSFA3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.686e-14
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSAL---NQQAEVHSK--KRRLLRPTTIEYFDDVKSASLSVNEQKENPDATSDPSPALNLEQID 546
            YGFRK+  D+WEFA+E+F+R  +HLLK I RR+   S + QS      +  +  + ++  L++E S            + +    + ++ +RL   E+RQ QM++ LA LL+ P F   L    QQ E+ S   KR+ L+       D  +S+S    E   +   TS   PA + + +D
Sbjct:  126 YGFRKVHADRWEFAHEDFLRHSKHLLKKIVRRR--SSPTQQSGLQPGSSGESGLDPELNTLRREKSALLQEVTRLKQEHLQTIEQMSTLNQRLESAEDRQKQMVSFLAKLLQNPTFLRQLKMHRQQKEIDSTRVKRKFLKHVPHGNIDSGESSSQHTGESNLDFSPTSLDLPATHSDILD 303          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA6A_ORYSJ (Putative heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6A PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.406e-14
Identity = 50/137 (36.50%), Postives = 66/137 (48.18%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP-LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGF--SSALNQQAEVHSKKRRLL 423
            YGFRK+  D+WEFANE+F+ GQRHLL NI RR+      T S TP          E ++ERL+++                E    +  +  R+R  E RQ Q    LA  L+ P    + A    A V  KKRR+L
Sbjct:  103 YGFRKVSADRWEFANEDFLGGQRHLLANIRRRR--RGAGTGSTTPRAVNCGGGGGEGEVERLRRDKEALARELARLRRQQQEARAQLLDMERRVRGTERRQEQCTEFLARALRSPDVLDNIARRHAAAVERKKRRML 237          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA6A_ARATH (Heat stress transcription factor A-6a OS=Arabidopsis thaliana GN=HSFA6A PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 41/123 (33.33%), Postives = 63/123 (51.22%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQ 390
            YGF+KID ++WEFANE F++G+RHLLKNI RRK      TQS            E +I  L+++                  + ++  + E+L+  E +Q  M+  L   +KKP F  +L ++
Sbjct:   78 YGFKKIDTERWEFANEHFLKGERHLLKNIKRRKTSSQTQTQS-----------LEGEIHELRRDRMALEVELVRLRRKQESVKTYLHLMEEKLKVTEVKQEMMMNFLLKKIKKPSFLQSLRKR 189          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HSFA9_ARATH (Heat stress transcription factor A-9 OS=Arabidopsis thaliana GN=HSFA9 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13
Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR-KPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASLSVNEQKE 492
            YGF+K+D D+WEFANE F  G++HLLKNI RR K     + ++ T  TETE       +E LK+E S              E ++ + +V+E++  ++  Q  M++  A L K   F   L        KKR++     +E  + VK   L  +++ +
Sbjct:  130 YGFKKVDSDRWEFANEGFQGGKKHLLKNIKRRSKNTKCCNKEASTTTTETE-------VESLKEEQSPMRLEMLKLKQQQEESQHQMVTVQEKIHGVDTEQQHMLSFFAKLAKDQRFVERL-------VKKRKMKIQRELEAAEFVKKLKLLQDQETQ 273          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA7A_ARATH (Heat stress transcription factor A-7a OS=Arabidopsis thaliana GN=HSFA7A PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQAEVHSKK 411
            YGFRKI+ ++WEFANEEF+ GQR LLKNI RR P    S+ S     E  R +    +E +                     + +++++ +R+   E +Q QM++ LA  ++ P F   L +Q +   K+
Sbjct:   88 YGFRKIEAERWEFANEEFLLGQRQLLKNIKRRNPFTPSSSPSHDACNELRREKQVLMMEIVSLRQQ------------QQTTKSYIKAMEQRIEGTERKQRQMMSFLARAMQSPSFLHQLLKQRDKKIKE 205          
BLAST of FC931020 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12
Identity = 53/195 (27.18%), Postives = 91/195 (46.67%), Query Frame = 1
Query:   22 YGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR---KPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGF-----SSALNQQAEVHSKKRRLLRPTTIEYFDDVKSASL---SVNEQKENPDATS-------DPSPALNLEQIDRL 552
            YGFRK+ PD+WEFANE F+ GQ+HLLKNI RR   KP+     ++   +    + E   ++  LK++ +             +  +  + ++ E +R +E RQ Q I   A +L  P F      + +N+     + KR+ L     ++ D   +  +   SV E   +P +T        + +P  N + I+ +
Sbjct:  154 YGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRRVSKPLVDSQLRNKASVV-FGQPEAPGEVVSLKRDRAALRAEVIMLKQQYNACKSQLIAMEEMVRNIERRQQQTIGFFAKVLTNPAFVQQVLLNYVNKNGLRGAAKRQRLMENEEQHADSPLNKGMEAASVMEADVSPGSTGCGTVGKVETTPMCNFQNIENM 347          
The following BLAST results are available for this feature:
BLAST of FC931020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
HFA2A_ORYSJ3.072e-1629.46Heat stress transcription factor A-2a OS=Oryza sat... [more]
HFA6B_ARATH2.601e-1533.09Heat stress transcription factor A-6b OS=Arabidops... [more]
HSFA9_ORYSJ3.397e-1536.30Heat stress transcription factor A-9 OS=Oryza sati... [more]
HSF30_SOLPE7.567e-1531.93Heat shock factor protein HSF30 OS=Solanum peruvia... [more]
HSFA3_ORYSJ1.686e-1431.11Heat stress transcription factor A-3 OS=Oryza sati... [more]
HFA6A_ORYSJ6.406e-1436.50Putative heat stress transcription factor A-6a OS=... [more]
HFA6A_ARATH1.864e-1333.33Heat stress transcription factor A-6a OS=Arabidops... [more]
HSFA9_ARATH3.179e-1331.65Heat stress transcription factor A-9 OS=Arabidopsi... [more]
HFA7A_ARATH1.578e-1232.31Heat stress transcription factor A-7a OS=Arabidops... [more]
HFA6B_ORYSJ5.996e-1227.18Heat stress transcription factor A-6a OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC34100E09EF PostHarvP1 Citrus clementina cDNA clone C34100E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931020 ID=FC931020; Name=FC931020; organism=Citrus clementina; type=EST; length=708bp
CTGGCCGGGGGAGCTGAATAATATGGATTCAGGAAGATTGATCCTGATCA
GTGGGAGTTTGCAAATGAGGAATTCATACGAGGACAGAGGCATCTCTTAA
AGAACATTCACAGACGCAAGCCAGTTCACAGCCATTCCACGCAGTCTCCC
ACTCCACTAACCGAAACGGAAAGAAATGAATTCGAGGCCAAAATTGAGAG
ACTCAAAAAGGAGAATAGCTTACTTCAATTAGAGCTGCGGAGGCGTGAGG
GTGGAAATCACGAGTTTGAGTATCATGTTCAATCAGTACGCGAGCGTCTA
AGGTACTTGGAAAATCGACAGACGCAAATGATCGCCTGTTTAGCTAACCT
GTTGAAGAAACCGGGATTTTCCTCGGCTCTTAATCAACAAGCAGAAGTTC
ACAGCAAAAAGAGAAGGCTGTTGAGGCCTACGACTATTGAATACTTTGAT
GATGTAAAATCCGCAAGCCTAAGTGTGAATGAACAGAAAGAGAACCCAGA
TGCTACTTCTGATCCATCTCCGGCGTTGAATTTGGAACAAATTGACAGGC
TAGAATCCTCAGTGGACTTTTGGACATTTTTTTTGTACGGCCTTGGGGAA
GCTTTTAATCAAGATGTGTACGATTTTGGGGTATTACGACCAGTGTCTGC
TGTCACCGATGATGAAATTGAAGAGGGTGTGTCATCAGAAGAACACGATG
TGTTATCA
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