FC931023

Overview
NameFC931023
Unique NameFC931023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_LACLA (Cell division protease ftsH homolog OS=Lactococcus lactis subsp. lactis GN=ftsH PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.675e-64
Identity = 125/229 (54.59%), Postives = 166/229 (72.49%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFS--GNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLE 681
            ASRVRDLFE AK  A  I+FIDEIDAV           NDEREQT+NQLL EMDGF   GNS VIV+AATNR DVLD ALLRPGRFDR+V V  PDV GR  +L+VH++ K LA DVD   ++ +TPG+ GADL+N++NEAA++AAR++ KEI+  +I + ++R +AGP KK+ + S  ++++VAYHEAGHA+VG ++     V K++++PRG+ GG     P EE ++
Sbjct:  271 ASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLVEMDGFQDDGNS-VIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMREREIVAYHEAGHAIVGLVLENGSTVRKVTVVPRGRIGGYMLALPDEEIMQ 498          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.313e-64
Identity = 116/225 (51.56%), Postives = 165/225 (73.33%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEER 675
            A RVR++F++A+  A  I+FIDE+DAV           NDEREQT+NQ+L EMDG + N+G++++ ATNR DVLD ALLRPGRFDR +TV  PD+  R +IL++HS+GK L+K++ F+KI++RTPG++GA L+N++NEA++L+ R     I   +I +A++R++AGP KK+ V+S E+ K VAYHEAGHA+VG  +   + V KI+IIPRG AGG     P EE+
Sbjct:  290 AKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPAKKSRVISQEELKAVAYHEAGHAVVGLKVKGGNKVQKITIIPRGNAGGYNLMTPEEEK 514          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.126e-63
Identity = 122/221 (55.20%), Postives = 157/221 (71.04%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 663
            A RVRDLF KAK  A CI+FIDEID+V               EQT+NQLL EMDGF+  +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+  R  ILQVH++ K L+  +    +++RTPGF+GA L+N++NEA +LA R +   I+ ++I +A++R+IAGP KK+ VVSD  +KLVAYHEAGHALVG  +   D V KI+IIPRGQAGG T   P
Sbjct:  306 AKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKSRVVSDADRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTP 526          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.191e-63
Identity = 121/221 (54.75%), Postives = 157/221 (71.04%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAP 663
            A RVRDLF KAK  A CI+FIDEID+V               EQT+NQLL EMDGF+  +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+  R  IL+VH+  K L+  +    +++RTPGF+GA L+N++NEA +LA R +   I+ ++I +A++R+IAGP KK+ V+SDE +KLVAYHEAGHALVG  +   D V KI+IIPRGQAGG T   P
Sbjct:  309 AKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTININDIDEAIDRVIAGPAKKSRVISDEDRKLVAYHEAGHALVGLHVHSNDEVQKITIIPRGQAGGYTLSTP 529          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_HELPJ (Cell division protease ftsH homolog OS=Helicobacter pylori J99 GN=ftsH PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.327e-61
Identity = 126/228 (55.26%), Postives = 164/228 (71.93%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXX-NDEREQTINQLLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 675
            ASRVRDLFE AK +A  I+FIDEIDA+            NDEREQT+NQLL EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD  GRV+IL+VH +G  LA DV+ +++++ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG EKK+  +S ++KK+VAYHE+GHA++  +      V K+SIIPRG A  G T   P E +
Sbjct:  248 ASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENK 475          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_HELPY (Cell division protease ftsH homolog OS=Helicobacter pylori GN=ftsH PE=1 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.264e-61
Identity = 126/228 (55.26%), Postives = 164/228 (71.93%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXX-NDEREQTINQLLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 675
            ASRVRDLFE AK +A  I+FIDEIDA+            NDEREQT+NQLL EMDGF S N+ VIVLAATNRP++LD AL+RPGRFDRQV VD+PD  GRV+IL+VH +G  LA DV+ +++++ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG EKK+  +S ++KK+VAYHE+GHA++  +      V K+SIIPRG A  G T   P E +
Sbjct:  248 ASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 475          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_TREPA (Cell division protease ftsH homolog OS=Treponema pallidum GN=ftsH PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.862e-61
Identity = 119/226 (52.65%), Postives = 164/226 (72.57%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRG-QAGGLTFFAPSEER 675
            ASRVRDLF++A+ KA  I+FIDE+DA+           NDEREQT+NQLL EMDGF   +G+I+LAATNRPDVLD ALLRPGRFDRQV VDRPD+ GR  IL++H++   LA +VD + ++R T G++GADL N++NEAA+LA R    ++ + ++ +A+E+ + G +KK+ V+ +E+++++AYHE GHAL G      D V KI+IIPRG  A G TF  P ++R
Sbjct:  219 ASRVRDLFKQAREKAPGIIFIDELDAIGKSRLNAIHS-NDEREQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAALLAVRSGRAQVIETDLDEAVEKTMIGLQKKSRVIREEERRIIAYHETGHALAGTFTKGADKVHKITIIPRGTSALGYTFHIPEDDR 443          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_HELFE (Cell division protease ftsH homolog OS=Helicobacter felis GN=ftsH PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.043e-61
Identity = 127/228 (55.70%), Postives = 163/228 (71.49%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXX-NDEREQTINQLLTEMDGF-SGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAG-GLTFFAPSEER 675
            ASRVRDLF+ AK +A  I+FIDEIDA+            NDEREQT+NQLL EMDGF S N+ VIVLAATNRP++LD ALLRPGRFDRQV VD+PD  GRV+IL+VH +   LA DVD ++I++ T G  GADL N++NEAA+LA R + KE+ +  + +A+ER IAG EKK+  +S ++KK+VAYHE+GHA++  +      V K+SIIPRG A  G T   P E +
Sbjct:  254 ASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAALLAGRNNQKEVKQQHLKEAVERGIAGLEKKSRRISPKEKKIVAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 481          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_RICCN (Cell division protease ftsH homolog OS=Rickettsia conorii GN=ftsH PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.269e-60
Identity = 115/224 (51.34%), Postives = 154/224 (68.75%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 672
            ASRVRD+FE+ K  A CI+FIDEIDAV           NDEREQT+NQ+L EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +       V    I+R TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +++  +S+++K+L AYHE GHALVG   P   P+ K +IIPRG A G+    P  +
Sbjct:  233 ASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETD 456          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: FTSH_RICTY (Cell division protease ftsH homolog OS=Rickettsia typhi GN=ftsH PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.270e-60
Identity = 115/224 (51.34%), Postives = 154/224 (68.75%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEE 672
            ASRVRD+FE+ K  A CI+FIDEIDAV           NDEREQT+NQ+L EMDGF  N GV+++AATNRPDVLD ALLRPGRFDRQ+ V  PD+ GR +IL+VH +       V    I+R TPGF+GA+L NL+NEAA++AAR   KE+   ++ +A ++++ G  +++  +S+++K+L AYHE GHALVG   P   P+ K +IIPRG A G+    P  +
Sbjct:  233 ASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAKDKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRLPETD 456          
The following BLAST results are available for this feature:
BLAST of FC931023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
FTSH_LACLA1.675e-6454.59Cell division protease ftsH homolog OS=Lactococcus... [more]
FTSH_MYCPU8.313e-6451.56Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCPN4.126e-6355.20Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_MYCGE9.191e-6354.75Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH_HELPJ1.327e-6155.26Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_HELPY2.264e-6155.26Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_TREPA3.862e-6152.65Cell division protease ftsH homolog OS=Treponema p... [more]
FTSH_HELFE5.043e-6155.70Cell division protease ftsH homolog OS=Helicobacte... [more]
FTSH_RICCN3.269e-6051.34Cell division protease ftsH homolog OS=Rickettsia ... [more]
FTSH_RICTY4.270e-6051.34Cell division protease ftsH homolog OS=Rickettsia ... [more]

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Properties
Property NameValue
Genbank descriptionC34100E12EF PostHarvP1 Citrus clementina cDNA clone C34100E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931023 ID=FC931023; Name=FC931023; organism=Citrus clementina; type=EST; length=687bp
GCATCCAGAGTGAGGGATTTGTTTGAGAAGGCCAAATCGAAGGCACTGTG
TATTGTGTTTATTGATGAAATTGATGCTGTGGGGAGACAGAGAGGAGCAG
GGCTTGGAGGAGGAAACGATGAAAGAGAGCAGACTATTAATCAGCTTTTG
ACTGAAATGGATGGCTTTTCTGGTAATTCTGGTGTTATTGTATTGGCTGC
TACTAATAGGCCGGATGTTCTTGATTCTGCTTTGTTGAGGCCTGGGAGAT
TTGACAGGCAGGTTACAGTGGATAGGCCTGATGTTGCTGGTAGGGTTAAA
ATTCTTCAGGTGCACTCCAGAGGAAAGGCACTTGCTAAGGATGTGGACTT
TGAAAAAATTTCTAGAAGAACACCAGGTTTTACTGGAGCTGATCTGCAGA
ACCTGATGAATGAAGCAGCCATTCTTGCAGCCAGGCGTGACCTCAAGGAG
ATAAGCAAAGATGAGATATCCGATGCTCTAGAGAGGATCATTGCTGGACC
AGAGAAGAAAAATGCAGTTGTCTCTGATGAGAAGAAGAAATTAGTAGCCT
ACCACGAGGCTGGCCATGCTTTAGTTGGGGCTCTCATGCCTGAATATGAT
CCTGTAGCCAAGATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTAC
CTTTTTCGCTCCAAGTGAAGAGAGGCTTGAGTCTGGA
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