FC931023

Overview
NameFC931023
Unique NameFC931023
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32
Identity = 72/169 (42.60%), Postives = 105/169 (62.13%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 507
            A  VRD+F+ AK K+ CI+FIDEIDAV           + E ++T+ QLL EMDGF     V ++AATNRPD+LD A+LRPGRFDR + +  PD  GR++IL++H+  K   K+VD  ++++      GADL+ +  EA + A R + + I  D+  +A+ +I    EK
Sbjct:  227 AKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE-KMNLKNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEK 394          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32
Identity = 67/169 (39.64%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 507
            A  VR+LFE A++K  CI+F DEIDA+           ++E ++T+ +L+T++DGF     + VL ATNRP+ LD AL+RPGR DR+V    PD+ GR  IL++H++  A+ KD+ +E I+R  P  TGA+L+++  EA + A R   +  ++ +  DA+++++ G +K
Sbjct:  258 ARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32
Identity = 68/172 (39.53%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 516
            A  VRDLF+ A+SK  CI+F DE+DA+           ++E ++T+ +L+ ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+ GR  I  +H++  + A+D+ FE ++R  P  TGAD++++  EA + A R   K +S+ +  +A++++I    K +A
Sbjct:  249 ARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSA 420          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.208e-32
Identity = 72/162 (44.44%), Postives = 100/162 (61.73%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER 486
            A  VR+LFE AK K+  I+FIDEIDA+           + E  +T+ QLL EMDGFS    V ++ ATNR D+LD ALLRPGRFDR + +  PD+ GRV IL +H  G  + K VD   I+ RT G  GADL+++  EA + A R D + ++ ++   ++E+
Sbjct:  232 ARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEK 393          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 507
            A  VRD+F+ AK K+ CI+FIDEIDAV           + E ++T+ QLL EMDGF     V ++AATNRPD+LD A+LRPGRFDR + +  PD  GR++IL++H+  K   K VD  ++++      GADL+ +  EA + A R + + I  D+  +A+ +I    EK
Sbjct:  227 AKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE-KMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKEK 394          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 507
            A  VRD+F+ AK K+ CI+FIDEIDAV           + E ++T+ QLL EMDGF     V ++AATNRPD+LD A+LRPGRFDR + +  PD  GR+ IL++H+  K   K VD  ++++      GADL+ +  EA + A R + + I  D+  +A+ +I    EK
Sbjct:  227 AKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTE-KMNLKGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKEK 394          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 67/172 (38.95%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 516
            A  VR+LF+ A+SK  CIVF DE+DA+           ++E ++T+ +++ ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+  R +I ++H+R     +D+ FE ++R  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K +A
Sbjct:  246 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 417          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 67/172 (38.95%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 516
            A  VR+LF+ A+SK  CIVF DE+DA+           ++E ++T+ +++ ++DGF     + VL ATNRPD LD ALLRPGR DR+V    PD+  R +I ++H+R     +D+ FE ++R  P  TGAD++++  EA + A R   K +++ +  DA+ ++I G +K +A
Sbjct:  247 ARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSA 418          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.425e-32
Identity = 80/172 (46.51%), Postives = 106/172 (61.63%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNA 516
            A  V +LFE AK KA  I+FIDEIDA+             E  +T+ QLL EMDGF     V V+AATNRPD+LD ALLRPGRFDR + V  PD  GR++IL+VH+R K   K VD   I+  T G +GADL+ +  EA + A R     +++D+   A++++I G EK+ A
Sbjct:  217 ARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTR-KMNLKGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVI-GSEKRLA 386          
BLAST of FC931023 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.391e-32
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 1
Query:    1 ASRVRDLFEKAKSKALCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKISRRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEK 507
            A  VRD+F+ AK K+ CI+FIDEIDAV           + E ++T+ QLL EMDGF     V ++AATNRPD+LD A+LRPGRFDR + +  PD  GR+ IL++H+  K   K VD  ++++      GADL+ +  EA + A R + + I  D+  +A+ +I    EK
Sbjct:  227 AKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTE-KMNLKGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKEK 394          
The following BLAST results are available for this feature:
BLAST of FC931023 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 349
Match NameE-valueIdentityDescription
PSMR_METM71.295e-3242.60Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS7_SCHPO1.691e-3239.6426S protease regulatory subunit 7 homolog OS=Schiz... [more]
PRS7_DICDI1.691e-3239.5326S protease regulatory subunit 7 OS=Dictyostelium... [more]
PSMR_METPE2.208e-3244.44Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR_METMP3.766e-3242.60Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM63.766e-3242.60Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS7_PRUPE4.919e-3238.9526S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH4.919e-3238.9526S protease regulatory subunit 7 homolog A OS=Ara... [more]
PSMR_PYRKO6.425e-3246.51Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_METM58.391e-3242.60Proteasome-activating nucleotidase OS=Methanococcu... [more]

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Properties
Property NameValue
Genbank descriptionC34100E12EF PostHarvP1 Citrus clementina cDNA clone C34100E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931023 ID=FC931023; Name=FC931023; organism=Citrus clementina; type=EST; length=687bp
GCATCCAGAGTGAGGGATTTGTTTGAGAAGGCCAAATCGAAGGCACTGTG
TATTGTGTTTATTGATGAAATTGATGCTGTGGGGAGACAGAGAGGAGCAG
GGCTTGGAGGAGGAAACGATGAAAGAGAGCAGACTATTAATCAGCTTTTG
ACTGAAATGGATGGCTTTTCTGGTAATTCTGGTGTTATTGTATTGGCTGC
TACTAATAGGCCGGATGTTCTTGATTCTGCTTTGTTGAGGCCTGGGAGAT
TTGACAGGCAGGTTACAGTGGATAGGCCTGATGTTGCTGGTAGGGTTAAA
ATTCTTCAGGTGCACTCCAGAGGAAAGGCACTTGCTAAGGATGTGGACTT
TGAAAAAATTTCTAGAAGAACACCAGGTTTTACTGGAGCTGATCTGCAGA
ACCTGATGAATGAAGCAGCCATTCTTGCAGCCAGGCGTGACCTCAAGGAG
ATAAGCAAAGATGAGATATCCGATGCTCTAGAGAGGATCATTGCTGGACC
AGAGAAGAAAAATGCAGTTGTCTCTGATGAGAAGAAGAAATTAGTAGCCT
ACCACGAGGCTGGCCATGCTTTAGTTGGGGCTCTCATGCCTGAATATGAT
CCTGTAGCCAAGATTTCCATCATTCCTCGTGGCCAAGCTGGTGGGCTTAC
CTTTTTCGCTCCAAGTGAAGAGAGGCTTGAGTCTGGA
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