FC931026

Overview
NameFC931026
Unique NameFC931026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   +++  ++D+  Y
Sbjct:    7 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVTVITKHNDDEQY 149          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 2.425e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP90_CANAL (Heat shock protein 90 homolog OS=Candida albicans GN=HSP90 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38
Identity = 81/146 (55.48%), Postives = 112/146 (76.71%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E  EF AE+S+LM +IIN++YSNK+IFLRELISNASDALDKIR+ +L+D   L      +L I+I   K++K+L IRD GIGMTK DL+ NLGTIAKSGT +F+E +    D+++IGQFGVGFYS++L AD+ + +++ ++D+  Y
Sbjct:    7 ETHEFTAEISQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPSQLES--EPELFIRIIPQKDQKVLEIRDSGIGMTKADLVNNLGTIAKSGTKSFMEALSAGADVSMIGQFGVGFYSLFLVADHVQ-VISKHNDDEQY 149          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38
Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I +   K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINLIPSKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.167e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I I  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFY+ YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK--ELHINIIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYTAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38
Identity = 86/150 (57.33%), Postives = 110/150 (73.33%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILAT--YDDNSMY 739
            +AE F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I++  DK  K LSI D GIGMTK DL+ NLGTIA+SGT  F+E +Q   D+++IGQFGVGFYS YL A   E ++ T  ++D+  Y
Sbjct:    3 DAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVA---EKVVVTTKHNDDEQY 147          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 158.303 bits (399), Expect = 4.136e-38
Identity = 85/143 (59.44%), Postives = 110/143 (76.92%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTD-KEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDD 727
            E FEFQAE+++LM +IIN++YSNK+IFLRELISNASDALDKIR+ +L+D K++  E D   L I+I    E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQFGVGFYS++L AD  + I    +D
Sbjct:    4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYQALSDPKQLETEPD---LFIRITPKPEEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKNNED 143          
The following BLAST results are available for this feature:
BLAST of FC931026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90A_PANTR2.425e-3856.85Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA2.425e-3856.85Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN2.425e-3856.85Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE2.425e-3856.85Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN2.425e-3856.85Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HSP90_CANAL3.167e-3855.48Heat shock protein 90 homolog OS=Candida albicans ... [more]
HS90A_MOUSE3.167e-3856.85Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_CRIGR3.167e-3856.85Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSP81_ARATH4.136e-3857.33Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSC82_YEAST4.136e-3859.44ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionC34100F03EF PostHarvP1 Citrus clementina cDNA clone C34100F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931026 ID=FC931026; Name=FC931026; organism=Citrus clementina; type=EST; length=754bp
GAATTGGCAATAATTTGATCATTTTCAACTGATCGAAGCTACTAGAACTA
TACCAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTGTCGCTCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGGTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAAGTATTTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGG
CTGA
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