FC931026

Overview
NameFC931026
Unique NameFC931026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90B_HORSE (Heat shock protein HSP 90-beta OS=Equus caballus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G   +L+I I  + +++ L++ D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+    ++  ++D+  Y
Sbjct:   13 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK--ELKIDIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVVVITKHNDDEQY 155          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 5.402e-38
Identity = 83/160 (51.88%), Postives = 112/160 (70.00%), Query Frame = 2
Query:  260 EAESISKRSLRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            EA     + +    E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G +  L+I +  +K  + L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVG YS YL A+   +++  ++D+  Y
Sbjct:    3 EAVQTQDQPMEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKD--LKINLIPNKHDRTLTIVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGSYSAYLVAE-KVTVITKHNDDEQY 159          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_DROPS (Heat shock protein 83 OS=Drosophila pseudoobscura pseudoobscura GN=Hsp83 PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38
Identity = 87/149 (58.39%), Postives = 108/149 (72.48%), Query Frame = 2
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD   ++ +  +D+  Y
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD-RVTVTSKNNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_DROPE (Heat shock protein 83 (Fragment) OS=Drosophila persimilis GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38
Identity = 87/149 (58.39%), Postives = 108/149 (72.48%), Query Frame = 2
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD   ++ +  +D+  Y
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD-RVTVTSKNNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_DROMI (Heat shock protein 83 (Fragment) OS=Drosophila miranda GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38
Identity = 87/149 (58.39%), Postives = 108/149 (72.48%), Query Frame = 2
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G     E+ IKL  +K    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD   ++ +  +D+  Y
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK----ELYIKLIPNKTAGTLTIIDTGIGMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD-RVTVTSKNNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90B_BOVIN (Heat shock protein HSP 90-beta OS=Bos taurus GN=HSP90AB1 PE=2 SV=3)

HSP 1 Score: 157.532 bits (397), Expect = 7.056e-38
Identity = 82/146 (56.16%), Postives = 109/146 (74.66%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G   +L+I I  + +++ L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+    ++  ++D+  Y
Sbjct:   13 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGK--ELKIDIIPNPQERTLTLVDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVVVITKHNDDEQY 155          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 9.215e-38
Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            N E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ +LT+   L  G   +L I+I  +K  K L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS +L AD    + + ++D+  Y
Sbjct:    6 NGETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYQALTEPAELETGK--ELYIKITPNKADKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAFLVAD-KVVVASKHNDDDCY 150          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.204e-37
Identity = 85/149 (57.05%), Postives = 108/149 (72.48%), Query Frame = 2
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILAT--YDDNSMY 739
            AE F FQAE+++L+ +IIN+ YSNK+IFLRELISNASDALDKIRF SLTDK  L      +L I++  DK  K LSI D G+GM K DL+ NLGTIA+SGT  F+E +Q   D+++IGQFGVGFYS YL A   E ++ T  ++D+  Y
Sbjct:    9 AETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDA--QPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVA---EKVIVTTKHNDDEQY 152          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37
Identity = 82/131 (62.60%), Postives = 101/131 (77.10%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGAD 694
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKIR+ SLTD   L  G   +L I+I  +KE   L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD
Sbjct:    8 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLESGK--ELFIKIIPNKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAD 136          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS90B_CHICK (Heat shock cognate protein HSP 90-beta OS=Gallus gallus GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.681e-37
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 2
Query:  293 NNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            +  E F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ SLTD   L  G +  L+I I  +     L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL A+    ++  ++D+  Y
Sbjct:   10 DEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDTGKD--LKIDIVPNPRDPTLTLLDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAE-KVVVITKHNDDEQY 155          
The following BLAST results are available for this feature:
BLAST of FC931026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HS90B_HORSE5.402e-3856.85Heat shock protein HSP 90-beta OS=Equus caballus G... [more]
HS90A_CHICK5.402e-3851.88Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HSP83_DROPS7.056e-3858.39Heat shock protein 83 OS=Drosophila pseudoobscura ... [more]
HSP83_DROPE7.056e-3858.39Heat shock protein 83 (Fragment) OS=Drosophila per... [more]
HSP83_DROMI7.056e-3858.39Heat shock protein 83 (Fragment) OS=Drosophila mir... [more]
HS90B_BOVIN7.056e-3856.16Heat shock protein HSP 90-beta OS=Bos taurus GN=HS... [more]
HSP90_BRUPA9.215e-3856.08Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP83_IPONI1.204e-3757.05Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP83_ANOGA2.053e-3762.60Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
HS90B_CHICK2.681e-3755.03Heat shock cognate protein HSP 90-beta OS=Gallus g... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100F03EF PostHarvP1 Citrus clementina cDNA clone C34100F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931026 ID=FC931026; Name=FC931026; organism=Citrus clementina; type=EST; length=754bp
GAATTGGCAATAATTTGATCATTTTCAACTGATCGAAGCTACTAGAACTA
TACCAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTGTCGCTCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGGTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAAGTATTTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGG
CTGA
back to top