FC931026

Overview
NameFC931026
Unique NameFC931026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: ENPL_RABIT (Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.973e-37
Identity = 81/130 (62.31%), Postives = 101/130 (77.69%), Query Frame = 2
Query:  320 AEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLGAD 694
            AEV+R+M +IINSLY NK+IFLRELISNASDALDKIR +SLTD++ L    N +L ++IK DKEK +L + D G+GMT+E+L+KNLGTIAKSGTS F+ KM  + +       LIGQFGVGFYS +L AD
Sbjct:    1 AEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDEQAL--SGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFLVAD 128          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            +AE F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL AD    +   ++D+  Y
Sbjct:    3 DAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAD-KVVVTTKHNDDEQY 147          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.019e-36
Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 2
Query:  296 NAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            +AE F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL AD    +   ++D+  Y
Sbjct:    3 DAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAD-KVVVTTKHNDDEQY 147          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HS902_HUMAN (Putative heat shock protein HSP 90-alpha A2 OS=Homo sapiens GN=HSP90AA2 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36
Identity = 81/146 (55.48%), Postives = 107/146 (73.29%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++LM +IIN+ YSNK+IFLRELISN+SDALDKI + SLTD   L  G   +L I +  +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGV FYS YL A+   +++  ++D+  Y
Sbjct:   18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIWYESLTDPSKLDSGK--ELHINLIPNKQDQTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVSFYSAYLVAE-KVTVITKHNDDEQY 160          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36
Identity = 82/151 (54.30%), Postives = 105/151 (69.54%), Query Frame = 2
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            + +  E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL A+    +   ++D+  Y
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAE-RVVVTTKHNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.738e-36
Identity = 82/151 (54.30%), Postives = 105/151 (69.54%), Query Frame = 2
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            + +  E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL A+    +   ++D+  Y
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAE-RVVVTTKHNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 2
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            + +  E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D G+GMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL A+    +   ++D+  Y
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAE-RVVVTTKHNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 2
Query:  287 LRNNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            + +  E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    LSI D G+GMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL A+    +   ++D+  Y
Sbjct:    1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA--QPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAE-RVVVTTKHNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.056e-36
Identity = 83/151 (54.97%), Postives = 107/151 (70.86%), Query Frame = 2
Query:  293 NNAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILAT--YDDNSMY 739
            ++ E F FQAE+++L+ +IIN+ YSNK+IFLRELISN+SDALDKIRF SLTDK  L      +L I I  DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YL A   E ++ T  ++D+  Y
Sbjct:    2 SDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD--GQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVA---EKVVVTTKHNDDEQY 147          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.604e-36
Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKL--DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSG-DLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            E F FQAE+++L+ +IIN+ YSNK+IFLRELISNASDALDKIRF SLTDK  +    N + E+ I+L  DK  K LSI D G+GMTK DL+ NLGTIA+SGT  F+E +     D+++IGQFGVGFYS YL AD    +   ++D+  Y
Sbjct:   15 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSNV----NAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGATDVSMIGQFGVGFYSAYLVAD-RVMVTTKHNDDEQY 158          
The following BLAST results are available for this feature:
BLAST of FC931026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
ENPL_RABIT5.973e-3762.31Endoplasmin (Fragment) OS=Oryctolagus cuniculus GN... [more]
HSP83_ARATH1.019e-3656.08Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH1.019e-3656.08Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HS902_HUMAN1.331e-3655.48Putative heat shock protein HSP 90-alpha A2 OS=Hom... [more]
HSP81_ORYSJ1.738e-3654.30Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.738e-3654.30Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ2.270e-3653.64Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ2.270e-3653.64Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP80_SOLLC5.056e-3654.97Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP82_MAIZE6.604e-3656.38Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionC34100F03EF PostHarvP1 Citrus clementina cDNA clone C34100F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931026 ID=FC931026; Name=FC931026; organism=Citrus clementina; type=EST; length=754bp
GAATTGGCAATAATTTGATCATTTTCAACTGATCGAAGCTACTAGAACTA
TACCAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTGTCGCTCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGGTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAAGTATTTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGG
CTGA
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