FC931026

Overview
NameFC931026
Unique NameFC931026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_MYXXD (Chaperone protein htpG OS=Myxococcus xanthus (strain DK 1622) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.775e-34
Identity = 75/139 (53.96%), Postives = 103/139 (74.10%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSG---DLNLIGQFGVGFYSVYLGADYXESI 709
            E   FQAE+++L+ ++INSLYS+K+IFLREL+SNASDALDK+RF ++T+ E+L   D   LE+++  D+ K  L+I D GIGM+ ++L+KNLGTIA SG+  F+E +   G   D+ LIGQFGVGFYS YL AD  E +
Sbjct:   10 ETHAFQAEINQLLSLVINSLYSHKEIFLRELVSNASDALDKLRFRAITEPELL--ADEPALELRLIPDEAKGTLTIEDTGIGMSHDELVKNLGTIAHSGSREFIEALAQKGQQKDMQLIGQFGVGFYSAYLVADRVEVV 146          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_DESHY (Chaperone protein htpG OS=Desulfitobacterium hafniense (strain Y51) GN=htpG PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.624e-34
Identity = 75/147 (51.02%), Postives = 108/147 (73.47%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSG---DLNLIGQFGVGFYSVYLGADYXESILATYDDNS 733
            E  EFQ E+ +L+DI+INSLY++++IFLRELISNA+DA +K+R++ L+ + V  +     LEI+I  D+  K L+I D GIGMTKEDLI+N+GTIA SG+ AFV+++  +G   D+NLIGQFGVGFYS ++ AD       +Y+ ++
Sbjct:    5 ETKEFQTEIRQLLDIVINSLYTDREIFLRELISNAADASEKVRYMQLSGQNV--KDQELPLEIRITPDENAKTLTIADAGIGMTKEDLIENIGTIAHSGSKAFVQRLAEAGDKKDVNLIGQFGVGFYSAFMVADKVSLTSRSYEPDA 149          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HSP83_DROPB (Heat shock protein 83 (Fragment) OS=Drosophila pseudoobscura bogotana GN=Hsp83 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.073e-34
Identity = 80/147 (54.42%), Postives = 100/147 (68.03%), Query Frame = 2
Query:  299 AEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            AE F FQAE+++LM +IIN+ YSNK+IFLRELISNASDALDKIR+ S TD   L              +K    L+I D GI MTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YL AD   ++ +  +D+  Y
Sbjct:    5 AETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYXSXTDPXKLXXXXXXXXXXIP--NKTAGTLTIIDTGIXMTKSDLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLIAD-RVTVTSKNNDDEQY 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_RHORT (Chaperone protein htpG OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=htpG PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.054e-33
Identity = 77/141 (54.61%), Postives = 102/141 (72.34%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQ-----TSGDLNLIGQFGVGFYSVYLGADYXESI 709
            E   FQAEVS+L+DI+++SLYS++ IFLRELISNASDA DK+R+  LT   +L EGD     I++ +D E   L+I D GIGM + +LI+NLGTIA+SGT AF E ++      SGD++LIGQFGVGFYS ++ AD  E +
Sbjct:    4 ETLSFQAEVSKLLDIVVHSLYSDRKIFLRELISNASDACDKLRYEGLTQPALL-EGDGA-FRIRLSIDAEAGTLTIADNGIGMNRHELIENLGTIARSGTQAFAEALKAKSQAASGDVSLIGQFGVGFYSAFMVADKVEVV 142          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_NEOSM (Chaperone protein htpG OS=Neorickettsia sennetsu (strain Miyayama) GN=htpG PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33
Identity = 73/132 (55.30%), Postives = 104/132 (78.79%), Query Frame = 2
Query:  308 FEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLGADYXE 703
            + F A+ S++++++I+SLY +KD+FLRELISNASDAL+K+R  S  D+E+L   DN +LEI I L+KEKKIL I D GIGM +++L++NLGT+A+SGT  F+E ++    ++LIGQFGVGFYSV++ AD  E
Sbjct:   10 YSFDADASKVLNLVIHSLYRHKDVFLRELISNASDALNKLREASYFDQELL--EDNPELEILISLNKEKKILEISDNGIGMDEKELVENLGTVARSGTEKFLESLKDK-KVDLIGQFGVGFYSVFMVADKVE 138          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 75/129 (58.14%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++ AD
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVAD 137          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 75/129 (58.14%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++ AD
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVAD 137          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 75/129 (58.14%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++ AD
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVAD 137          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_YERPE (Chaperone protein htpG OS=Yersinia pestis GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 75/129 (58.14%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++ AD
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVAD 135          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_YERPA (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 75/129 (58.14%), Postives = 102/129 (79.07%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L++ E L EGD  +L +++  DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++ AD
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVAD 137          
The following BLAST results are available for this feature:
BLAST of FC931026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_MYXXD2.775e-3453.96Chaperone protein htpG OS=Myxococcus xanthus (stra... [more]
HTPG_DESHY3.624e-3451.02Chaperone protein htpG OS=Desulfitobacterium hafni... [more]
HSP83_DROPB8.073e-3454.42Heat shock protein 83 (Fragment) OS=Drosophila pse... [more]
HTPG_RHORT1.054e-3354.61Chaperone protein htpG OS=Rhodospirillum rubrum (s... [more]
HTPG_NEOSM1.377e-3355.30Chaperone protein htpG OS=Neorickettsia sennetsu (... [more]
HTPG_YERPS1.798e-3358.14Chaperone protein htpG OS=Yersinia pseudotuberculo... [more]
HTPG_YERPP1.798e-3358.14Chaperone protein htpG OS=Yersinia pestis (strain ... [more]
HTPG_YERPN1.798e-3358.14Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]
HTPG_YERPE1.798e-3358.14Chaperone protein htpG OS=Yersinia pestis GN=htpG ... [more]
HTPG_YERPA1.798e-3358.14Chaperone protein htpG OS=Yersinia pestis bv. Anti... [more]

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Properties
Property NameValue
Genbank descriptionC34100F03EF PostHarvP1 Citrus clementina cDNA clone C34100F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931026 ID=FC931026; Name=FC931026; organism=Citrus clementina; type=EST; length=754bp
GAATTGGCAATAATTTGATCATTTTCAACTGATCGAAGCTACTAGAACTA
TACCAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTGTCGCTCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGGTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAAGTATTTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGG
CTGA
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