FC931026

Overview
NameFC931026
Unique NameFC931026
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:43..796. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_HELPJ (Chaperone protein htpG OS=Helicobacter pylori J99 GN=htpG PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33
Identity = 73/132 (55.30%), Postives = 101/132 (76.52%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGA 691
            +++ FQ E+++L+D++I+SLYSNK+IFLRELISNASDALDK+ +L LTD+++  +G NT   I +  D +KK L+I+D GIGM K DLI++LGTIAKSGT +F+  +      D  LIGQFGVGFYS ++ A
Sbjct:    4 QEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKL--KGLNTTPSIHLSFDSQKKTLTIKDNGIGMDKSDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVA 133          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_YERE8 (Chaperone protein htpG OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=htpG PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33
Identity = 75/129 (58.14%), Postives = 101/129 (78.29%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L+  E L EGD  +L +++  DKEK+ L++ D GIGM++E++I NLGTIAKSGT AF+E +    + D  LIGQFGVGFYS ++ AD
Sbjct:   11 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSHPE-LFEGDG-ELRVRLSFDKEKRTLTLSDNGIGMSREEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVAD 137          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_ARCB4 (Chaperone protein htpG OS=Arcobacter butzleri (strain RM4018) GN=htpG PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.006e-33
Identity = 75/147 (51.02%), Postives = 101/147 (68.71%), Query Frame = 2
Query:  305 KFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            K +FQ EV +L+ ++ +SLYSNK+IF+REL+SNASDA+DK+ +L LTD+ +  +    K EI I  D++ K LSI D GIGM + DLI ++GTIAKSGT +FVE +      D NLIGQFGVGFYSV++ AD  + I     +   Y
Sbjct:    3 KHQFQTEVGQLLHLMTHSLYSNKEIFIRELVSNASDAIDKLNYLRLTDENLKDKYAQWKGEINISFDEKDKSLSIIDNGIGMNEADLIASIGTIAKSGTKSFVEALTGDAKKDSNLIGQFGVGFYSVFMVADKVDVISKKAGEEQAY 149          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33
Identity = 75/148 (50.68%), Postives = 107/148 (72.30%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMY 739
            EK +F AEV ++++++I+SLYSNK+IF+RELISNASDA DK+R+LS ++ E++    N K  I +K+DK+ + + IRD GIGM KEDLI+NLGTIA+SGT+ F++ +   +  D  LIGQFGVGFYS ++ AD          +N +Y
Sbjct:    4 EKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELISGDSNFK--IIVKVDKDNEQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGENKVY 149          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_HELPY (Chaperone protein htpG OS=Helicobacter pylori GN=htpG PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.233e-33
Identity = 72/132 (54.55%), Postives = 100/132 (75.76%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGA 691
            +++ FQ E+++L+D++I+SLYSNK+IFLREL+SNASDALDK+ +L LTD+++  +G NT   I +  D +KK L+I+D GIGM K DLI++LGTIAKSGT  F+  +      D  LIGQFGVGFYS ++ A
Sbjct:    4 QEYTFQTEINQLLDLMIHSLYSNKEIFLRELVSNASDALDKLNYLMLTDEKL--KGLNTTPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKNFLSALSGDKKKDSALIGQFGVGFYSAFMVA 133          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_IDILO (Chaperone protein htpG OS=Idiomarina loihiensis GN=htpG PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33
Identity = 69/133 (51.88%), Postives = 101/133 (75.94%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            EK  FQ EV +L+ ++I+SLYSNK+IFLREL+SNASDA DK+RF +L+D  +   GD++ L +++ +DK+ + ++I D G+GMT++D++ NLGTIAKSGT+ F  ++    + D  LIGQFGVGFYS ++ AD
Sbjct:    8 EKHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNASDAADKLRFKALSDNSLY--GDDSDLHVRVSVDKDSRTITISDNGVGMTRDDVMNNLGTIAKSGTAEFFGQLSGDEAKDSKLIGQFGVGFYSAFIVAD 138          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_ERWCT (Chaperone protein htpG OS=Erwinia carotovora subsp. atroseptica GN=htpG PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.834e-33
Identity = 74/130 (56.92%), Postives = 101/130 (77.69%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEV-LGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTS--GDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L+  E+  G+GD   L +++  DKEK+ L+I D GIGM+++++I NLGTIAKSGT +F+E M +    D  LIGQFGVGFYS ++ AD
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSTPELYAGDGD---LRVRVSTDKEKRTLTISDNGIGMSRDEVIDNLGTIAKSGTKSFLESMGSDQVKDSQLIGQFGVGFYSAFIVAD 135          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_HELPH (Chaperone protein htpG OS=Helicobacter pylori (strain HPAG1) GN=htpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33
Identity = 72/132 (54.55%), Postives = 100/132 (75.76%), Query Frame = 2
Query:  302 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGA 691
            +++ FQ E+++L+D++I+SLYSNK+IFLRELISNASDALDK+ +L LTD+++  +G N    I +  D +KK L+I+D GIGM K DLI++LGTIAKSGT +F+  +      D  LIGQFGVGFYS ++ A
Sbjct:    4 QEYTFQTEINQLLDLMIHSLYSNKEIFLRELISNASDALDKLNYLMLTDEKL--KGLNITPSIHLSFDSQKKTLTIKDNGIGMDKNDLIEHLGTIAKSGTKSFLSALSGDKKKDSALIGQFGVGFYSAFMVA 133          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_FUSNN (Chaperone protein htpG OS=Fusobacterium nucleatum subsp. nucleatum GN=htpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33
Identity = 73/148 (49.32%), Postives = 106/148 (71.62%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTS--GDLNLIGQFGVGFYSVYLGADYXESILATYDDNSMYGNQG 751
            F+AE   L++++I+S+Y+NK+IFLRELISNA+DA+DK++F SLTD ++L   DN K  I I +DK+ + L+I D GIGMT E++  N+GTIAKSG+  F E+++ +  GD+++IGQFGVGFYS ++ AD       T +  S Y   G
Sbjct:    8 FKAETKELLNLMIHSIYTNKEIFLRELISNANDAIDKLKFQSLTDTDIL--KDNDKFRIDISVDKDNRTLTISDNGIGMTYEEVDDNIGTIAKSGSKLFKEQLEEAKKGDIDIIGQFGVGFYSGFIVAD-----KITLETKSPYSENG 148          
BLAST of FC931026 vs. ExPASy Swiss-Prot
Match: HTPG_ENTS8 (Chaperone protein htpG OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=htpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33
Identity = 73/130 (56.15%), Postives = 101/130 (77.69%), Query Frame = 2
Query:  314 FQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVL-GEGDNTKLEIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLGAD 694
            FQ+EV +L+ ++I+SLYSNK+IFLRELISNASDA DK+RF +L+  ++  G+GD   L +++  DK+K+ L+I D GIGMT++++I +LGTIAKSGT AF+E M    + D  LIGQFGVGFYS ++ AD
Sbjct:    9 FQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSSPDLYEGDGD---LRVRVSFDKDKRTLTIADNGIGMTRDEVIDHLGTIAKSGTKAFLESMGSDQAKDSQLIGQFGVGFYSAFIVAD 135          
The following BLAST results are available for this feature:
BLAST of FC931026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
HTPG_HELPJ1.798e-3355.30Chaperone protein htpG OS=Helicobacter pylori J99 ... [more]
HTPG_YERE84.006e-3358.14Chaperone protein htpG OS=Yersinia enterocolitica ... [more]
HTPG_ARCB44.006e-3351.02Chaperone protein htpG OS=Arcobacter butzleri (str... [more]
HTPG_RICTY5.233e-3350.68Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_HELPY5.233e-3354.55Chaperone protein htpG OS=Helicobacter pylori GN=h... [more]
HTPG_IDILO6.834e-3351.88Chaperone protein htpG OS=Idiomarina loihiensis GN... [more]
HTPG_ERWCT6.834e-3356.92Chaperone protein htpG OS=Erwinia carotovora subsp... [more]
HTPG_HELPH8.925e-3354.55Chaperone protein htpG OS=Helicobacter pylori (str... [more]
HTPG_FUSNN8.925e-3349.32Chaperone protein htpG OS=Fusobacterium nucleatum ... [more]
HTPG_ENTS88.925e-3356.15Chaperone protein htpG OS=Enterobacter sakazakii (... [more]

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Properties
Property NameValue
Genbank descriptionC34100F03EF PostHarvP1 Citrus clementina cDNA clone C34100F03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931026 ID=FC931026; Name=FC931026; organism=Citrus clementina; type=EST; length=754bp
GAATTGGCAATAATTTGATCATTTTCAACTGATCGAAGCTACTAGAACTA
TACCAATTTCAAAGTTAACAATGAGGAAGTGGACAATCCCTTCCATATTG
CTTCTCCTTTTCCTTGTCGCTCTGATTCCAGATCAAGGCCGAAATATACA
GGCAAAAGCAGAGGATGAATCTGATAAACTAGTGGATCCTCCTAAGGTCG
AGGAGAAACTCGGAGCCGTACCAAATGGTTTGTCGACAGATTCTGACGTG
GCAAAGAGGGAAGCGGAGTCGATCTCGAAGAGGTCACTTCGTAATAATGC
GGAGAAATTTGAATTCCAAGCTGAGGTGTCTCGGCTCATGGATATTATCA
TCAATTCTCTTTACAGCAACAAAGATATTTTCCTCAGAGAGTTGATTTCC
AATGCTTCTGATGCACTAGACAAGATTAGATTCCTCTCTTTGACTGACAA
AGAGGTCTTGGGAGAAGGAGACAACACTAAGCTGGAGATCCAGATTAAGC
TAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTATG
ACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAAC
ATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATTG
GGCAATTTGGTGTTGGGTTTTACTCTGTATATCTTGGTGCTGACTATGNT
GAAAGTATTTTAGCAACATATGATGACAACAGTATGTATGGGAATCAAGG
CTGA
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