FC931030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.059e-72 Identity = 132/230 (57.39%), Postives = 170/230 (73.91%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G FEAG+S +GQTREHA+LA T+G+ Q+I NKMDAT P YS+ RY+EI + + +LK +GY+ KIPF+PIS + G+N+IERS N+ WY GPTL+EALD + P +P +KPLR+P+QDVY I GIG VPVGRVETGVLK G + F P+GL EVK++E HH + +A PGDN+GFNVK V KD+KRG VA S D P A FT++ Sbjct: 103 MITGASQADAAILVVSARKGEFEAGMSAEGQTREHAILARTMGINQLIVAINKMDATEPPYSEKRYNEIKEILGKFLKGLGYDVSKIPFIPISAWTGENLIERSPNMPWYNGPTLVEALDTLEVPPKPINKPLRIPIQDVYNISGIGVVPVGRVETGVLKVGDKLVFMPAGLVAEVKTIETHHTKIEKAEPGDNIGFNVKGVEKKDIKRGDVA-GSLDVPPTVADEFTAR 331
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.378e-70 Identity = 125/230 (54.35%), Postives = 169/230 (73.48%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G FEAG+S +GQTREHA+LA T+G+ Q+I NKMDAT P +S+ RY++I + +LK +GY+ K+PF+P+S + GDN+IERS N+ WY GPTL+EALD + P +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G V F P EV+S+E HH + +A PGDN+GFNV+ VS +D++RG VA + D+P A FT++ Sbjct: 102 MITGASQADAALLVVSARKGEFEAGMSPEGQTREHAILAKTMGINQLIVAVNKMDATEPPWSQKRYEQIKTILGKFLKSLGYDISKVPFIPVSAWTGDNLIERSPNMPWYNGPTLVEALDSLEPPPKPIDKPLRIPIQDVYAISGVGTVPVGRVETGVLRVGDKVVFMPPAKVGEVRSIETHHVRIEKAEPGDNIGFNVRGVSKRDIRRGDVAGH-LDNPPTVAEEFTAR 330
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 4.134e-69 Identity = 127/232 (54.74%), Postives = 172/232 (74.14%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEP--KRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G+ Q+I NKMDAT P +S+ RY +IV+ + ++K +G+ D+IPFVP+S + GDN+I+RS N+ WYKGPTL+EALD + P ++ PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P G+ EV+S+EMHHE + +A+PGDN+GFNV+ VS D+KRG VA + ++ P A FT++ Sbjct: 103 MITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPFVPVSAWTGDNIIKRSENMPWYKGPTLVEALDNLKPPSVEKWAKLPLRIPIQDVYSITGVGTVPVGRVETGVLKVGDKVVFMPPGVGGEVRSIEMHHEKIEQAMPGDNIGFNVRGVSKNDIKRGDVAGHPENPPTV-ADQFTAR 333
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.052e-69 Identity = 125/230 (54.35%), Postives = 167/230 (72.61%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G++Q+I NKMDA Y + RY+ +V + ++K +GY DKIPF+P+S ++GDN+IERS N+ WY GPTL+EALDQ+ P +P DKPLR+P+Q+VY I G GTVPVGRVETGVL+ G V F P G+ EV+S+EMH++ L +A PGDN+GF V+ VS D+KRG VA + D P A F ++ Sbjct: 101 MITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGEVRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGH-LDKPPTVAEEFEAR 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 5.054e-67 Identity = 140/251 (55.78%), Postives = 172/251 (68.53%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK----YSKARYDEIVKEVSSYLKKVGYNP------------------DK--------IPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG-LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITGTSQAD A+L+ID FEAGI++ G T+EHALLA+TLGVKQ+ NKMD K +++ RY+E+V + L K+G+ DK FVPISG+ GDNM+E+STN+ WY GPTL E LD + PKRPT+ PLRLPLQDVYKIGGIGTVPVGRVETG+LK GM VTF P+G EVKSVEMHH S+ +A+PGDNVGFNVK ++VKD+KRG V ++K+DP Sbjct: 102 MITGTSQADVALLVIDGNN--FEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIGFKKKDKGDKKKGDKKEKKDKKDKGEKKYVCSATFVPISGWTGDNMLEKSTNMPWYTGPTLFEVLDAMKPPKRPTEDPLRLPLQDVYKIGGIGTVPVGRVETGILKAGMQVTFEPAGKAAVEVKSVEMHHTSVPQAIPGDNVGFNVK-LTVKDIKRGDVCGDTKNDP 349
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 251.521 bits (641), Expect = 3.276e-66 Identity = 120/230 (52.17%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + RY EIV +VS +++ G+N +K+ FVP+ GDN+ RS N+ WY GPTL E LDQ+ P +P DKPLR+P+QDVY I G+GTVPVGRVE+GVLK G + F P+G EV+S+E HH + +A PGDN+GFNV+ V KD+KRG V + + P A FT++ Sbjct: 101 MITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPAGDNITHRSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDKIVFMPAGKVGEVRSIETHHTKMDKAEPGDNIGFNVRGVEKKDIKRGDVVGHPNNPPTV-ADEFTAR 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 3.622e-65 Identity = 127/231 (54.98%), Postives = 167/231 (72.29%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++D + GI QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K +S L KV GYNPD+I F+P + +GDN+++RS N+ WYKGPTL+EALD+ P++PT+ PLR+P+QDVY I G+GTVPVGRVETG+L+PG V F P+G++ EVKS+EMHHE + +A PGDN+GFNV+ VS KD+KRG V + D+P A FT+Q Sbjct: 102 MITGASQADAAVLVVDVNDA--KTGIQP--QTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKKMLSEQLLKVLGYNPDQIDFIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSITGVGTVPVGRVETGILRPGDKVVFEPAGVSGEVKSIEMHHEQIPQAEPGDNIGFNVRGVSKKDIKRGDVCGH-PDNPPTVAEEFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 6.178e-65 Identity = 120/230 (52.17%), Postives = 160/230 (69.57%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + R+ EIV +V ++K G++ +K+ FVP+ G+N+ +RS N+ WY GPTL E LDQ+ P +P DKPLR+P+Q+VY I G+G VPVGRVETGVLK G V F P G EV+S+E HH + +A PGDN+GFNV+ V KD+KRG VA S + P A FT+Q Sbjct: 101 MITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILAKTMGINQVIVAVNKMDLTDPPYDEKRFKEIVDQVGKFMKSFGFDMNKVKFVPVVAPTGENITQRSENMKWYTGPTLEEYLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRVETGVLKVGDKVVFMPVGKVGEVRSIETHHTKIEKAEPGDNIGFNVRGVEKKDIKRGDVA-GSLNVPPTVADEFTAQ 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 1.987e-63 Identity = 125/230 (54.35%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITGTSQAD A+L+I + G G+ + QTREHA LA TLGV QM+ NKMDAT+P YS+ RY+E+ + L+ +G+ I FVPISG++GDN+ + S N+ WYKGPTLL+ALD P++P +KPLR+P++DVY I GIGTVPVGRVETGVLKPG V F P+ +VKS+EMHHE L +A PGDN+GFNV+ ++ D+KRG V + D P FT+Q Sbjct: 102 MITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQMVVAINKMDATSPPYSEKRYNEVKADAEKLLRSIGFKD--ISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGH-LDTPPTVVKAFTAQ 323
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.987e-63 Identity = 113/230 (49.13%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L + + G FE+G+S +GQTREH +LA T+G+ Q+I KMD P Y + RY+EI + + ++K G++ K+ F+PI G+N+ +RS N+ WY GPTL EALD + P +P DKPLRLP+Q+VY I G+GTVPVGRVE+GV+K G + F P+G + EV+S+E HH L +A PGDN+GFNV+ + KD+KRG V ++ + P A FT++ Sbjct: 101 MITGASQADAAILAVSARKGEFESGMSLEGQTREHIILAKTMGLNQVIVAITKMDVAEPPYDQKRYNEIKETIEKFMKSFGFDMSKVKFIPIVSITGENVTKRSENMKWYNGPTLEEALDMLEIPPKPVDKPLRLPIQEVYSISGVGTVPVGRVESGVMKVGDKIVFMPAGKSAEVRSIETHHTKLEKAEPGDNIGFNVRGIDKKDVKRGDVVGHTTNPPTV-AEEFTAR 329 The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bpback to top |