FC931030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.782e-63 Identity = 115/230 (50.00%), Postives = 158/230 (68.70%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G +EAG+S +GQTREH +L+ T+G+ Q+I NKMD Y + R+ EIV VS ++K G++ +K+ FVP+ +GDN+ +ST + WY GPTL E LDQ+ P +P DKPLR+P+Q+VY I G+G VPVGR+E+GVLK G + F P G EV+S+E HH + +A PGDN+GFNV+ V KD+KRG VA S +P A FT+Q Sbjct: 101 MITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILSKTMGINQVIVAINKMDLADTPYDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVAPDGDNVTHKSTKMPWYNGPTLEELLDQLEIPPKPVDKPLRIPIQEVYSISGVGVVPVGRIESGVLKVGDKIVFMPVGKIGEVRSIETHHTKIDKAEPGDNIGFNVRGVEKKDVKRGDVA-GSVQNPPTVADEFTAQ 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.782e-63 Identity = 120/230 (52.17%), Postives = 162/230 (70.43%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G E QT+EH L+ TLG+ Q+I NKMDA KY + RY+E+ +++S LK VGY PD I F+P+S F GDN+ ++S N WYKGPT+L+AL+ ++EP++PT+ P+RLP+QDVY I GIGTVPVGRVETG++K GM V+F P+ E+KS+EMHHE + +ALPGDNVGFNV+ + D++RG V S D P A F +Q Sbjct: 102 MITGASQADAALLVVAAPDGVME-------QTKEHVFLSRTLGINQLIIGINKMDAA--KYDEKRYNEVKEQLSQLLKMVGYKPDDISFIPMSAFVGDNIAKKSENTPWYKGPTVLDALNALSEPEKPTNLPMRLPIQDVYSISGIGTVPVGRVETGIMKKGMKVSFMPANKEGEIKSIEMHHEEIPQALPGDNVGFNVRGIGKGDIRRGDVCGPS-DVPPTVAEEFIAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.782e-63 Identity = 124/228 (54.39%), Postives = 157/228 (68.86%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTT-------EVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPA 684 MITG SQAD A+L++ + G QT+EHA LA TLG+ Q+I NKMD Y + RY+E+ +EV+ LK +GYN D+IPF+PIS FEGDN++E+S N WY GPTLLEALD + P++PTDKPLR+P+QDVY I G+GTVPVGRVETGVL+ G V F P+ T EV+S+EMHHE + A PGDN+GFNVK V D+ RG VA + D+PA Sbjct: 92 MITGASQADAAILVVAADDGVMP-------QTKEHAFLAKTLGIDQLIVAINKMDLVD--YDENRYEEVKQEVAELLKTIGYNVDEIPFIPISAFEGDNVVEKSDNTPWYDGPTLLEALDNLEPPEKPTDKPLRIPIQDVYSITGVGTVPVGRVETGVLEVGDTVRFEPAYTATGGRKGEGEVRSIEMHHEEIERAEPGDNIGFNVKGVGKNDISRGDVACH-PDEPA 309
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.782e-63 Identity = 119/230 (51.74%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AV+++ + G E QT+EH L+ TLG+KQ+I NKMDA Y +AR++++ +V + LK VG NPD + F+PIS FEGDN+ + S + WYKG TL LD++ P +PT+KPLR+P+QD Y I GIGTVPVGRVETG+LK GM VTF P+ + EVKS+EMHHE + +A+PGDN+GFNV+ + D++RG V S D+P A FT+Q Sbjct: 102 MITGASQADAAVIVVAAPDGVME-------QTKEHVFLSKTLGIKQLIVAVNKMDAAN--YDEARFNQVKSDVGALLKMVGTNPDTVKFIPISAFEGDNITKNSDKMPWYKGKTLFGLLDELEVPDKPTEKPLRVPIQDAYSISGIGTVPVGRVETGILKKGMNVTFMPANKSGEVKSIEMHHEEIPQAVPGDNIGFNVRGIGKDDVRRGDVCGAS-DNPPAVAEEFTAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.682e-62 Identity = 115/230 (50.00%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ + G QT+EH LA TLGV Q+I NKMDAT P Y + RY+E+ +EV L+ VGY D++PF+P+S + GDN+++ S WY GPT+L+AL+ + EP++P + PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P+ ++ EVKS+E+HH+ + EA PGDN+G+NV+ + D++RG V + D+P A FT+Q Sbjct: 102 MITGASQADAAVLVVAAPDGVM-------AQTKEHVFLARTLGVNQLIVAINKMDATEPPYDEKRYNEVKEEVGKLLRMVGYKIDEVPFIPVSAYNGDNVVKHSDRTKWYTGPTVLDALNALKEPQKPVNLPLRIPVQDVYSISGVGTVPVGRVETGVLKKGDKVIFEPAHVSGEVKSIEIHHQEIPEAYPGDNIGWNVRGIGKNDIRRGDVCGH-VDNPPTVAKEFTAQ 323
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.870e-62 Identity = 120/230 (52.17%), Postives = 155/230 (67.39%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A++++ T G E QT+EH L+ TLG+ Q+I NKMDA YS+ +Y+E +++ + VG+ P + PF+PIS F GDN+ E S N WYKGPTLL ALD P PTDKPLRLP+QDVY I G+GTVPVGRVETG+LK G ++F P+ +T EVKS+EMHHE EALPGDNVGFNV+ ++ D++RG V ++ P A FT+Q Sbjct: 102 MITGASQADAAIIVVSGTEGPME-------QTKEHVFLSKTLGINQIIVAINKMDAVN--YSEEKYNEAKDKMTKLIMSVGFKPAETPFIPISAFCGDNIKEASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRVETGILKKGQKISFMPANVTGEVKSIEMHHEEFPEALPGDNVGFNVRGIAKNDVRRGDVCGPIENPPTV-AEEFTAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.393e-62 Identity = 124/231 (53.68%), Postives = 153/231 (66.23%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTN-LDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G FEAGIS GQTREH LA T+GV Q++ NKMD T YSK RY+EI ++ L+ VGY D+IPF+P S +EG N+ +R+ WY GP L EA D EP RP DKPLR+P+QDVY I G+GTVPVGRVETGVLK G + P EVKS+E HH L EA+PGDN+GFNVK V L+RG VA ++ + P A FT + Sbjct: 102 MITGASQADVALLVVSAKEGEFEAGISPAGQTREHVFLAKTMGVDQLVVAINKMD--TVNYSKERYEEIKNQLIRLLRMVGYKVDEIPFIPTSAWEGVNVSKRTPEKTPWYDGPCLYEAFDFFKEPPRPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGDKIIINPPKAVGEVKSIETHHTPLQEAIPGDNIGFNVKGVEKSQLRRGDVAGHTTNPPTV-AEEFTGR 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.424e-61 Identity = 121/226 (53.54%), Postives = 158/226 (69.91%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVLI+ +T G QT+EHA LA TLG+ +I NKMDA KY + R+ E+ +V+ L+ +GY P +PIS +EGDN++++S + WY GPTL+EALDQI EP++PTDKPLR+P+QDVY I G+GTVPVGRVETGVLK G ++ F P+ + EVKS+EMHHES+ EALPGDN+GFNV+ V D+KRG VA ++ + P Sbjct: 100 MITGASQADAAVLIVAATDGVMP-------QTKEHAFLARTLGINHIIVGVNKMDAV--KYDEKRFKEVATQVTKLLQMLGYK--NFPVIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGDVIIFEPASTIFHKPIQGEVKSIEMHHESMPEALPGDNIGFNVRGVGKNDIKRGDVAGHTTNPP 314
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 2.429e-61 Identity = 122/230 (53.04%), Postives = 160/230 (69.57%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITGTSQAD A+L+I + G G+ + QTREHA LA TLGV Q++ NKMDAT P +S+ R++E+ + LK +GY FVPISG++GDN+ + S N+ WYKGP+LL+ALD P++P +KPLR+P++DVY I GIGTVPVGRVETGVLKPG V F P+ +VKS+EMHHE L +A PGDN+GFNV+ ++ D+KRG V + D P FT+Q Sbjct: 102 MITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQIVVAINKMDATEPPFSEKRFNEVKADAEKLLKTIGYKD--ATFVPISGYKGDNVTKPSPNMPWYKGPSLLQALDAFKVPEKPINKPLRVPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPADKQGDVKSIEMHHEPLQQAEPGDNIGFNVRGIAKNDIKRGDVCGH-LDSPPTVVRAFTAQ 323
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.144e-61 Identity = 117/230 (50.87%), Postives = 161/230 (70.00%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITGTSQAD AVL++ + G G+ QT+EHA LA TLGV Q+I NKMDAT P YS+ R++E+ E++ L +G+ +P +P+SG++GDN+++ S NL W+KGPTL+EAL+ + P +P DKPLRLP++DVY I GIGTVPVGR+ETGV+K G V F P+ +VKS+EMHHE + +A PGDN+GFNV+ ++ +LKRG V + + P FT+Q Sbjct: 102 MITGTSQADAAVLVVSAREG---EGVM--AQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVKDEITKLLTPIGFK--NVPIIPLSGYKGDNIMKPSPNLSWWKGPTLMEALNALQVPAKPVDKPLRLPVEDVYSITGIGTVPVGRIETGVMKVGDKVIFMPANKAGDVKSIEMHHEPMQQAGPGDNIGFNVRGIAKNELKRGDVCGPANNPPTV-VKGFTAQ 323 The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bpback to top |