FC931030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.068e-61 Identity = 117/230 (50.87%), Postives = 156/230 (67.83%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ G QT+EH L+ TLG+ Q+I NKMD Y + +++ + EV++ +K VGY P + F+P+S FEGDN+ +S N WYKG TL+EALD + P++P D PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P+G++ EVKS+EMHHE + +A PGDN+GFNV+ V D++RG VA + D+P K A FT+Q Sbjct: 92 MITGASQADAAVLVVAVDDGVMP-------QTKEHVFLSRTLGINQLIVAINKMDLVN--YDEEKFNALKDEVAALIKTVGYKPSDVEFIPLSAFEGDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGENVIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGH-LDNPPKVAKEFTAQ 311
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.068e-61 Identity = 119/230 (51.74%), Postives = 151/230 (65.65%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA KYS+ RY+E+ KEVS L VG+ D +PF+P S FEGDN+ + S N WY GP LLE L+ + P +P PLR+P+QD Y I GIGTVPVGRVETG++K G VTF PSG T EVKS+EMHHE +A+PGDN+G+NV+ + D++RG V + D P A FT Q Sbjct: 101 MITGASQADAAVLVVAAPDGVM-------AQTKEHVFLSRTLGINQLIVAINKMDAA--KYSEDRYNEVKKEVSQLLGMVGFKADDVPFIPTSAFEGDNITKSSANTPWYTGPALLECLNNLTVPSKPDTLPLRIPVQDAYTISGIGTVPVGRVETGIMKKGQKVTFMPSGATGEVKSIEMHHEEWDQAVPGDNIGWNVRGIGKNDVRRGDVCGPA-DKPPSVADEFTGQ 320
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.232e-61 Identity = 115/230 (50.00%), Postives = 159/230 (69.13%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMD YS+ +++E+ +E+ + + VG+ P +PF+P+S FEGDN+ E+S+N WYKG TL++ LD ++EP +P D PLRLP+QDVY I G+GTVPVGR+ETG+LK + F P+G+T EVKS+EMHHE L +A PGDNVGFNV+ V D+KRG VA +++ P+ A F +Q Sbjct: 92 MITGASQADAAVLVVAANDGIMP-------QTKEHIFLSRTLGINQLIIAINKMDVVD--YSEDKFNELKEELGALISTVGFKPSDVPFIPVSAFEGDNISEKSSNTPWYKGNTLVQELDALDEPDKPVDLPLRLPIQDVYSITGVGTVPVGRIETGILKTAENIAFEPAGVTGEVKSIEMHHEVLDKAEPGDNVGFNVRGVGKNDIKRGDVAGTTQNPPSV-AKEFKAQ 311
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.232e-61 Identity = 115/230 (50.00%), Postives = 156/230 (67.83%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA YS+ARY E+V++VS LK +G+ P +IPF+P S F GDN+++ S WYKGP ++EAL+ + EP++P+ PLR+P++D Y I GIGTVPVGRVETGV+K G V F P G EVKS+EMHHE + +A PGDN+G+NV+ + D++RG V ++ D+P K A F Q Sbjct: 102 MITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAVD--YSEARYKEVVEQVSGILKMIGFKPSEIPFIPTSAFHGDNIMKLSDKTPWYKGPAIMEALNSLKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVMKKGDKVVFMPGGAGGEVKSIEMHHEEIPQATPGDNIGWNVRGIGKNDVRRGDVCGHA-DNPPKVADEFVGQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.575e-60 Identity = 119/230 (51.74%), Postives = 154/230 (66.96%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++D QTREH LA TLG+ Q+I NKMD Y + Y+ + VS LK VGY D+IPF+P+S + GDN+ ++S WY GPTLLEA D + P++ DKPLR+P+QDVY I G+GTVPVGRVE+GVL+ G V F P+G++ EVKS+EMHHE + EA PGDN+GFNV+ VS KD++RG VA + D+P +FT+Q Sbjct: 102 MITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRVN--YDQKEYEAAKEAVSKLLKMVGYKVDEIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISGVGTVPVGRVESGVLRVGDKVVFEPAGVSGEVKSIEMHHEPIQEAYPGDNIGFNVRGVSKKDIRRGDVAGH-PDNPPTVVKDFTAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.686e-60 Identity = 116/230 (50.43%), Postives = 155/230 (67.39%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G E QT+EH LA TLG+ Q+I NKMDA K+ + R++E+ KE+S +K VGY P++ F+PIS +G N+ S WYKGP L+ ALD EP +PTDKPLRLP+QD Y I GIGTVPVGRVETG++K GM V+F P+ E+KS+EMHHE + +A+PGDNVGFNV+ ++ D++RG V ++ P A FT+Q Sbjct: 102 MITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLFIPISSLQGINIKANSPETPWYKGPALIPALDTFKEPSKPTDKPLRLPIQDSYSISGIGTVPVGRVETGIMKKGMKVSFMPANKDGEIKSIEMHHEEIPQAVPGDNVGFNVRGIAKGDIRRGDVCGPAEQPPTV-ADEFTAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.582e-60 Identity = 117/230 (50.87%), Postives = 154/230 (66.96%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G E QT+EH LA TLG+ Q++ NKMDA Y + R++E+ KE++ + VGY +I F+P+S F+G N+ ++S WY GPTLLEALD EP +PTDKP RLP+QDVY I GIGTVPVGR+ETG++K GM V+F P+ E+KS+EMHHE +ALPGDNVGFNV+ V D++RG V + D P A FT+Q Sbjct: 102 MITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQLVIAINKMDAVN--YDQKRFEEVKKELTQLIGMVGYKAAEILFIPMSSFKGVNISKKSPETPWYTGPTLLEALDTFKEPDKPTDKPFRLPIQDVYSISGIGTVPVGRIETGIMKKGMKVSFMPANKDGEIKSIEMHHEEQPQALPGDNVGFNVRGVGKNDIRRGDVCGPA-DIPPTVADEFTAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.582e-60 Identity = 113/230 (49.13%), Postives = 156/230 (67.83%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+A+Y E+V++VS LK +G+ P IPF+P S F GDN+ + S WYKGP +++ALD++ EP++P+ PLR+P++D Y I GIGTVPVGRVETGV+K G V F P G EVKS+EMHHE + +A PGDN+G+NV+ + D++RG V ++ D+P K A F Q Sbjct: 102 MITGASQADAAILVVAAPDGVM-------AQTKEHIFLSRTLGINQLIIAINKMDAV--EYSEAKYKEVVEQVSGLLKMIGFKPANIPFIPTSAFMGDNITKLSEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVMKKGDKVIFMPGGAGGEVKSIEMHHEEIPQAYPGDNIGWNVRGIGKNDVRRGDVCGHT-DNPPKVADEFVGQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.984e-60 Identity = 118/226 (52.21%), Postives = 156/226 (69.03%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY P +PIS +EG+N++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G +V F P+ + EVKS+EMHHE L EALPGDN+GFNV+ VS D+KRG VA ++ + P Sbjct: 102 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMVN--YNQKRFEEVKAQVEKLLKMLGYKD--FPVIPISAWEGENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPP 316
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.984e-60 Identity = 118/226 (52.21%), Postives = 156/226 (69.03%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y++ R++E+ +V LK +GY P +PIS +EG+N++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+GTVPVGRVETG L+ G +V F P+ + EVKS+EMHHE L EALPGDN+GFNV+ VS D+KRG VA ++ + P Sbjct: 100 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVAINKMDMVN--YNQKRFEEVKAQVEKLLKMLGYKD--FPVIPISAWEGENVVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLRVGEVVIFEPASTIFHKPIQGEVKSIEMHHEPLEEALPGDNIGFNVRGVSKNDIKRGDVAGHTTNPP 314 The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bpback to top |