FC931030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.984e-60 Identity = 111/230 (48.26%), Postives = 154/230 (66.96%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG S+ADCA+L++ + G + I+ GQ REHA L TLGV Q+I NKMD + KYS+ Y + V++ +K VGY + +PF+P+SG++GDN+++RS N+ WYKG TLLE+ D ++P KPLR+P+QDVY I G+GTVPVGRVETG +KPG + PSG E+KS+E HH + A GDN+GFN++ + KD+KRG V + +P K A F +Q Sbjct: 106 MITGASEADCAILVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAVNKMDDS--KYSEEAYKKTVEKGEGLVKSVGYKLENVPFIPVSGWKGDNLVKRSENMPWYKGKTLLESFDDFKMAEKPVGKPLRVPIQDVYTITGVGTVPVGRVETGTMKPGDKIVVMPSGAQGEIKSIETHHTEMPSAEAGDNIGFNLRGIEKKDIKRGDVLGDPA-NPPKVAKEFLAQ 332
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.333e-59 Identity = 115/230 (50.00%), Postives = 155/230 (67.39%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD VL++ + G QT+EH L+ TLG+ Q+I NK+D Y +A+++E+ EVS+ +K VG+NP +PF+P+S FEGDN+ + S N WYKG TL++ALD + P++P PLR+P+QDVY I G+GTVPVGRVETGV+K G V F P+G + EVKS+EMHHE+ A PGDN+GFNV+ V D++RG VA + D PA A F +Q Sbjct: 92 MITGASQADAGVLVVAADDGVMP-------QTKEHVFLSKTLGINQLIVAINKIDLVD--YDEAKFNELKDEVSALIKTVGFNPADVPFIPVSAFEGDNIKDASPNTSWYKGDTLMQALDNLAAPEKPVSLPLRIPIQDVYSITGVGTVPVGRVETGVMKKGENVIFEPAGASGEVKSIEMHHETFETAEPGDNIGFNVRGVGKNDIRRGDVAGHVDDAPAV-AKEFDAQ 311
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.970e-59 Identity = 114/230 (49.57%), Postives = 153/230 (66.52%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ RY E+V++VS LK +G+ P IPFVP S F GDN++ S WYKG T++EAL+ + P++P+ PLR+P++D Y I GIGTVPVGRVETG +K G V F P G EVKS+EMHHE + +ALPGDN+G+NV+ + D++RG V ++ D+P K A F Q Sbjct: 102 MITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVVNHSEKTPWYKGVTMMEALNNLKVPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGTMKKGDKVVFMPGGAAGEVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.879e-59 Identity = 117/231 (50.65%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL+++ ++GI QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + L K +G+NP++I FVP++ GDN+ ++S WYKGPT+ E +D P++PT+ PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A++FT+Q Sbjct: 102 MITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERTPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-ATDFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.640e-59 Identity = 117/231 (50.65%), Postives = 159/231 (68.83%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL+++ ++GI QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + L K +G+NP++I FVP++ GDN+ ++S WYKGPT+ E +D P++PT+ PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A++FT+Q Sbjct: 102 MITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERNPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYTITGVGTVPVGRVETGIIKPGDKVVFEPAGAIGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-ATDFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.128e-58 Identity = 117/231 (50.65%), Postives = 156/231 (67.53%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NPD I FVP++ GDN+ ++S WY GPTL E +D P++PT PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A++FT+Q Sbjct: 102 MITGASQADAAILVVNVDDA--KSGIQP--QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.128e-58 Identity = 119/231 (51.52%), Postives = 155/231 (67.10%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL+ D +A QTREH L TLGV Q+ NKMD T YS+ Y +V +S+ L K +GYNP I FVP++ F GDN +++S + WYKGPTL+E +D N P++PT+ PLR+P+QDVY I G+GTVPVGRVETGV+KPG V F P+G++ E+K++E HHE L +A PGDNVGFNV+ V KD+K+G V + + P A FT+Q Sbjct: 102 MITGASQADAAVLVCDVN----DAKTGLQPQTREHIFLIRTLGVNQLAVAINKMD--TVDYSEEEYKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVSGEIKTIEAHHEQLPKAEPGDNVGFNVRGVGKKDIKKGDVLGHPDNIPTV-AEEFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.474e-58 Identity = 117/231 (50.65%), Postives = 157/231 (67.97%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NPD I F+P++ GDN+ ++S N WY GPTL + +D P++PT PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A++FT+Q Sbjct: 102 MITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLSRTLGITQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNIDFIPVASLLGDNVFKKSENTPWYNGPTLAQVIDGFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.925e-58 Identity = 115/226 (50.88%), Postives = 153/226 (67.70%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L +GY P +PIS +EGDN++++S + WY GPTL+EALDQI EP +PTDKPLR+P+QDVY I G+GTVPVGRVETGVL+ G +V F P+ + EVKS+EMHHE + EALPGDN+GFNV+ V D+KRG VA ++ + P Sbjct: 100 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIGHIIVAINKMDMVD--YDEKKFKQVSEQVKKLLMMLGYKD--FPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPP 314
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.925e-58 Identity = 115/226 (50.88%), Postives = 152/226 (67.26%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L+ +GY P +PIS +EGDN++++S + WY GPTLLEALDQI EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G +V F P+ + EVKS+EMHHE L EA PGDN+GFNV+ V D+KRG VA ++ + P Sbjct: 100 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDEKKFKQVAEQVKKLLQMLGYKD--FPIIPISAWEGDNVVKKSDKMPWYNGPTLLEALDQIPEPPKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPP 314 The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bpback to top |