FC931030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.514e-58 Identity = 116/231 (50.22%), Postives = 156/231 (67.53%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NPD I FVP++ GDN+ ++S WY GPTL E +D P++PT PLRLP+QDVY I G+GTVPVGRVETG+++PG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A++FT+Q Sbjct: 102 MITGASQADAAILVVNVDDA--KSGIQP--QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPDNITFVPVASLHGDNVFKKSDKTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIRPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.283e-58 Identity = 116/226 (51.33%), Postives = 152/226 (67.26%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++++ +V LK +GY P +PIS +EGDN++++S + WYKGPTL+EALDQI EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G +V F P+ + EVKS+EMHHE L EA PGDN+GFNV+ V D+KRG VA ++ + P Sbjct: 100 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDQKVFEKVKAQVEKLLKMLGYKD--FPVIPISAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPP 314
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 7.315e-58 Identity = 113/226 (50.00%), Postives = 151/226 (66.81%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ T G QT+EHA LA TLG+ ++ NKMD Y + ++ + ++V L +GY P +PIS +EGDN++++S + WY GPTL+EALDQ+ EP +PTDKPLR+P+QDVY I G+GTVPVGRVETGVL+ G +V F P+ + EVKS+EMHHE + EALPGDN+GFNV+ V D+KRG VA ++ + P Sbjct: 100 MITGASQADAAVLVVAVTDGVMP-------QTKEHAFLARTLGINNILVAVNKMDMVN--YDEKKFKAVAEQVKKLLMMLGYK--NFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPP 314
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.553e-58 Identity = 116/231 (50.22%), Postives = 155/231 (67.10%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD A+L+++ ++GI QTREH L+ TLG+ Q+ NKMD T +S+A Y+E+ K + L K VG+NP I FVP++ GDN+ ++S WY GPTL E +D P++PT PLRLP+QDVY I G+GTVPVGRVETG++KPG V F P+G E+K+VEMHHE L A PGDN+GFNV+ V KD+KRG V ++ + P A++FT+Q Sbjct: 102 MITGASQADAAILVVNVDDA--KSGIQP--QTREHVFLSRTLGISQLAVAINKMD--TVNFSEADYNEMKKMLGDQLLKMVGFNPANITFVPVASLHGDNVFKKSDRTPWYNGPTLAEVIDAFQPPEKPTTLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVIFEPAGAVGEIKTVEMHHEQLPSAEPGDNIGFNVRGVGKKDIKRGDVLGHTTNPPTV-AADFTAQ 325
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57 Identity = 116/226 (51.33%), Postives = 151/226 (66.81%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V LK +GY P +P S + GDN++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G +V F P+ + EVKS+EMHHE L EALPGDN+GFNV+ VS D+KRG VA ++ P Sbjct: 100 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLKTLGYKD--FPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPP 314
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.248e-57 Identity = 112/220 (50.91%), Postives = 143/220 (65.00%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMDA Y + RY+++ EVS LK +GY+P KI FVP+S +GDN+ +S N WY+GPTLLE LD P RPTDKPLR+P+QDV+ I G GTV VGRVETGVLK G V P +V+S+E HH L +A PGDNVG NV+ ++ +D+KRG V + P Sbjct: 112 MIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAVN--YDQKRYEQVKAEVSKLLKLLGYDPSKIHFVPVSAIKGDNVRTKSPNTPWYQGPTLLEVLDTFQPPPRPTDKPLRMPIQDVFSITGAGTVVVGRVETGVLKVGDKVVIVPPAKVGDVRSIETHHMKLEQAQPGDNVGVNVRGINKEDVKRGDVLGKVDNIP 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.630e-57 Identity = 112/220 (50.91%), Postives = 142/220 (64.55%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMD Y + RY+++ EVS LK +GY+P KI FVP+S +GDN+ +S+N WY GPTLLE LD P RPTDKPLRLP+QDV+ I G GTV VGRVETGVLK G V P +V+S+E HH L +A PGDNVG NV+ ++ +D+KRG V + P Sbjct: 112 MIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVVN--YDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVSAVKGDNVRTKSSNTPWYNGPTLLEVLDTFQPPPRPTDKPLRLPIQDVFSITGAGTVVVGRVETGVLKAGDRVVVVPPAKVGDVRSIETHHMKLEQAQPGDNVGVNVRGINKEDVKRGDVLGKVDNIP 329
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.630e-57 Identity = 118/230 (51.30%), Postives = 152/230 (66.09%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711 MITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y + +Y +V EV+ L++V +N + F+P S FEGDN+ E S N WY GP+LLEAL+ + EP+ PTD PLRLP+QDVY I GIGTVPVGRVETG+L G V+F PS ++ EVK+VEMHHE + +A PGDNVGFNV+ V D++RG V + DDP A F +Q Sbjct: 102 MITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIDELIIAVNKMDLVD--YDENKYKAVVDEVNQLLEQVRFNTEDAKFIPTSAFEGDNVSEASENTSWYDGPSLLEALNDLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGILNTGDNVSFQPSDVSGEVKTVEMHHEEVPKAEPGDNVGFNVRGVGKDDIRRGDVCGPA-DDPPSVAETFQAQ 321
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.630e-57 Identity = 115/226 (50.88%), Postives = 150/226 (66.37%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSG------LTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L+ +GY P +P S + GDN++++S + WY GPTL+EALDQI EP++P DKPLR+P+QDVY I G+GTVPVGRVETG LK G +V F P+ + EVKS+EMHHE L EALPGDN+GFNV+ VS D+KRG VA + P Sbjct: 100 MITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLRTLGYKD--FPVIPTSAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHPDKPP 314
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.087e-57 Identity = 111/220 (50.45%), Postives = 142/220 (64.55%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDP 681 MI G SQAD A+ +I + G FE I GQ REH L TLGV+Q++ NKMD Y + RY++I EVS LK +GY+P KI F+P+S +GDN+ +S+N WY GPTLLEALD P RP DKPLR+P+QDV+ I G GTV VGRVETGVLK G V P +V+S+E HH L +A PGDN+G NV+ +S +D++RG V + P Sbjct: 112 MIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIVN--YDQKRYEQIKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNVKTKSSNTPWYNGPTLLEALDTFQPPPRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVPPAKVGDVRSIETHHMKLEQAQPGDNIGVNVRGISKEDVRRGDVLGKVDNVP 329 The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bpback to top |