FC931030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EFTU_NITSB (Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 73/217 (33.64%), Postives = 109/217 (50.23%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYV 657 MITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + EV L + + D +P + S + + +W K L+EA+D+ I P+R DKP +P++DV+ I G GTV GR+E GV+K G IV P+ TT V VEM + L + GDNVG ++ ++++RG V Sbjct: 92 MITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKEDMVD---DPELLELVEMEVRELLNEYDFPGDDVPVIAGSALKALEEAKEGKLGEWSEKILKLMEAVDEYIPTPERDIDKPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDEIEIVGLRPTQKTT-VTGVEMFRKELDQGEAGDNVGVLLRGTKKEEVERGQV 297
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EFTU_NEPOL (Elongation factor Tu, chloroplastic OS=Nephroselmis olivacea GN=tufA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 75/222 (33.78%), Postives = 114/222 (51.35%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNL-----DWY-KGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYV 657 MITG +Q D A+L++ G QT+EH LLA +GV ++ NK D + + + EV L + D++P VP S + + +L +W K L++A+DQ I PKR TDK + ++DV+ I G GTV GRVE G +K G IV P+ TT V +EM ++L +++ GDNVG ++ + +D++RG V Sbjct: 93 MITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPNIVVFLNKQDQVD---DEELLELVELEVRETLSNYEFPGDEVPVVPGSALLALEAMTENPSLKRGENEWVDKIFALMDAVDQYIPTPKRDTDKSFLMAVEDVFSITGRGTVATGRVERGSVKLGDTIEIVGLKPTRETT-VTGLEMFQKTLDQSVAGDNVGILLRGIQKEDIQRGMV 303
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EFTU_DESDG (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain G20) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 77/222 (34.68%), Postives = 110/222 (49.55%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTL--LEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-MIVTFG-PSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSK 672 MITG +Q D A++++ +T G QTREH LLA +GV ++ NK D + + + EV L + D P + S + +E + D P L L+A D I EP+R TDKP +P++DV+ I G GTV GRVE G++K G I G +TT VEM + L + GDNVG ++ V D++RG V + K Sbjct: 92 MITGAAQMDGAIIVVAATDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELLELVELEVRELLSSYDFPGDDTPVIRGSALKA---LECDSADDDAAKPILELLDACDSYIPEPERDTDKPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEQIEIVGIKDTMTTTCTGVEMFRKLLDQGQAGDNVGVLLRGVKRDDVERGQVLAAPK 300
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EFTU_DESDA (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 79/226 (34.96%), Postives = 109/226 (48.23%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFV---PISGFEGD--NMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSK 672 MITG +Q D +L++ +T G QTREH LLA +GV Q++ NK D + + + EV L + D +P + + E D N E LD LL+A D I EP R DKP +P++DV+ I G GTV GRVE GV+K G IV P+ TT VEM + L + GDN+G ++ D++RG V + K Sbjct: 92 MITGAAQMDGGILVVAATDGPMP-------QTREHILLARQVGVPQLVVFLNKCDLVD---DEELLELVELEVRELLSSYDFPGDDVPVIRGSALKALESDDPNSAEAKCILD------LLDACDSFIPEPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEVEIVGIKPTVKTT-CTGVEMFRKLLDQGEAGDNIGALLRGTKRDDVERGQVLAAPK 300
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 76/218 (34.86%), Postives = 109/218 (50.00%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVP---ISGFEGDNMIERSTNLDWYKGPTLLEALDQ-INEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLT--TEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYV 657 MITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D K D + EV L + + ++IP V + EGD L L+EA+D I P+R TDKP +P++DV+ I G GTV GRVE G++K G V T T V VEM + L E GDN+G ++ + ++++RG V Sbjct: 92 MITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGDK-----GELGEQAIFKLMEAVDAYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEVVGLKATAKTVVTGVEMFRKLLDEGRAGDNIGALLRGLKREEVERGQV 294
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: CYSN_VIBC3 (Sulfate adenylyltransferase subunit 1 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=cysN PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 63/192 (32.81%), Postives = 100/192 (52.08%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPG 597 M TG S D AV++ID+ G + QTR H+ ++ LG+K I NKMD YS+ R+++I E + K + +I +P+S EGDN++E+S +DWY+GP+LLE L+ ++ + + R P+Q V + G + +GV+K G + PSG T+ V + L +A G Sbjct: 123 MATGASTCDLAVILIDARKGVLD-------QTRRHSFISNLLGLKHFIVAVNKMDLVD--YSQDRFEQIRAEYLEFSKHL-QGETEIQIIPLSALEGDNVVEKSRLMDWYQGPSLLELLENVDIDRDKSSGAFRFPVQYVNRPNLDFRGFAGTIASGVVKVGDKIKALPSGKTSTVTRIVTFDGDLPQAQAG 304
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: CYSN_SALTY (Sulfate adenylyltransferase subunit 1 OS=Salmonella typhimurium GN=cysN PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 70/227 (30.84%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRG--YVASNSKDDPAKGAS 696 M TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + D I FVP+S EGDN+ +S N+ WY GPTLLE L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + EA G+ + V N + D+ RG +A+N PA+ A+ Sbjct: 124 MATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLVD--YREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITL-VLNDDI-DISRGDLLLAANETLAPARHAA 338
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: CYSN_SALSV (Sulfate adenylyltransferase subunit 1 OS=Salmonella schwarzengrund (strain CVM19633) GN=cysN PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 70/227 (30.84%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRG--YVASNSKDDPAKGAS 696 M TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + D I FVP+S EGDN+ +S N+ WY GPTLLE L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + EA G+ + V N + D+ RG +A+N PA+ A+ Sbjct: 124 MATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLVD--YREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITL-VLNDDI-DISRGDLLLAANETLAPARHAA 338
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: CYSN_SALPB (Sulfate adenylyltransferase subunit 1 OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=cysN PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 70/227 (30.84%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRG--YVASNSKDDPAKGAS 696 M TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + D I FVP+S EGDN+ +S N+ WY GPTLLE L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + EA G+ + V N + D+ RG +A+N PA+ A+ Sbjct: 124 MATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLVD--YREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITL-VLNDDI-DISRGDLLLAANETLAPARHAA 338
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: CYSN_SALHS (Sulfate adenylyltransferase subunit 1 OS=Salmonella heidelberg (strain SL476) GN=cysN PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.220e-20 Identity = 70/227 (30.84%), Postives = 117/227 (51.54%), Query Frame = 1 Query: 22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRG--YVASNSKDDPAKGAS 696 M TG S D A+L+ID+ G + QTR H+ ++ LG+K ++ NKMD Y + + I ++ ++ +++ + D I FVP+S EGDN+ +S N+ WY GPTLLE L+ ++ + +P+R P+Q V + G + +G +K G + PSG+ + V + EA G+ + V N + D+ RG +A+N PA+ A+ Sbjct: 124 MATGASTCDLAILLIDARKGVLD-------QTRRHSFISTLLGIKHLVVAINKMDLVD--YREETFARIREDYLTFAEQLPGDLD-IRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITL-VLNDDI-DISRGDLLLAANETLAPARHAA 338 The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bpback to top |