FC931030

Overview
NameFC931030
Unique NameFC931030
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14166 contig Ccv1_Contig14166:371..1089. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_PORYE (Elongation factor 1-alpha OS=Porphyra yezoensis PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.725e-91
Identity = 165/234 (70.51%), Postives = 192/234 (82.05%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLD----WYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQAD A+L+I S  G FEAGIS++GQTREHALLA+TLGVKQMI  CNKMD     +S+ RY+E+ KE+  YLKKVGYNP K+P VP SG+ G+N+ ER+        WYKGP LLEALD  + PKRP DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPGM+VTF PSGL+TEVKSVEMHHE+L +A PGDNVGFNVKNVSVKDLKRGYV  +SK+DP KG ++F +Q
Sbjct:  102 MITGTSQADLAILVIASPPGEFEAGISQNGQTREHALLAYTLGVKQMIVACNKMDDKNVNWSQDRYEEVSKEMDLYLKKVGYNPAKVPKVPTSGWTGENLFERTDKTHALGKWYKGPCLLEALDNCDPPKRPVDKPLRLPLQDVYKIGGIGTVPVGRVETGLIKPGMVVTFAPSGLSTEVKSVEMHHEALPQAGPGDNVGFNVKNVSVKDLKRGYVCGDSKNDPPKGCASFNAQ 335          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.725e-91
Identity = 170/242 (70.25%), Postives = 193/242 (79.75%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQADCA+LII S TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD  T K+S+ RY+EIVKE S+++KKVGYNP  +PFVPISGF GDNMIE STN  WYKG             TLLEA+D I  P RPTDKPLRLPLQDVYKI GIGTVPVGRVETGV+KPGM+VTF P+ +TTEVKSVEMHH+ L    PGDNVGFNVKNVSVK+++RG VA +SK+DP  G  +F +Q
Sbjct:  103 MITGTSQADCAILIIASGTGEFEAGISKDGQTREHALLAFTLGVRQLIVALNKMD--TCKWSQDRYNEIVKETSNFIKKVGYNPKSVPFVPISGFNGDNMIEASTNCPWYKGWEKETKAGKSTGKTLLEAIDAIEPPVRPTDKPLRLPLQDVYKISGIGTVPVGRVETGVIKPGMVVTFAPANVTTEVKSVEMHHQQLQAGNPGDNVGFNVKNVSVKEVRRGNVAGDSKNDPPAGCDSFNAQ 342          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.725e-91
Identity = 166/242 (68.60%), Postives = 197/242 (81.40%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLG +Q+I   NKMD T  K+S+ RY+EIVKEVS ++KK+G+NP  +PFVPISG+ GDNM++ STN+ W+KG             TLLEA+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +K GM+V F P+ +TTEVKSVEMHHE+L E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK +++FT+Q
Sbjct:  102 MITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGFRQLIVAINKMDTT--KWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDESTNMPWFKGWNKETKAGSKTGKTLLEAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKAGMVVNFAPAAVTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQ 341          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 1.725e-91
Identity = 166/242 (68.60%), Postives = 197/242 (81.40%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQADCA+LII   TG FEAGISKDGQTREHALLAFTLG +Q+I   NKMD T  K+S+ RY+EIVKEVS ++KK+G+NP  +PFVPISG+ GDNM++ STN+ W+KG             TLLEA+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG +K GM+V F P+ +TTEVKSVEMHHE+L E LPGDNVGFNVKNVSVKD++RG V S+SK+DPAK +++FT+Q
Sbjct:  102 MITGTSQADCAILIIAGGTGEFEAGISKDGQTREHALLAFTLGFRQLIVAINKMDTT--KWSQDRYNEIVKEVSGFIKKIGFNPKSVPFVPISGWHGDNMLDESTNMPWFKGWNKETKAGSKTGKTLLEAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTIKAGMVVNFAPAAVTTEVKSVEMHHETLTEGLPGDNVGFNVKNVSVKDIRRGNVCSDSKNDPAKESASFTAQ 341          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_SCHCO (Elongation factor 1-alpha OS=Schizophyllum commune GN=TEF1 PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 2.253e-91
Identity = 168/242 (69.42%), Postives = 196/242 (80.99%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQADCA+L I   TG FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD T  K+S+ R++EIVKE S+++KKVGYNP  + FVPISG+ GDNM+E STN+ WYKG             TLL+A+D I  P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++K GM+VTF PS +TTEVKSVEMHHE L E  PGDNVGFNVKNVSVKD++RG VAS+SK+DPAK A++F +Q
Sbjct:  102 MITGTSQADCAILTIAGGTGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDTT--KWSEDRFNEIVKETSTFIKKVGYNPKTVAFVPISGWHGDNMLEESTNMPWYKGWTKETKAGVVKGKTLLDAIDAIEPPVRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKAGMVVTFAPSNVTTEVKSVEMHHEQLAEGKPGDNVGFNVKNVSVKDIRRGNVASDSKNDPAKEAASFNAQ 341          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_YEAST (Elongation factor 1-alpha OS=Saccharomyces cerevisiae GN=TEF1 PE=1 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.843e-91
Identity = 164/241 (68.05%), Postives = 195/241 (80.91%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTS 708
            MITGTSQADCA+LII    G FEAGISKDGQTREHALLAFTLGV+Q+I   NKMD+   K+ ++R+ EIVKE S+++KKVGYNP  +PFVPISG+ GDNMIE +TN  WYKG             TLLEA+D I +P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF P+G+TTEVKSVEMHHE L + +PGDNVGFNVKNVSVK+++RG V  ++K+DP KG ++F +
Sbjct:  102 MITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSV--KWDESRFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMHHEQLEQGVPGDNVGFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNA 340          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.843e-91
Identity = 163/230 (70.87%), Postives = 194/230 (84.35%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQAD A+L++ +    FE   SK+GQTREHALLAFTLGV+QMI   NKMD  T +Y ++R+DEI  EV  YLKKVGYN +KIPFV ISGF GDNM+ERS  + WYKG TL+EALD +  PKRPTDKPLRLPLQDVYKIGG+GTVPVGRVETG+++PGM VTF P+G+TTEVKSVEMHHE + EA+PGDNVGFNVKNVS+KD+KRG+VAS++K+DPAKG  +FT+Q
Sbjct:  102 MITGTSQADVALLVVPADR--FEGAFSKEGQTREHALLAFTLGVRQMIVGINKMD--TCEYKQSRFDEIFNEVDGYLKKVGYNTEKIPFVAISGFVGDNMVERSDKMPWYKGKTLVEALDTMEPPKRPTDKPLRLPLQDVYKIGGVGTVPVGRVETGIIRPGMNVTFAPAGVTTEVKSVEMHHEQMPEAVPGDNVGFNVKNVSIKDIKRGFVASDAKNDPAKGCEDFTAQ 327          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_ASHGO (Elongation factor 1-alpha OS=Ashbya gossypii GN=TEF PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.561e-91
Identity = 167/241 (69.29%), Postives = 192/241 (79.67%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTS 708
            MITGTSQADCA+LII    G FEAGISKDGQTREHALLA+TLGVKQ+I   NKMD+   K+ ++RY EIVKE S+++KKVGYNP  +PFVPISG+ GDNMIE +TN  WYKG             TLLEA+D I  P RPTDK LRLPLQDVYKIGGIGTVPVGRVETGV+KPGM+VTF PSG+TTEVKSVEMHHE L E +PGDNVGFNVKNVSVK+++RG V  +SK+DP K A +F +
Sbjct:  102 MITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAYTLGVKQLIVAINKMDSV--KWDESRYQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGAVKGKTLLEAIDAIEPPVRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPSGVTTEVKSVEMHHEQLEEGVPGDNVGFNVKNVSVKEIRRGNVCGDSKNDPPKAAESFNA 340          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 8.561e-91
Identity = 163/229 (71.18%), Postives = 188/229 (82.10%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTS 708
            MITGTSQAD A+LII S TG FEAGISK+GQTREHALLA+T+GVKQM+   NKMD+T P YS+ RY+EI KEVS++L KVGY P K+ FVPISGF+GDN+ E STN+ WYKGPTL  ALD    PKRP  KPLRLPLQDVYKIGGIGTVPVGRVETGVLK GM++TF P G + E KSVEMHHE + EA PG+NVGFNVK +SVKD+KRG+VAS+SK+DPA    +F S
Sbjct:  102 MITGTSQADAAILIIASGTGEFEAGISKEGQTREHALLAYTMGVKQMVVAMNKMDSTEPPYSEDRYEEIKKEVSTFLAKVGYKPAKMNFVPISGFQGDNIQENSTNMPWYKGPTLCAALDSFKIPKRPIAKPLRLPLQDVYKIGGIGTVPVGRVETGVLKAGMVITFAPKGCSAECKSVEMHHEEVPEAAPGNNVGFNVKGLSVKDIKRGFVASDSKNDPATDTESFVS 330          
BLAST of FC931030 vs. ExPASy Swiss-Prot
Match: EF1A_CRYNE (Elongation factor 1-alpha OS=Cryptococcus neoformans GN=TEF1 PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 3.253e-90
Identity = 164/242 (67.77%), Postives = 194/242 (80.17%), Query Frame = 1
Query:   22 MITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTLLEALDQINEPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMIVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVSVKDLKRGYVASNSKDDPAKGASNFTSQ 711
            MITGTSQADCA+LII +  G FEAGISKDGQTREHALLAFTLGV+Q+I  CNKMD  T K+S+ R++EIVKE + ++KKVGYNP  +PFVPISG+ GDNM+E +TN+ WYKG             TLLEA+D I  P RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGV+K GM+V F P+ +TTEVKSVEMHHE + E LPGDNVGFNVKNVS+KD++RG V  +SK+DP   A++F +Q
Sbjct:  102 MITGTSQADCAILIIATGIGEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMD--TCKWSEDRFNEIVKETNGFIKKVGYNPKAVPFVPISGWHGDNMLEETTNMPWYKGWTKETKSGVSKGKTLLEAIDAIEPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVKFAPTNVTTEVKSVEMHHEQIPEGLPGDNVGFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQ 341          
The following BLAST results are available for this feature:
BLAST of FC931030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF1A_PORYE1.725e-9170.51Elongation factor 1-alpha OS=Porphyra yezoensis PE... [more]
EF1A_ASPOR1.725e-9170.25Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A2_RHIRA1.725e-9168.60Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A1_RHIRA1.725e-9168.60Elongation factor 1-alpha OS=Rhizomucor racemosus ... [more]
EF1A_SCHCO2.253e-9169.42Elongation factor 1-alpha OS=Schizophyllum commune... [more]
EF1A_YEAST3.843e-9168.05Elongation factor 1-alpha OS=Saccharomyces cerevis... [more]
EF1A_CRYPV3.843e-9170.87Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1A_ASHGO8.561e-9169.29Elongation factor 1-alpha OS=Ashbya gossypii GN=TE... [more]
EF1A1_EUPCR8.561e-9171.18Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_CRYNE3.253e-9067.77Elongation factor 1-alpha OS=Cryptococcus neoforma... [more]

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Properties
Property NameValue
Genbank descriptionC34100F08EF PostHarvP1 Citrus clementina cDNA clone C34100F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931030 ID=FC931030; Name=FC931030; organism=Citrus clementina; type=EST; length=719bp
ACATCGTGACTTTATTATACCATGATTACTGGTACTTCTCAGGCTGATTG
TGCTGTCCTTATCATCGACTCCACCACTGGTGGTTTTGAAGCTGGTATCT
CTAAGGATGGGCAGACCAGAGAGCACGCTCTACTTGCTTTCACCCTTGGT
GTGAAGCAAATGATTTGTTGCTGTAACAAGATGGATGCCACCACTCCCAA
GTATTCAAAGGCAAGATATGATGAAATTGTTAAGGAAGTCTCTTCCTACT
TGAAGAAGGTTGGCTACAACCCAGATAAGATTCCATTTGTCCCAATCTCT
GGATTTGAGGGTGATAACATGATTGAGAGGTCCACAAACCTTGACTGGTA
CAAGGGCCCAACCCTTCTTGAAGCTCTTGACCAGATCAATGAACCCAAGA
GACCAACAGACAAGCCTCTCCGTCTCCCCCTTCAGGATGTCTACAAGATT
GGTGGTATTGGAACTGTCCCTGTTGGCCGTGTTGAAACTGGTGTACTCAA
GCCCGGTATGATAGTCACATTCGGTCCATCTGGATTGACTACTGAAGTTA
AGTCAGTTGAGATGCACCATGAGTCTCTCCTGGAGGCACTTCCTGGTGAT
AATGTGGGGTTCAACGTTAAGAATGTTTCAGTGAAGGATCTTAAGCGTGG
TTACGTTGCATCTAACTCCAAGGATGATCCCGCCAAGGGGGCATCCAACT
TCACCTCCCAGNTATCATC
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