FC931033

Overview
NameFC931033
Unique NameFC931033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_YEAST (mRNA-capping enzyme subunit alpha OS=Saccharomyces cerevisiae GN=CEG1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 78/291 (26.80%), Postives = 121/291 (41.58%), Query Frame = 1
Query:   13 MIDRCFSFRRVQ-MRFPC--RNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEG-LLKWKYARMNSVDFLF----------EVTDDDRQLLYV-----------------------------FERGKKKLMEGSSVEFTDREPSF------------YSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            MIDR  ++  V   RFP   +   E L E     TLLDGE++I   P ++ QE RYL++D +AIN   + + P   R   L KE  +P  ++    Y +R   +     PF++  K       + K+ K  + KL H +DGL+F     PY     +  LLKWK  + N+VDF             +  DDR   Y                              F+R + +++E +  +F +   S              +G+I+EC  + +   W+ +R R DK   N
Sbjct:   93 MIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP-YFDLRAAYPNRCTTF-----PFKISMKHMDFSYQLVKVAKS-LDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGN 376          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_ASHGO (mRNA-capping enzyme subunit alpha OS=Ashbya gossypii GN=CEG1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 76/277 (27.44%), Postives = 116/277 (41.88%), Query Frame = 1
Query:   52 RFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYY--RYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPY-VPRTHEGLLKWKYARMNSVDFL----FEVTDDDRQ------------------LLYVFERG--------------KKKLME--------GSSVEFTDRE-------PSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            R P  N  E L E     TL+DGE+++   P +R +E RYL++D +AIN  ++++ P   R   L KE  +P        Y     YY  R    PF++  K       ++++    + KL H +DGL+F   D PY V      LLKWK  + N+VDF       V +DD                     LY+++ G               KK +E         + ++ +D +           +G+I+EC  D +   WK +R R DK   N
Sbjct:  106 RLPRANRKELL-ETLQDGTLVDGELVVQTNPATRLRELRYLMFDCLAINGRALVQSPTSSRLAHLGKEFYKP--------YYDLRAYYPDRCATFPFKLSMKHMNFSFDLDRVAGS-LDKLPHVSDGLIFTAVDTPYTVGGKDSTLLKWKPEQENTVDFKMILEIPVVEDDTLPKKDRNRFYYNFDVKPSFHLYIWQGGPDVNTRLHDFEQPFSKKELEILHRTYKVFAELQISDEQWAKMKALEQPLNGRIVECAKDQETGEWKFLRFRDDKLNGN 372          
The following BLAST results are available for this feature:
BLAST of FC931033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MCE1_YEAST6.534e-1426.80mRNA-capping enzyme subunit alpha OS=Saccharomyces... [more]
MCE1_ASHGO6.534e-1427.44mRNA-capping enzyme subunit alpha OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionC34100F11EF PostHarvP1 Citrus clementina cDNA clone C34100F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931033 ID=FC931033; Name=FC931033; organism=Citrus clementina; type=EST; length=721bp
CTTGGCCGGGAGATGATTGATAGGTGTTTCTCTTTTCGAAGGGTCCAGAT
GAGGTTTCCTTGCAGAAACTCAAATGAAGGTTTGGGTGAGAAAACTCATC
ACTTCACATTGCTGGATGGGGAGATGATTATTGACAAATTGCCAGACTCA
CGAAGGCAGGAGAGAAGATACCTTATCTATGATATGATGGCAATTAACCA
AGCGTCTGTCATTGAGCGGCCTTTCTATGAACGGTGGAAGATGCTTGAGA
AAGAAGTCATTGAACCACGGAATTATGAGCGCCACAATATTTACCAGAGT
AGGAACCCTTACTACAGATATGATCTGGAACCATTTAGGGTTAGGAGGAA
AGATTTTTGGTTGCTCTCCACTGTTAACAAGCTGTTAAAGGAGTTTATTC
CAAAGCTTTCGCATGATGCTGATGGTCTTGTTTTCCAGGGCTGGGATGAT
CCTTACGTTCCTCGAACACATGAAGGCCTTTTGAAGTGGAAATATGCTAG
AATGAACTCGGTTGACTTTCTATTTGAGGTGACTGATGATGATCGACAGC
TACTTTATGTATTTGAACGTGGAAAGAAGAAGCTGATGGAAGGGAGTTCA
GTTGAATTTACAGATAGAGAACCGTCTTTTTACTCGGGAAAGATTATTGA
GTGTACTTGGGATCCAGACGTACAGTTATGGAAATGTATGCGGATCAGGA
CTGATAAATCNACCCCGAATG
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