FC931035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus GN=RBM38 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 97 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis GN=rbm24 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 97 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus GN=RBM24 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 97 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis GN=rbm24-B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 97 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis GN=rbm24-A PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 97 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 + FVGGL + TTDSSL + F +GDI E+ +I DR+TG+S G+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: HNRGT_HUMAN (RNA-binding motif protein, X-linked-like-2 OS=Homo sapiens GN=RBMXL2 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 73 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 M AD + F+GGL T + +L F YG I+E ++ DRET +S GF FVTF + A MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDMNGKSLDGKAIKVAQA 84
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: ROC5_NICSY (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = 1 Query: 85 DVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 D + +V L+WA T L +AF+ + +K+I DR +GRS GFGF+TF ++M A++ MN L+GR + +N A Sbjct: 214 DSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVA 293
BLAST of FC931035 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens GN=RBM38 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.306e-11 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 97 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSGGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 324 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+S G+GFVT D + A + N +DGR VN A Sbjct: 35 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 109 The following BLAST results are available for this feature:
BLAST of FC931035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931035 ID=FC931035; Name=FC931035; organism=Citrus clementina; type=EST; length=695bpback to top |