FC931037

Overview
NameFC931037
Unique NameFC931037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC931037 vs. ExPASy Swiss-Prot
Match: YGP7_YEAST (Putative uncharacterized oxidoreductase YGL157W OS=Saccharomyces cerevisiae GN=YGL157W PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 68/222 (30.63%), Postives = 105/222 (47.30%), Query Frame = 2 
Query:   38 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG----CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK--SGTVKRVVYTSSNAAVF----YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPFICPKFAGSVRSSL 661
            V V+G TGFIA  ++  LL  GY+V  + RS+     +N   L    N P  S  +     D++ P+ FD            VLH A+P  FE    E+ +   A+NGT  IL++  K  + TV++V+ TSS AA+      N  D+ + +E+ W+   +     +   +Y  SK   E+ A EF +E+       L T+ P  V GP     FA S++  +
Sbjct:    7 VFVSGATGFIALHIMNDLLKAGYTVIGSGRSQ----EKNDGLLKKFNNNPKLSMEIV---EDIAAPNAFDEVFKKHGKEIKIVLHTASPFHFETTNFEKDLLTPAVNGTKSILEAIKKYAADTVEKVIVTSSTAALVTPTDMNKGDLVITEES-WNKDTWDSCQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLSTINPGFVFGP---QMFADSLKHGI 217
The following BLAST results are available for this feature:
BLAST of FC931037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
YGP7_YEAST3.870e-1130.63Putative uncharacterized oxidoreductase YGL157W OS... [more]

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Properties
Property NameValue
Genbank descriptionC34100G03EF PostHarvP1 Citrus clementina cDNA clone C34100G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931037 ID=FC931037; Name=FC931037; organism=Citrus clementina; type=EST; length=712bp
GGAGAGAGAGGAAAATATGGAAGAGGGTAAAGGAAGAGTCTGTGTAACAG
GTGGTACAGGTTTCATAGCATCTTGGCTGATCATGAGACTTCTTGACCAT
GGTTACTCCGTTACAACCACCGTTCGGTCCGAGCTGGACCCAGAACACAG
GAATTCGAAAGACCTTAGCTTCCTGAAAAATCTACCGGGAGCATCTGAGA
GGCTCCGTATCTTTCATGCCGATCTCAGCCACCCAGATGGCTTCGATGCA
GCTATTGCTGGGTGCACTGGGGTTCTTCATGTTGCCACGCCCGTTGATTT
TGAAGACAAAGAACCTGAGGAAGTTATAACACAAAGAGCAATTAATGGAA
CACTAGGCATCTTAAAATCATGCTTGAAGTCTGGAACGGTGAAGCGAGTT
GTGTACACTTCAAGTAACGCGGCTGTGTTTTACAATGACAAAGATGTTGA
TATGATGGATGAGACATTTTGGAGTGATGTTGATTACATCAGAAAATTGG
ATTCCTGGGGAAAATCGTACGCAATTTCTAAGACATTAACGGAAAGGGCA
GCTCTTGAGTTTGCAGAAGAACATGGATTAGATCTAGTGACACTGATACC
TTCTATGGTTGTTGGTCCCTTCATTTGTCCTAAATTTGCAGGCTCTGTTC
GCTCCTCACTTGCTTTGATATTGGGNTATCGAGAGGAATATGGTTTTCTT
CTCAACACATCA
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