FC931039

Overview
NameFC931039
Unique NameFC931039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.719e-34
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 1
Query:  412 YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y ++  +FE+  KY P I PIG+GAYG+VCS++N ETNE VAIKKI N F+N+IDA RTLRE+ LLRH+ H+N++A++D++ P  R +F DVY+ YELMDTDLHQII+S
Sbjct:   46 YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRS 154          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 1
Query:  412 YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y ++  +FE+  KY P I PIG+GAYG+VCS++N ETNE VAIKKI N F+N+IDA RTLRE+ LLRH+ H+N++A++D++ P  R +F DVY+ YELMDTDLHQII+S
Sbjct:   49 YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSETNESVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRS 157          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.720e-33
Identity = 66/109 (60.55%), Postives = 88/109 (80.73%), Query Frame = 1
Query:  412 YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y ++  +FE+  KY P I PIG+GAYG+VCS++N ET E+VAIKKI N F+N+IDA RTLRE+ LLRH+ H+N++A++D++ P  R SF DVY+ YELMDTDLHQII+S
Sbjct:   53 YNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRS 161          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.246e-33
Identity = 66/120 (55.00%), Postives = 93/120 (77.50%), Query Frame = 1
Query:  385 GMRSRGKHY--YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            G  + G  Y  Y ++  LFE+ +KYVP I+P+GRGA G++C+ +N +T ++VAIKKI N F+N+IDA RTLRE+ LLRH+ HDNVI++KD++ P  R +F DVY+VYELMDTDLH +++S
Sbjct:   36 GTLTHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGACGIICAVVNAQTRQEVAIKKIGNAFDNQIDAKRTLREIKLLRHMDHDNVISIKDIIRPPRRENFNDVYIVYELMDTDLHHLLRS 155          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.933e-33
Identity = 67/109 (61.47%), Postives = 85/109 (77.98%), Query Frame = 1
Query:  412 YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y +    FE+ +KY+P I+P+GRGAYG+VC + N ET E+VAIKKI N FENRIDA RTLRE+ LL H+ H+N+I +KD++ P  R  F DVY+VYELMDTDLHQII+S
Sbjct:   24 YNVLGNFFEVTSKYIPPIQPVGRGAYGMVCCATNSETKEEVAIKKIGNAFENRIDAKRTLREIKLLSHMDHENIIKIKDIVRPPDREEFNDVYIVYELMDTDLHQIIRS 132          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.831e-33
Identity = 64/114 (56.14%), Postives = 93/114 (81.58%), Query Frame = 1
Query:  400 GKHY-YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            G+++ Y ++  LFE+  KYVP I+PIGRGAYG VC++++ ET+E++AIKKI   F+N++DA RTLRE+ LLRH++H+NV+ +KD++ P  +  F DVY+V+ELMDTDLHQII+S
Sbjct:   24 GRYFQYNVYGNLFEVSNKYVPPIRPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRS 137          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.831e-33
Identity = 69/112 (61.61%), Postives = 89/112 (79.46%), Query Frame = 1
Query:  412 YMMWQTL---FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y+M+  L   FE+ +KY+P I+PIGRGAYG+VC + N ETNE+VAIKKI N F+NR+DA RTLRE+ LL H+ HDNVI +KD++    +  F+DVY+VYELMDTDLHQII+S
Sbjct:   16 YVMYNVLGNIFELSSKYIPPIEPIGRGAYGIVCCATNSETNEEVAIKKIANAFDNRVDAKRTLREIKLLSHMDHDNVIKIKDIIELPEKERFEDVYIVYELMDTDLHQIIRS 127          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.831e-33
Identity = 68/120 (56.67%), Postives = 93/120 (77.50%), Query Frame = 1
Query:  385 GMRSRGKHY--YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            G+ + G  Y  Y ++  LFE+  KYVP I+ +GRGAYG+VC+++N ET E+VAIKKI N F+NRIDA RTLRE+ LLRH+ H+NV+++KD++ P  + +F  VY+V ELMDTDLHQII+S
Sbjct:   12 GVPTHGGRYLQYNIYGNLFEVSRKYVPPIRSVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNHVYIVSELMDTDLHQIIRS 131          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.535e-33
Identity = 66/109 (60.55%), Postives = 86/109 (78.90%), Query Frame = 1
Query:  412 YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y ++  +FE+  KY P I PIG+GAYG+VCS+ N ETNE VA+KKI N F+N+IDA RTLRE+ LLRH+ H+NV+A++D++ P  R  F DVY+ YELMDTDLHQII+S
Sbjct:   41 YNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRS 149          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32
Identity = 65/109 (59.63%), Postives = 86/109 (78.90%), Query Frame = 1
Query:  412 YMMWQTLFEIDTKY-VPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            Y ++  +FE+  KY  PI PIG+GAYG+VCS+ N ETNE VA+KKI N F+N+IDA RTLRE+ L+RH+ H+NV+A++D++ P  R  F DVY+ YELMDTDLHQII+S
Sbjct:   48 YNIFGNIFEVTAKYRPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRS 156          
The following BLAST results are available for this feature:
BLAST of FC931039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
NTF4_TOBAC7.719e-3460.55Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MPK6_ARATH1.720e-3360.55Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MPK1_ORYSJ1.720e-3360.55Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
MPK2_ORYSJ2.246e-3355.00Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
NTF6_TOBAC2.933e-3361.47Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK5_ARATH3.831e-3356.14Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MPK13_ARATH3.831e-3361.61Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
MMK2_MEDSA3.831e-3356.67Mitogen-activated protein kinase homolog MMK2 OS=M... [more]
MMK1_MEDSA6.535e-3360.55Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MAPK_PEA1.456e-3259.63Mitogen-activated protein kinase homolog D5 OS=Pis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100G05EF PostHarvP1 Citrus clementina cDNA clone C34100G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931039 ID=FC931039; Name=FC931039; organism=Citrus clementina; type=EST; length=736bp
GATAAATTATTCGCCCTCTCTCTCAGGCTCAGGCTCAGGCTCGGCTCTGA
ATCCGATCGCGACGAGATAAGGAATCTCACAGATCGGATAAACCATTTAG
ATCCCATCGGATCAGACATTCAGAATATAGATGCAATGTAATTTGTATTT
AAGCGACGAACTCGCTGCTCCCCTTTGAATTCCGAATTTTTGTTTTTGAC
GAATCAGCGAAGAAGCTTCTTATATTGCATTCCATTGAGCTGCTTTGGGG
ATGGTTAATTGGCTGAAAAGTGCAAAAGTTTACTACTTGGAAAAGTAGGT
GAGAAGAGAATCAGCGATCGCGAAACATCAAAGCAAACAAGTCGTAGCGG
CAAGGAGATGGCCACTCTGGTTGAACCTCCAAATGGGATGAGGTCAAGAG
GGAAGCATTATTACATGATGTGGCAAACATTGTTTGAAATTGATACAAAG
TACGTTCCAATCAAACCAATTGGTCGGGGAGCATACGGGGTTGTCTGTTC
TTCCATCAATAGGGAGACGAACGAGAAAGTTGCGATCAAGAAGATCAATA
ATGTGTTTGAGAATCGAATCGATGCATTGAGAACTTTGAGGGAGTTGGTG
CTGCTCAGACATATTAAGCATGACAATGTTATTGCTTTGAAGGATGTTAT
GATGCCTACTCATAGGATCAGTTTTCAGGATGTGTATTTGGTTTATGAGC
TCATGGACACGGACTTGCATCAGATTATCAAATCTT
back to top