FC931039

Overview
NameFC931039
Unique NameFC931039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK13_PANTR (Mitogen-activated protein kinase 13 OS=Pan troglodytes GN=MAPK13 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = 1
Query:  388 MRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQII 729
            +R +G +   + +   E+   YV    +G GAYG VCS+I++ + EKVAIKK++  F++ I A R  REL+LL+H++H+NVI L DV  P   + +F D YLV   M TDL +I+
Sbjct:    4 IRKKGFYKQDVNKXXXELXKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFHDFYLVMXFMQTDLQKIM 118          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 47/104 (45.19%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  424 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FQDVYLVYELMDTDLHQIIK 732
            +T++E+  +Y  +K +G GAYG VC +++R T  KVAIKK++  F++ + A R  REL LL+H+KHDNVI L DV      +  F D YLV   M TDL +++K
Sbjct:   16 KTIWEVPDRYKDLKQVGTGAYGTVCYALDRRTGAKVAIKKLHRPFQSDLFAKRAYRELRLLKHMKHDNVIGLVDVFTADLSLDRFHDFYLVMPFMGTDLGKLMK 119          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: HOG2_ZYGRO (Mitogen-activated protein kinase HOG2 OS=Zygosaccharomyces rouxii GN=HOG2 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 1
Query:  427 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            T+FEI  +Y  + P+G GA+G+VCS+ +    + VAIKKI   F   + A RT REL LL+H++H+N+I L+D+ +       +D+Y V EL  TDLH+++++
Sbjct:   15 TVFEITNRYTDLNPVGMGAFGLVCSATDTLVGQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLQDIFLS----PLEDIYFVTELQGTDLHRLLQT 113          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRO (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii GN=HOG1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 1
Query:  427 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            T+FEI  +Y  + P+G GA+G+VCS+ +    + VAIKKI   F   + A RT REL LL+H++H+N+I L+D+ +       +D+Y V EL  TDLH+++++
Sbjct:   15 TVFEITNRYTDLNPVGMGAFGLVCSATDTLAGQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLQDIFLS----PLEDIYFVTELQGTDLHRLLQT 113          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRC (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=HOG1 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 1
Query:  427 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            T+FEI  +Y  + P+G GA+G+VCS+ +    + VAIKKI   F   + A RT REL LL+H++H+N+I L+D+ +       +D+Y V EL  TDLH+++++
Sbjct:   15 TVFEITNRYTDLNPVGMGAFGLVCSATDTLAGQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLQDIFLS----PLEDIYFVTELQGTDLHRLLQT 113          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: HOG1_TORDE (Mitogen-activated protein kinase HOG1 OS=Torulaspora delbrueckii GN=HOG1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 1
Query:  427 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            T+FEI  +Y  + P+G GA+G+VCS+ +    + VAIKKI   F   + A RT REL LL+H++H+N+I L+D+ +       +D+Y V EL  TDLH+++++
Sbjct:   15 TVFEITNRYTDLNPVGMGAFGLVCSATDTLAQQPVAIKKIMKPFSTAVLAKRTYRELKLLKHLRHENLICLQDIFLS----PLEDIYFVTELQGTDLHRLLQT 113          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: HOG1_COCMI (Mitogen-activated protein kinase HOG1 OS=Cochliobolus miyabeanus GN=HOG1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 43/103 (41.75%), Postives = 71/103 (68.93%), Query Frame = 1
Query:  427 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            T FEI ++Y  ++ +G GA+G+VCS+ ++ TN+ VA+KKI   F   + + RT REL LL+H++H+N+I+L D+ +       +D+Y V EL+ TDLH+++ S
Sbjct:   12 TTFEITSRYTDLQLVGMGAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFIS----PLEDIYFVTELLGTDLHRLLTS 110          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK12_HUMAN (Mitogen-activated protein kinase 12 OS=Homo sapiens GN=MAPK12 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18
Identity = 46/104 (44.23%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  424 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            +T +E+   Y  ++P+G GAYG VCS+++  T  KVAIKK+   F++ + A R  REL LL+H++H+NVI L DV  P   +  F D YLV   M TDL +++K
Sbjct:   18 KTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK 121          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK08_DANRE (Mitogen-activated protein kinase 8 OS=Danio rerio GN=mapk8 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.481e-18
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = 1
Query:  397 RGKHYYMM--WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            R K YY +    + F +  +Y  ++PIG GA G+VCS+ +   +  VAIKK++  F+N+  A R  RELVL++ + H N+I L +V  P   +  FQDVYLV ELMD +L Q+I+
Sbjct:    6 REKEYYSIDVGDSTFTVLKRYQNLRPIGSGAQGIVCSAYDHVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: FUS3_YEAST (Mitogen-activated protein kinase FUS3 OS=Saccharomyces cerevisiae GN=FUS3 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.938e-18
Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = 1
Query:  469 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            +G GAYGVVCS+ ++ T E VAIKKI   F+  + ALRTLRE+ +L+H KH+N+I + ++  P    +F +VY++ ELM TDLH++I +
Sbjct:   19 LGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST 106          
The following BLAST results are available for this feature:
BLAST of FC931039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
MK13_PANTR1.563e-1842.61Mitogen-activated protein kinase 13 OS=Pan troglod... [more]
MK12_DANRE1.563e-1845.19Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
HOG2_ZYGRO2.041e-1841.75Mitogen-activated protein kinase HOG2 OS=Zygosacch... [more]
HOG1_ZYGRO2.041e-1841.75Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_ZYGRC2.041e-1841.75Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_TORDE2.041e-1841.75Mitogen-activated protein kinase HOG1 OS=Torulaspo... [more]
HOG1_COCMI2.041e-1841.75Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
MK12_HUMAN2.665e-1844.23Mitogen-activated protein kinase 12 OS=Homo sapien... [more]
MK08_DANRE3.481e-1842.61Mitogen-activated protein kinase 8 OS=Danio rerio ... [more]
FUS3_YEAST5.938e-1848.31Mitogen-activated protein kinase FUS3 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionC34100G05EF PostHarvP1 Citrus clementina cDNA clone C34100G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931039 ID=FC931039; Name=FC931039; organism=Citrus clementina; type=EST; length=736bp
GATAAATTATTCGCCCTCTCTCTCAGGCTCAGGCTCAGGCTCGGCTCTGA
ATCCGATCGCGACGAGATAAGGAATCTCACAGATCGGATAAACCATTTAG
ATCCCATCGGATCAGACATTCAGAATATAGATGCAATGTAATTTGTATTT
AAGCGACGAACTCGCTGCTCCCCTTTGAATTCCGAATTTTTGTTTTTGAC
GAATCAGCGAAGAAGCTTCTTATATTGCATTCCATTGAGCTGCTTTGGGG
ATGGTTAATTGGCTGAAAAGTGCAAAAGTTTACTACTTGGAAAAGTAGGT
GAGAAGAGAATCAGCGATCGCGAAACATCAAAGCAAACAAGTCGTAGCGG
CAAGGAGATGGCCACTCTGGTTGAACCTCCAAATGGGATGAGGTCAAGAG
GGAAGCATTATTACATGATGTGGCAAACATTGTTTGAAATTGATACAAAG
TACGTTCCAATCAAACCAATTGGTCGGGGAGCATACGGGGTTGTCTGTTC
TTCCATCAATAGGGAGACGAACGAGAAAGTTGCGATCAAGAAGATCAATA
ATGTGTTTGAGAATCGAATCGATGCATTGAGAACTTTGAGGGAGTTGGTG
CTGCTCAGACATATTAAGCATGACAATGTTATTGCTTTGAAGGATGTTAT
GATGCCTACTCATAGGATCAGTTTTCAGGATGTGTATTTGGTTTATGAGC
TCATGGACACGGACTTGCATCAGATTATCAAATCTT
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