FC931039

Overview
NameFC931039
Unique NameFC931039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.755e-18
Identity = 48/115 (41.74%), Postives = 71/115 (61.74%), Query Frame = 1
Query:  397 RGKHYYMM--WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            R K +Y +    + F +  +Y  ++PIG GA G+VCS+ +      VAIKK++  F+N+  A R  RELVL++ + H N+I L +V  P   +  FQDVYLV ELMD +L Q+I+
Sbjct:    6 REKEFYSVDVGDSTFTVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 120          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: NLK_MOUSE (Serine/threonine protein kinase NLK OS=Mus musculus GN=Nlk PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 1
Query:  457 PIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            P +PIG GA+GVV S  +    ++VA+KK+ NVF+N +   R  REL +L   KHDNV++  D++ P H   F+++Y+V ELM +DLH+II S
Sbjct:  140 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVS 232          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: NLK_HUMAN (Serine/threonine protein kinase NLK OS=Homo sapiens GN=NLK PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 1
Query:  457 PIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            P +PIG GA+GVV S  +    ++VA+KK+ NVF+N +   R  REL +L   KHDNV++  D++ P H   F+++Y+V ELM +DLH+II S
Sbjct:  140 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVS 232          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 47/115 (40.87%), Postives = 71/115 (61.74%), Query Frame = 1
Query:  397 RGKHYYMM--WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            R K +Y +    + F +  +Y  ++PIG GA G+VCS+ +      VAIKK++  F+N+  A R  RELVL++++ H N+I L +V      +  FQDVYLV ELMD +L Q+I+
Sbjct:    6 REKEFYSVDVGDSTFTVLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVIQ 120          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: JNK_SUBDO (Stress-activated protein kinase JNK OS=Suberites domuncula GN=JNK PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 1
Query:  388 MRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQII 729
            M S   +   +  T+F +  +Y  +  IG GA GVVCS+ +  T EK+AIKK+   F+N   A R  REL L++ + H N+I LK++  P   +  FQDVY+V ELMD +L ++I
Sbjct:    1 MSSSDYYSQRVGDTVFTVQKRYTNLTNIGSGAQGVVCSAFDTVTQEKIAIKKLVKPFQNETYAKRAFRELRLMKMVDHKNIIGLKNLFTPAKSLDDFQDVYIVMELMDANLCRVI 115          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17
Identity = 46/112 (41.07%), Postives = 71/112 (63.39%), Query Frame = 1
Query:  403 KHYYM-MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            +HY + +  T F I ++Y+ ++PIG GA G+VC++ +  T + VAIKK++  F+N   A R  RE  L++ + H N+I L +   P   +  FQDVYLV ELMD +L Q+I+
Sbjct:    7 QHYTVEVGDTNFTIHSRYINLRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQRNLEEFQDVYLVMELMDANLCQVIQ 118          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            F +  +Y  +KPIG GA G+VC++ +   +  VAIKK++  F+N+  A R  RELVL++ + H N+I+L +V  P   +  FQDVYLV ELMD +L Q+I+
Sbjct:   58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK10_MOUSE (Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            F +  +Y  +KPIG GA G+VC++ +   +  VAIKK++  F+N+  A R  RELVL++ + H N+I+L +V  P   +  FQDVYLV ELMD +L Q+I+
Sbjct:   58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            F +  +Y  +KPIG GA G+VC++ +   +  VAIKK++  F+N+  A R  RELVL++ + H N+I+L +V  P   +  FQDVYLV ELMD +L Q+I+
Sbjct:   58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK09_RAT (Mitogen-activated protein kinase 9 OS=Rattus norvegicus GN=Mapk9 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.256e-17
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = 1
Query:  391 RSRGKHYYM-MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQII 729
            +S G+ Y + +  + F +  +Y  +KPIG GA G+VC++ +      VA+KK++  F+N+  A R  RELVLL+ + H N+I+L +V  P   +  FQDVYLV ELMD +L Q+I
Sbjct:    5 KSDGQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI 119          
The following BLAST results are available for this feature:
BLAST of FC931039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
MK08B_CYPCA7.755e-1841.74Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
NLK_MOUSE1.323e-1746.24Serine/threonine protein kinase NLK OS=Mus musculu... [more]
NLK_HUMAN1.323e-1746.24Serine/threonine protein kinase NLK OS=Homo sapien... [more]
MK08A_CYPCA1.728e-1740.87Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
JNK_SUBDO1.728e-1740.87Stress-activated protein kinase JNK OS=Suberites d... [more]
JNK_DROME1.728e-1741.07Stress-activated protein kinase JNK OS=Drosophila ... [more]
MK10_RAT2.256e-1744.55Mitogen-activated protein kinase 10 OS=Rattus norv... [more]
MK10_MOUSE2.256e-1744.55Mitogen-activated protein kinase 10 OS=Mus musculu... [more]
MK10_HUMAN2.256e-1744.55Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
MK09_RAT2.256e-1741.74Mitogen-activated protein kinase 9 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionC34100G05EF PostHarvP1 Citrus clementina cDNA clone C34100G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931039 ID=FC931039; Name=FC931039; organism=Citrus clementina; type=EST; length=736bp
GATAAATTATTCGCCCTCTCTCTCAGGCTCAGGCTCAGGCTCGGCTCTGA
ATCCGATCGCGACGAGATAAGGAATCTCACAGATCGGATAAACCATTTAG
ATCCCATCGGATCAGACATTCAGAATATAGATGCAATGTAATTTGTATTT
AAGCGACGAACTCGCTGCTCCCCTTTGAATTCCGAATTTTTGTTTTTGAC
GAATCAGCGAAGAAGCTTCTTATATTGCATTCCATTGAGCTGCTTTGGGG
ATGGTTAATTGGCTGAAAAGTGCAAAAGTTTACTACTTGGAAAAGTAGGT
GAGAAGAGAATCAGCGATCGCGAAACATCAAAGCAAACAAGTCGTAGCGG
CAAGGAGATGGCCACTCTGGTTGAACCTCCAAATGGGATGAGGTCAAGAG
GGAAGCATTATTACATGATGTGGCAAACATTGTTTGAAATTGATACAAAG
TACGTTCCAATCAAACCAATTGGTCGGGGAGCATACGGGGTTGTCTGTTC
TTCCATCAATAGGGAGACGAACGAGAAAGTTGCGATCAAGAAGATCAATA
ATGTGTTTGAGAATCGAATCGATGCATTGAGAACTTTGAGGGAGTTGGTG
CTGCTCAGACATATTAAGCATGACAATGTTATTGCTTTGAAGGATGTTAT
GATGCCTACTCATAGGATCAGTTTTCAGGATGTGTATTTGGTTTATGAGC
TCATGGACACGGACTTGCATCAGATTATCAAATCTT
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