FC931039

Overview
NameFC931039
Unique NameFC931039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: HOG1_SETTU (Mitogen-activated protein kinase HOG1 OS=Setosphaeria turcica GN=HOG1 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.335e-14
Identity = 37/86 (43.02%), Postives = 60/86 (69.77%), Query Frame = 1
Query:  478 GAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            GA+G+VCS+ ++ TN+ VA+KKI   F   + + RT REL LL+H++H+N+I+L D+ +       +D+Y V EL+ TDLH+++ S
Sbjct:    2 GAFGLVCSAKDQLTNQAVAVKKIMKPFSTPVLSKRTYRELKLLKHLRHENIISLSDIFIS----PLEDIYFVTELLGTDLHRLLTS 83          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: JNK1_CAEEL (Stress-activated protein kinase jnk-1 OS=Caenorhabditis elegans GN=jnk-1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.983e-14
Identity = 44/130 (33.85%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  346 SGKEMATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIK 732
            SG     L+EP +       +   + +    +  +Y  ++ IG GA G+VCS+ +   NE+VAIKK++  F+N   A R  REL L+  + H N+I + +   P  ++  F D+Y+V ELMD +L Q+I+
Sbjct:   84 SGTGGGILMEPSSIHVPENYYSVTIGEAQMVVLKRYQNLRLIGSGAQGIVCSAFDTVRNEQVAIKKLSRPFQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVIQ 213          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: KKQ1_YEAST (Probable serine/threonine-protein kinase YKL161C OS=Saccharomyces cerevisiae GN=YKL161C PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 46/95 (48.42%), Postives = 63/95 (66.32%), Query Frame = 1
Query:  469 IGRGAYGVVCSSINRETNEK--VAIKKINNVFENRIDALRTLRELVLLRHIK-HDNVIALKD---VMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            IGRG++ ++CSS   E+NE+  VAI+KI N F N++   RTLREL LLRH++ H N++ L D   V  P   ++   VYL  ELM+ DL QII+S
Sbjct:   29 IGRGSHSLICSSTYTESNEETHVAIRKIPNAFGNKLSCKRTLRELKLLRHLRGHPNIVWLFDTDIVFYPNGALN--GVYLYEELMECDLSQIIRS 121          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: SPM1_SCHPO (Mitogen-activated protein kinase spm1 OS=Schizosaccharomyces pombe GN=spm1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13
Identity = 44/116 (37.93%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  397 RGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSIN--RETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-HDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            R    Y ++     ++  +  +K +G+GAYG+VC++ N   +  E VAIKKI NVF   I   R LRE+ LL H + H N+  + D+ +  +  +F +VY+  ELM+ DL+ IIKS
Sbjct:    3 RRHRVYRVFNQEMYVEPNFKVVKELGQGAYGIVCAARNVASKDQEAVAIKKITNVFSKSILTKRALREIKLLIHFRNHRNITCIYDLDI-INPYNFNEVYIYEELMEADLNAIIKS 117          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: YPC2_CAEEL (Putative serine/threonine-protein kinase C05D10.2 OS=Caenorhabditis elegans GN=C05D10.2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13
Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  439 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI-KHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIK 732
            I  K+   K +G+GAYG+V  + ++ + E VA+KKI + F N  D+ RT RE++ L+   KH NVI L ++    +    +D+YL +E M+ DLH +IK
Sbjct:    9 IHEKFDLQKRLGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFREVMFLQEFGKHPNVIKLYNIFRADND---RDIYLAFEFMEADLHNVIK 104          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MKC1_CANAL (Mitogen-activated protein kinase MKC1 OS=Candida albicans GN=MKC1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 1
Query:  400 GKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKV-----------------AIKKINNVFENRIDALRTLRELVLLRHIK-HDNVIALKDVMMPTHRIS--FQDVYLVYELMDTDLHQIIKS 735
            G+    ++   F ID+++  +K +G GAYG+VCS+     ++KV                 AIKKI N+F   I   R LREL LL+  + H N+  L D+ +  + ++  F ++YL  ELM+ D+HQII+S
Sbjct:   11 GRSVNKVYNQEFIIDSRFKIVKELGHGAYGIVCSAKYDNGSKKVPDSNNGNASSSANASFVAIKKITNIFSKNILCKRALRELKLLQFFRGHKNITCLYDLDIIPNPMTGEFNEIYLYEELMECDMHQIIRS 142          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK14C_DROME (Putative mitogen-activated protein kinase 14C OS=Drosophila melanogaster GN=p38c PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12
Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  424 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPT--HRISFQDVYLVYELMDTDLHQIIKS 735
            ++L+E    Y  ++ +G G++G V     R T    A+K++   FE   DA  T RE+ LL+H+ H NVI+L +V  P   + + FQ VYLV  LMD DLH+  +S
Sbjct:   11 ESLWEFPDIYEFVRFLGGGSFGQVAKVRLRGTENYFAMKRLMRPFEREEDAKGTYREIRLLKHMNHRNVISLLNVFHPPAHNMMEFQQVYLVTHLMDADLHRYSRS 116          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: NLK_CAEBR (Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.030e-11
Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query:  457 PIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQD 681
            P +PIG GA+GVV S  +  + ++VA+KK+ NVF+N     R  RE+ +L   +HDNV++L D++ P +   FQ+
Sbjct:  210 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQE 284          
The following BLAST results are available for this feature:
BLAST of FC931039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
HOG1_SETTU2.335e-1443.02Mitogen-activated protein kinase HOG1 OS=Setosphae... [more]
JNK1_CAEEL3.983e-1433.85Stress-activated protein kinase jnk-1 OS=Caenorhab... [more]
KKQ1_YEAST3.372e-1348.42Probable serine/threonine-protein kinase YKL161C O... [more]
SPM1_SCHPO4.404e-1337.93Mitogen-activated protein kinase spm1 OS=Schizosac... [more]
YPC2_CAEEL9.810e-1339.39Putative serine/threonine-protein kinase C05D10.2 ... [more]
MKC1_CANAL1.673e-1234.85Mitogen-activated protein kinase MKC1 OS=Candida a... [more]
MK14C_DROME8.305e-1238.68Putative mitogen-activated protein kinase 14C OS=D... [more]
NLK_CAEBR7.030e-1141.33Serine/threonine kinase NLK OS=Caenorhabditis brig... [more]

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Properties
Property NameValue
Genbank descriptionC34100G05EF PostHarvP1 Citrus clementina cDNA clone C34100G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931039 ID=FC931039; Name=FC931039; organism=Citrus clementina; type=EST; length=736bp
GATAAATTATTCGCCCTCTCTCTCAGGCTCAGGCTCAGGCTCGGCTCTGA
ATCCGATCGCGACGAGATAAGGAATCTCACAGATCGGATAAACCATTTAG
ATCCCATCGGATCAGACATTCAGAATATAGATGCAATGTAATTTGTATTT
AAGCGACGAACTCGCTGCTCCCCTTTGAATTCCGAATTTTTGTTTTTGAC
GAATCAGCGAAGAAGCTTCTTATATTGCATTCCATTGAGCTGCTTTGGGG
ATGGTTAATTGGCTGAAAAGTGCAAAAGTTTACTACTTGGAAAAGTAGGT
GAGAAGAGAATCAGCGATCGCGAAACATCAAAGCAAACAAGTCGTAGCGG
CAAGGAGATGGCCACTCTGGTTGAACCTCCAAATGGGATGAGGTCAAGAG
GGAAGCATTATTACATGATGTGGCAAACATTGTTTGAAATTGATACAAAG
TACGTTCCAATCAAACCAATTGGTCGGGGAGCATACGGGGTTGTCTGTTC
TTCCATCAATAGGGAGACGAACGAGAAAGTTGCGATCAAGAAGATCAATA
ATGTGTTTGAGAATCGAATCGATGCATTGAGAACTTTGAGGGAGTTGGTG
CTGCTCAGACATATTAAGCATGACAATGTTATTGCTTTGAAGGATGTTAT
GATGCCTACTCATAGGATCAGTTTTCAGGATGTGTATTTGGTTTATGAGC
TCATGGACACGGACTTGCATCAGATTATCAAATCTT
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