FC931039

Overview
NameFC931039
Unique NameFC931039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9494 contig Ccv1_Contig9494:296..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK12_ORYSJ (Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22
Identity = 46/89 (51.69%), Postives = 72/89 (80.90%), Query Frame = 1
Query:  469 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            IG+G+YGVV ++++  T E+VAIKKIN+VFE+  DA R LRE+ LLR ++H +++ +K +M+P  R  FQD+Y+V+ELM++DLHQ+I++
Sbjct:   93 IGKGSYGVVAAAVDTRTGERVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFQDIYVVFELMESDLHQVIRA 181          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK17_ORYSJ (Mitogen-activated protein kinase 17 OS=Oryza sativa subsp. japonica GN=MPK17 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22
Identity = 45/96 (46.88%), Postives = 76/96 (79.17%), Query Frame = 1
Query:  448 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            +Y   + IG+G+YGVV ++++ +T E+VAIKKIN+VF++  DA R LRE+ LLR ++H +++ +K +M+P  R  F+D+Y+++ELM++DLHQ+IK+
Sbjct:  104 RYKVSEVIGKGSYGVVAAAVDTQTGERVAIKKINDVFDHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVIFELMESDLHQVIKA 199          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK07_RAT (Mitogen-activated protein kinase 7 OS=Rattus norvegicus GN=Mapk7 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIKS 735
            F++  +Y  I+ IG GAYGVV S+  R T ++VAIKKI N F+   +A RTLREL +L+H KHDN+IA+KD++ PT     F+ VY+V +LM++DLHQII S
Sbjct:   49 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFRSVYVVLDLMESDLHQIIHS 150          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK07_MOUSE (Mitogen-activated protein kinase 7 OS=Mus musculus GN=Mapk7 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIKS 735
            F++  +Y  I+ IG GAYGVV S+  R T ++VAIKKI N F+   +A RTLREL +L+H KHDN+IA+KD++ PT     F+ VY+V +LM++DLHQII S
Sbjct:   49 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILKPTVPYGEFRSVYVVLDLMESDLHQIIHS 150          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK07_HUMAN (Mitogen-activated protein kinase 7 OS=Homo sapiens GN=MAPK7 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIKS 735
            F++  +Y  I+ IG GAYGVV S+  R T ++VAIKKI N F+   +A RTLREL +L+H KHDN+IA+KD++ PT     F+ VY+V +LM++DLHQII S
Sbjct:   49 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS 150          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MK07_BOVIN (Mitogen-activated protein kinase 7 OS=Bos taurus GN=MAPK7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22
Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 1
Query:  433 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFQDVYLVYELMDTDLHQIIKS 735
            F++  +Y  I+ IG GAYGVV S+  R T ++VAIKKI N F+   +A RTLREL +L+H KHDN+IA+KD++ PT     F+ VY+V +LM++DLHQII S
Sbjct:   49 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS 150          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22
Identity = 44/97 (45.36%), Postives = 75/97 (77.32%), Query Frame = 1
Query:  445 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            ++Y   + +G+G+YGVV ++++  T  +VAIKKIN+VFE+  DA R LRE+ LLR ++H +++ +K +M+P  R  F+D+Y+++ELM++DLHQ+IK+
Sbjct:   20 SRYEVTEVVGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYIIFELMESDLHQVIKA 116          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK15_ARATH (Mitogen-activated protein kinase 15 OS=Arabidopsis thaliana GN=MPK15 PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 48/89 (53.93%), Postives = 71/89 (79.78%), Query Frame = 1
Query:  469 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            +G+G+YGVV S+I+  T E+VAIKKIN+VF++  DA R LRE+ LLR + H +V+ +K +M+P  R  F+DVY+V+ELM++DLHQ+IK+
Sbjct:   96 VGKGSYGVVGSAIDTHTGERVAIKKINDVFDHISDATRILREIKLLRLLLHPDVVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKA 184          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSJ (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. japonica GN=MPK13 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 43/89 (48.31%), Postives = 73/89 (82.02%), Query Frame = 1
Query:  469 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            +G+G+YGVV ++++  T E+VAIKKIN+VFE+  DA+R LRE+ +LR ++H +++ +K +M+P  R  F+D+Y+V+ELM++DLHQ+I++
Sbjct:   19 VGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEA 107          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK13_ORYSI (Mitogen-activated protein kinase 13 OS=Oryza sativa subsp. indica GN=MPK13 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 43/89 (48.31%), Postives = 73/89 (82.02%), Query Frame = 1
Query:  469 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            +G+G+YGVV ++++  T E+VAIKKIN+VFE+  DA+R LRE+ +LR ++H +++ +K +M+P  R  F+D+Y+V+ELM++DLHQ+I++
Sbjct:   19 VGKGSYGVVAAAVDTHTGERVAIKKINDVFEHVSDAIRILREIKVLRLLRHPDIVVIKHIMLPPTRREFRDIYVVFELMESDLHQVIEA 107          
The following BLAST results are available for this feature:
BLAST of FC931039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
MPK12_ORYSJ2.330e-2251.69Mitogen-activated protein kinase 12 OS=Oryza sativ... [more]
MPK17_ORYSJ3.043e-2246.88Mitogen-activated protein kinase 17 OS=Oryza sativ... [more]
MK07_RAT3.974e-2252.94Mitogen-activated protein kinase 7 OS=Rattus norve... [more]
MK07_MOUSE3.974e-2252.94Mitogen-activated protein kinase 7 OS=Mus musculus... [more]
MK07_HUMAN3.974e-2252.94Mitogen-activated protein kinase 7 OS=Homo sapiens... [more]
MK07_BOVIN3.974e-2252.94Mitogen-activated protein kinase 7 OS=Bos taurus G... [more]
MPK16_ORYSJ8.852e-2245.36Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
MPK15_ARATH1.156e-2153.93Mitogen-activated protein kinase 15 OS=Arabidopsis... [more]
MPK13_ORYSJ1.156e-2148.31Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]
MPK13_ORYSI1.156e-2148.31Mitogen-activated protein kinase 13 OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionC34100G05EF PostHarvP1 Citrus clementina cDNA clone C34100G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931039 ID=FC931039; Name=FC931039; organism=Citrus clementina; type=EST; length=736bp
GATAAATTATTCGCCCTCTCTCTCAGGCTCAGGCTCAGGCTCGGCTCTGA
ATCCGATCGCGACGAGATAAGGAATCTCACAGATCGGATAAACCATTTAG
ATCCCATCGGATCAGACATTCAGAATATAGATGCAATGTAATTTGTATTT
AAGCGACGAACTCGCTGCTCCCCTTTGAATTCCGAATTTTTGTTTTTGAC
GAATCAGCGAAGAAGCTTCTTATATTGCATTCCATTGAGCTGCTTTGGGG
ATGGTTAATTGGCTGAAAAGTGCAAAAGTTTACTACTTGGAAAAGTAGGT
GAGAAGAGAATCAGCGATCGCGAAACATCAAAGCAAACAAGTCGTAGCGG
CAAGGAGATGGCCACTCTGGTTGAACCTCCAAATGGGATGAGGTCAAGAG
GGAAGCATTATTACATGATGTGGCAAACATTGTTTGAAATTGATACAAAG
TACGTTCCAATCAAACCAATTGGTCGGGGAGCATACGGGGTTGTCTGTTC
TTCCATCAATAGGGAGACGAACGAGAAAGTTGCGATCAAGAAGATCAATA
ATGTGTTTGAGAATCGAATCGATGCATTGAGAACTTTGAGGGAGTTGGTG
CTGCTCAGACATATTAAGCATGACAATGTTATTGCTTTGAAGGATGTTAT
GATGCCTACTCATAGGATCAGTTTTCAGGATGTGTATTTGGTTTATGAGC
TCATGGACACGGACTTGCATCAGATTATCAAATCTT
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