FC931045

Overview
NameFC931045
Unique NameFC931045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15171 contig Ccv1_Contig15171:323..1047. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_NEIMB (Cysteine synthase OS=Neisseria meningitidis serogroup B GN=cysK PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.572e-52
Identity = 107/227 (47.14%), Postives = 145/227 (63.88%), Query Frame = 3
Query:   45 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNA-FMLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            I   +++LIG TPLV LN+++EG  A +AVK E F P +S+KDR A AM+E AE    I+   T I+E TSGN G+ +A + A +GYK+ +TMP   S ER++ +RAFGA+LILT  A+GM G + KA+ L+++ P+  FM +QF N AN  VH +TT  EIW DT G+VD+FV             + LK   P VK+  VEP  S +L+GG+ GPH I G G GF
Sbjct:    3 IANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVKDRIAEAMIEGAEKAGKINKN-TVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKERKMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTAEEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGPHPIQGIGAGF 228          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_BACSU (Cysteine synthase OS=Bacillus subtilis GN=cysK PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.405e-48
Identity = 104/227 (45.81%), Postives = 145/227 (63.88%), Query Frame = 3
Query:   45 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWED-TMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +   +++LIG TP+V LN++++   A + +K E   P +S+KDR  +AM+E AE +  +  G T IIEPTSGN GI +A +AA KG K +L MP   S+ERR  +RA+GA+L+LT  A+GM G +KKA+EL E     F+ QQF+NP+N  +H +TTG EI E     Q+D FV             + LK   P++KIY VEP++S +L+GGKPGPH I G G GF
Sbjct:    4 VANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNT-IIEPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEELAEK-HGYFVPQQFNNPSNPEIHRQTTGKEIVEQFGDDQLDAFVAGIGTGGTITGAGEVLKEAYPSIKIYAVEPSDSPVLSGGKPGPHKIQGIGAGF 228          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 104/237 (43.88%), Postives = 144/237 (60.76%), Query Frame = 3
Query:   39 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF-MLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKI--YGVEPAESNILNGG------KPGPHLITGNGVGF 722
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  + +LQQFSNPAN  +H +TTGPEIWEDT GQVD+F+             +Y+K       +    VEP +S ++         KPGPH I G G GF
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGF 234          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 104/237 (43.88%), Postives = 144/237 (60.76%), Query Frame = 3
Query:   39 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF-MLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKI--YGVEPAESNILNGG------KPGPHLITGNGVGF 722
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  + +LQQFSNPAN  +H +TTGPEIWEDT GQVD+F+             +Y+K       +    VEP +S ++         KPGPH I G G GF
Sbjct:    2 SKIYEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGF 234          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 104/237 (43.88%), Postives = 144/237 (60.76%), Query Frame = 3
Query:   39 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF-MLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKI--YGVEPAESNILNGG------KPGPHLITGNGVGF 722
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  + +LQQFSNPAN  +H +TTGPEIWEDT GQVD+F+             +Y+K       +    VEP +S ++         KPGPH I G G GF
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGF 234          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.553e-47
Identity = 104/237 (43.88%), Postives = 144/237 (60.76%), Query Frame = 3
Query:   39 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF-MLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKI--YGVEPAESNILNGG------KPGPHLITGNGVGF 722
            + I  D S  IG TPLV LN++  G    I  K E   P+ S+K R    M+ DAE + ++ PG   ++EPTSGN GI++A++AA +GYK+ LTMP   S+ERR  ++A GA+L+LT+ AKGM G ++KA+E++ S P  + +LQQFSNPAN  +H +TTGPEIWEDT GQVD+F+             +Y+K       +    VEP +S ++         KPGPH I G G GF
Sbjct:    2 SKIFEDNSLTIGHTPLVRLNRIGNG---RILAKVESRNPSFSVKCRIGANMIWDAEKRGVLKPG-VELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGF 234          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.029e-47
Identity = 106/223 (47.53%), Postives = 138/223 (61.88%), Query Frame = 3
Query:   57 VSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMG-QVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            V+Q+IG TP+V L  V +   A I VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  +H  TTGPE+ E   G Q+D F+             + LK + PNV+I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEIHELTTGPELVEQFEGRQIDAFLAGVGTGGTLSGVGKVLKKEYPNVEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.029e-47
Identity = 106/223 (47.53%), Postives = 138/223 (61.88%), Query Frame = 3
Query:   57 VSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMG-QVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            V+Q+IG TP+V L  V +   A I VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  +H  TTGPE+ E   G Q+D F+             + LK + PNV+I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    9 VTQIIGNTPVVKLRNVVDDDAADIYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEIHELTTGPELVEQFEGRQIDAFLAGVGTGGTLSGVGKVLKKEYPNVEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.460e-47
Identity = 105/231 (45.45%), Postives = 142/231 (61.47%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF-MLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLK-SQNPNVKIYGVEPAESNILNGG------KPGPHLITGNGVGF 722
            D SQ IG+TPLV LN++ +G  A +  K E   P  S+K R   AM+ DAE + L+ PGK  +IEPTSGN GI++AF+AA +G  + LTMP   SLERR  + A+GA L+LT+  KGM G V++A+++  S P+ + +LQQF NPAN  +H +TTGPEIWEDT G +DI V             +Y+K +Q   +    VEP  S +++        KPGPH I G G GF
Sbjct:   10 DNSQTIGKTPLVRLNRIVKGAPATVLAKIEGRNPAYSVKCRIGAAMIWDAEQRGLLGPGKE-LIEPTSGNTGIALAFVAAARGIPLTLTMPETMSLERRKLLAAYGAKLVLTEGVKGMTGAVRRAEDIAASDPDRYVLLQQFRNPANPAIHEQTTGPEIWEDTGGAIDILVSGVGTGGTITGVSRYIKQTQGKPILSVAVEPEASPVISQQRSGLPLKPGPHKIQGIGAGF 239          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_FLAS3 (Cysteine synthase OS=Flavobacterium sp. (strain K3-15 / DSM ID92-509) GN=cysK PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.902e-47
Identity = 100/220 (45.45%), Postives = 137/220 (62.27%), Query Frame = 3
Query:   63 QLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            + IG TP+V +N +       I +K E   P  SIKDR A+AM+EDAE K L++   +TIIEPTSGN GI +A +AA+KGYK++L MP   S+ERR  M A+GA+ +LT   KGM G ++KA EL E TPN+++ +QF NPAN ++H ETT  EI +D    +D  +             + LK + PN+K+  VEP  S +L+GG P PH + G G GF
Sbjct:    8 ETIGNTPVVKINNLFNS-DHEIWIKLEKSNPGGSIKDRIALAMIEDAEAKGLLNKD-STIIEPTSGNTGIGLALVAAVKGYKLILVMPESMSIERRKIMEAYGAEFVLTPREKGMKGAIEKANELAEETPNSWIPRQFDNPANVKIHVETTAQEILQDFPEGLDYVITGVGTGGHITGIAKALKEKYPNLKVIAVEPELSPVLSGGSPAPHPLQGLGAGF 225          
The following BLAST results are available for this feature:
BLAST of FC931045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_NEIMB3.572e-5247.14Cysteine synthase OS=Neisseria meningitidis serogr... [more]
CYSK_BACSU1.405e-4845.81Cysteine synthase OS=Bacillus subtilis GN=cysK PE=... [more]
CYSK_SALTY1.553e-4743.88Cysteine synthase A OS=Salmonella typhimurium GN=c... [more]
CYSK_SALTI1.553e-4743.88Cysteine synthase A OS=Salmonella typhi GN=cysK PE... [more]
CYSK_ECOLI1.553e-4743.88Cysteine synthase A OS=Escherichia coli (strain K1... [more]
CYSK_ECO571.553e-4743.88Cysteine synthase A OS=Escherichia coli O157:H7 GN... [more]
CYSK_STAES2.029e-4747.53Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
CYSK_STAEQ2.029e-4747.53Cysteine synthase OS=Staphylococcus epidermidis (s... [more]
SRPG_SYNE73.460e-4745.45Cysteine synthase, plasmid OS=Synechococcus elonga... [more]
CYSK_FLAS35.902e-4745.45Cysteine synthase OS=Flavobacterium sp. (strain K3... [more]

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Properties
Property NameValue
Genbank descriptionC34100G11EF PostHarvP1 Citrus clementina cDNA clone C34100G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931045 ID=FC931045; Name=FC931045; organism=Citrus clementina; type=EST; length=725bp
CTCAGAGACTCAGAGATTTGCCCAAGGATCTTCCAGCTACCAACATCAAG
AGAGATGTTTCCCAGCTCATTGGAAGAACCCCGCTTGTGTTTCTTAACAA
AGTCAGTGAAGGATGTGGAGCTTATATTGCTGTCAAGCAAGAAATGTTCC
AACCCACTGCTAGCATCAAGGACAGACCAGCAGTGGCCATGCTCGAAGAT
GCAGAAAATAAAAACTTAATTTCTCCCGGAAAGACCACTATCATAGAGCC
CACGTCAGGGAACATGGGAATAAGCATGGCGTTTATGGCAGCAATGAAAG
GGTATAAGATGGTTCTAACTATGCCCTCTTATACAAGCTTGGAGAGGAGA
GTGACAATGAGAGCATTTGGAGCTGATTTAATCCTCACAGATCCAGCCAA
GGGGATGGGAGGAACTGTTAAGAAGGCTCAAGAACTTTTGGAATCCACAC
CAAATGCTTTCATGCTTCAACAATTTTCAAATCCTGCCAATACGCGGGTT
CATTTTGAGACAACTGGTCCTGAGATATGGGAGGATACGATGGGACAAGT
AGACATCTTTGTAATGGGAATCGGTAGTGGAGGAACAGTCTCTGGTGTCG
GGCAGTATCTTAAATCTCAAAATCCTAATGTTAAGATCTATGGAGTGGAA
CCAGCTGAAAGTAATATATTGAATGGGGGCAAACCAGGTCCTCATCTCAT
TACTGGCAATGGCGTTGGATTCAAA
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