FC931045

Overview
NameFC931045
Unique NameFC931045
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAAW (Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQ-VDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  VH  TTGPE+ +   G+ +D F+             + LK + PN++I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAAS (Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQ-VDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  VH  TTGPE+ +   G+ +D F+             + LK + PN++I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAAR (Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQ-VDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  VH  TTGPE+ +   G+ +D F+             + LK + PN++I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAAN (Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQ-VDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  VH  TTGPE+ +   G+ +D F+             + LK + PN++I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAAM (Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQ-VDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  VH  TTGPE+ +   G+ +D F+             + LK + PN++I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STAAC (Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.243e-46
Identity = 102/224 (45.54%), Postives = 139/224 (62.05%), Query Frame = 3
Query:   54 DVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMGQ-VDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            +++Q+IG TP+V L  V +   A + VK E   P  S+KDR A+AM+E AE +  I PG T I+EPTSGN GI +AF+ A KGYK V TMP   S ERR  ++A+GA+L+LT  ++ M G +KKA+EL E     F  QQF NPAN  VH  TTGPE+ +   G+ +D F+             + LK + PN++I  +EP  S +L+GG+PGPH + G G GF
Sbjct:    8 NITQIIGGTPVVKLRNVVDDNAADVYVKLEYQNPGGSVKDRIALAMIEKAEREGKIKPGDT-IVEPTSGNTGIGLAFVCAAKGYKAVFTMPETMSQERRNLLKAYGAELVLTPGSEAMKGAIKKAKELKEE-HGYFEPQQFENPANPEVHELTTGPELLQQFEGKTIDAFLAGVGTGGTLSGVGKVLKKEYPNIEIVAIEPEASPVLSGGEPGPHKLQGLGAGF 229          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_STRP6 (Cysteine synthase OS=Streptococcus pyogenes serotype M6 GN=cysK PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 2.321e-43
Identity = 99/229 (43.23%), Postives = 139/229 (60.70%), Query Frame = 3
Query:   39 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEIWEDTMG-QVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            T I + +++L+G+TP++ LN++     A + VK E F P +S+KDR A++M+E AE + LISPG   IIEPTSGN GI +A++ A KGY++++ MP   SLERR  ++A+GA+L+LT  A+GM G + K  E L     A+M  QF+NPAN  +H +TT  EI E      +D FV               LK  +P   IY VE  ES +L+G +PGPH I G   GF
Sbjct:    2 TKIYKTITELVGQTPIIKLNRLIPNEAADVYVKLEAFNPGSSVKDRIALSMIEAAEAEGLISPGDV-IIEPTSGNTGIGLAWVGAAKGYRVIIVMPETMSLERRQIIQAYGAELVLTPGAEGMKGAIAKT-ETLAIELGAWMPMQFNNPANPSIHEKTTAQEILEAFKEISLDAFVSGVGTGGTLSGVSHVLKKASPETVIYAVEAEESAVLSGQEPGPHKIQGISAGF 228          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSM_BACSU (Probable cysteine synthase OS=Bacillus subtilis GN=ytkP PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.663e-41
Identity = 94/229 (41.05%), Postives = 134/229 (58.52%), Query Frame = 3
Query:   45 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAFMLQQFSNPANTRVHFETTGPEI---WEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQNPNVKIYGVEPAESNILNGGKPGPHLITGNGVGF 722
            I  + + LIG TPLV LN++     A + +K E F P+ S+KDR A  M+ +AE   L+ PG + IIEPTSGN GI +A  AA +GYK +L MP   + ER   ++A+GA+++LT   + M G++KKA+EL E  PN+++  QF N AN   H +TT PEI    E+    +  FV             + LK   P++ ++ VEPA S +L+GGKPG H + G   GF
Sbjct:    4 IVANTADLIGDTPLVRLNRLQPENAAQVYLKLEFFNPSGSVKDRAAYQMIIEAEQNGLLKPG-SVIIEPTSGNTGIGLAMNAAARGYKAILVMPDTMTKERINLLKAYGAEVVLTPGEERMPGSIKKAKELAEQIPNSYIPMQFDNTANPDAHRKTTAPEIARAIEEIGKPLGAFVASSGTGGTITGTGEALKELFPDITVHVVEPAGSPVLSGGKPGAHKLVGTSPGF 231          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAI (Cysteine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysK PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.033e-39
Identity = 97/237 (40.93%), Postives = 136/237 (57.38%), Query Frame = 3
Query:   39 TNIKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNA-FMLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLK--SQNPNVKIYGVEPAESNILN---GGK---PGPHLITGNGVGF 722
            + I +D S  IG TPLV LN++  G    I VK E   P+ S+K R    M+  AE  N I+     +IE TSGN GI++A++AA + Y++ LTMP   S+ER+  +++ GA+LILTD   GM G + KA +++   P+  F+L+QF NPAN  +H  TTGPEIW DT G +DI +             +Y+K   +  N+    VEP+ES ++     GK   PGPH I G G GF
Sbjct:    2 SKIYQDNSLTIGNTPLVRLNRIGNG---NILVKIESRNPSFSVKCRIGANMIWHAEKNNNINKN-VKLIEATSGNTGIALAYVAASRNYRLTLTMPETMSIERKKILKSLGAELILTDGRYGMKGAISKANDIISRNPSKYFLLKQFENPANPEIHQITTGPEIWNDTNGNLDILISAVGTGGTITGITRYIKKIKRKKNLISIAVEPSESPVITQFLAGKAIEPGPHKIQGIGPGF 234          
BLAST of FC931045 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.726e-39
Identity = 97/234 (41.45%), Postives = 134/234 (57.26%), Query Frame = 3
Query:   45 IKRDVSQLIGRTPLVFLNKVSEGCGAYIAVKQEMFQPTASIKDRPAVAMLEDAENKNLISPGKTTIIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGADLILTDPAKGMGGTVKKAQELLESTPNAF-MLQQFSNPANTRVHFETTGPEIWEDTMGQVDIFVMXXXXXXXXXXXXQYLKSQ-NPNVKIYGVEPAESNILNGG------KPGPHLITGNGVGF 722
            I  D S  IG TPLV L     G    + VK E   P+ S+K R    M+  AE    ++ GK  I++ TSGN GI++A++AA +GYK+ LTMP   SLER+  +   G +L+LT+ AKGM G + KA+E++ S P+ + ML+QF NPAN ++H ETTGPEIW+DT G+VD+ V             + +K      +    VEP ES +++        KPGPH I G G GF
Sbjct:    3 IYADNSYSIGNTPLVRLKHF--GHNGNVVVKIEGRNPSYSVKCRIGANMVWQAEKDGTLTKGKE-IVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGF 233          
The following BLAST results are available for this feature:
BLAST of FC931045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
CYSK_STAAW2.243e-4645.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAS2.243e-4645.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAR2.243e-4645.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAN2.243e-4645.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAM2.243e-4645.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STAAC2.243e-4645.54Cysteine synthase OS=Staphylococcus aureus (strain... [more]
CYSK_STRP62.321e-4343.23Cysteine synthase OS=Streptococcus pyogenes seroty... [more]
CYSM_BACSU1.663e-4141.05Probable cysteine synthase OS=Bacillus subtilis GN... [more]
CYSK_BUCAI2.033e-3940.93Cysteine synthase OS=Buchnera aphidicola subsp. Ac... [more]
CYSK_HAEIN7.726e-3941.45Cysteine synthase OS=Haemophilus influenzae GN=cys... [more]

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Properties
Property NameValue
Genbank descriptionC34100G11EF PostHarvP1 Citrus clementina cDNA clone C34100G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931045 ID=FC931045; Name=FC931045; organism=Citrus clementina; type=EST; length=725bp
CTCAGAGACTCAGAGATTTGCCCAAGGATCTTCCAGCTACCAACATCAAG
AGAGATGTTTCCCAGCTCATTGGAAGAACCCCGCTTGTGTTTCTTAACAA
AGTCAGTGAAGGATGTGGAGCTTATATTGCTGTCAAGCAAGAAATGTTCC
AACCCACTGCTAGCATCAAGGACAGACCAGCAGTGGCCATGCTCGAAGAT
GCAGAAAATAAAAACTTAATTTCTCCCGGAAAGACCACTATCATAGAGCC
CACGTCAGGGAACATGGGAATAAGCATGGCGTTTATGGCAGCAATGAAAG
GGTATAAGATGGTTCTAACTATGCCCTCTTATACAAGCTTGGAGAGGAGA
GTGACAATGAGAGCATTTGGAGCTGATTTAATCCTCACAGATCCAGCCAA
GGGGATGGGAGGAACTGTTAAGAAGGCTCAAGAACTTTTGGAATCCACAC
CAAATGCTTTCATGCTTCAACAATTTTCAAATCCTGCCAATACGCGGGTT
CATTTTGAGACAACTGGTCCTGAGATATGGGAGGATACGATGGGACAAGT
AGACATCTTTGTAATGGGAATCGGTAGTGGAGGAACAGTCTCTGGTGTCG
GGCAGTATCTTAAATCTCAAAATCCTAATGTTAAGATCTATGGAGTGGAA
CCAGCTGAAAGTAATATATTGAATGGGGGCAAACCAGGTCCTCATCTCAT
TACTGGCAATGGCGTTGGATTCAAA
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