FC931058

Overview
NameFC931058
Unique NameFC931058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15364 contig Ccv1_Contig15364:3..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC931058 vs. ExPASy Swiss-Prot
Match: MPCP_YEAST (Mitochondrial phosphate carrier protein OS=Saccharomyces cerevisiae GN=MIR1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.160e-18
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 2 
Query:  314 VVAAPSEPRKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKY-KSISSGFGVLLKEQGIRGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYAAKYKTLIYLAGSASAEFIADXALCPL 724
            V AAP+ P+    YS + Y    + G + CG TH+++ P+D+VK  +Q++P  Y K +   F  ++  +G      G+ PTLLGYS QGA              D  G + A++YK  +Y+  +A AEF+AD ALCPL
Sbjct:    3 VSAAPAIPQ----YSVSDYMKFALAGAIGCGSTHSSMVPIDVVKTRIQLEPTVYNKGMVGSFKQIIAGEGAGALLTGFGPTLLGYSIQGAFKFGGYEVFKKFFIDNLGYDTASRYKNSVYMGSAAMAEFLADIALCPL 136
The following BLAST results are available for this feature:
BLAST of FC931058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MPCP_YEAST1.160e-1836.96Mitochondrial phosphate carrier protein OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionC34100H12EF PostHarvP1 Citrus clementina cDNA clone C34100H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931058 ID=FC931058; Name=FC931058; organism=Citrus clementina; type=EST; length=726bp
GAAAAAGCGGAATTGCTTTTCCCGGGTTCTAACAAATTGGAAGCGAGAGA
CAGGAGGAGGAGAAGAGAAAGAGAAAATTAGAAGAATTCTCTCTGTCTCG
CTCTTTTTCTCTATAATTCAATCAAGCTTTTTACTCTCAAAATCAAATTT
CAAAAATTCCGAAATGGCCCTCACAGAATCTTATAGGAAAAACTCTCTGA
TACCAAGCTACCTCTACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCT
TTCAATGGAGCGGCAGCAGCCGCCACGTCGCCGGCTACTCCATCCACGGC
GAGGAGGAGCTTCGTTGTTGCGGCACCGAGCGAGCCAAGGAAGATAGAGA
TGTACTCCCCTGCATTCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGC
TGCGGTCTCACTCACACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAA
TATGCAGATTGATCCTGTTAAGTATAAAAGCATATCATCTGGTTTTGGAG
TTTTGCTCAAGGAACAGGGAATCAGGGGCTTCTTCAGGGGATGGGTACCT
ACCTTGCTTGGTTACAGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGA
GTTCTTCAAGAAGTACTACTCTGACATTGCTGGTCCAGAGTATGCTGCTA
AGTACAAGACTTTAATCTACCTTGCTGGCTCTGCTTCTGCTGAGTTCATT
GCTGATGNTGCTCTTTGCCCCCTTTG
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