FC931060

Overview
NameFC931060
Unique NameFC931060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 68/199 (34.17%), Postives = 120/199 (60.30%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            LL+ +SG  R G + A++G SG+GK+TL+D LA R     + G I ++G   +      +S Y  Q D+  P +T+ E+L++SA  RL   +  KK+K  V  +++ + L+     ++G  G  G+S  +R+R++I  +++ +P I+F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  I    D+L+ +
Sbjct:  133 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFL 331          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB19G_ARATH (ABC transporter G family member 19 OS=Arabidopsis thaliana GN=ABCG19 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.960e-30
Identity = 68/200 (34.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARV-SGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            LL  VSG    G + A++G SGAGK+TL+D LAGR   G + G + ++G    Q    +V S Y  Q D+  P +T+ E+L++++  RL   +   K+   V+ +++ + L+   + ++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+  A +V++ ++    +G  V+ +IHQPS  I E  D L+++
Sbjct:   99 LLDDVSGEASDGDILAVLGASGAGKSTLIDALAGRVAEGSLRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKMERVEALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSIVIMSIHQPSARIVELLDRLIIL 298          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.343e-30
Identity = 73/207 (35.27%), Postives = 125/207 (60.39%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPL--------RDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +L  ++G+  PG + ALMG SG+GKTTL+ ++ GR T   ++G +  +  P       R+ G+  Q D+  P +T+ E+L ++A+LRL S +  +++   ++ +++ + L+          R   VG   V G+S  +RKR +IA E++ +PS++ +DEPTSGLD+ +A  ++  ++     GRTV+ TIHQPS  +F  FD+LLL+
Sbjct:  106 ILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDN-VKGKLTYNDIPYSPSVKRRI-GFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGLERFIEKHNERCRRTRVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLLI 310          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AUS1_YEAST (ATP-dependent permease AUS1 OS=Saccharomyces cerevisiae GN=AUS1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29
Identity = 83/202 (41.09%), Postives = 119/202 (58.91%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQE-TFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +L+++ SG    G LTALMG SGAGKTTL++VL+ R   G + G+I I G+P   E  F R  G+ +Q D+H   +++ ESL  S  LR   D      + ++D V  L++L    D LV       L+  QRK L+I VELV  PS++ F+DEPTSGLDA AA  +++ ++     G+ + CTIHQPS  +   FD + L+
Sbjct:  764 KLINNASGFISSG-LTALMGESGAGKTTLLNVLSQRVETGVVSGEILIDGHPLTDEDAFKRSIGFVQQQDLHLDLLSVKESLEISCLLRGDGD------RAYLDTVSNLLKLPS--DILVA-----DLNPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVKFLKQLSLQGQAIFCTIHQPSKSVISHFDNIFLL 951          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB18G_ARATH (ABC transporter G family member 18 OS=Arabidopsis thaliana GN=ABCG18 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 66/200 (33.00%), Postives = 122/200 (61.00%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARV-SGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            LL  ++G  R G + A++G SGAGK+TL+D LAGR     ++G + ++G    Q    +V S Y  Q D+  P +T+ E+L++++  RL   +   K+   V+ +++ + L+   D ++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+  A +V++ ++    +G  V+ +IHQPS  I    D L+++
Sbjct:   91 LLDDITGEARDGEILAVLGGSGAGKSTLIDALAGRVAEDSLKGTVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLPKSKKMERVETLIDQLGLRNAADTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTNAFMVVQVLKRIAQSGSVVIMSIHQPSARIIGLLDRLIIL 290          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: WHITE_ANOAL (Protein white OS=Anopheles albimanus GN=W PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.696e-29
Identity = 80/212 (37.74%), Postives = 117/212 (55.19%), Query Frame = 1
Query:   64 RLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--------GYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIF-VDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            R  LL +V+G  R G L A+MG SGAGKTTL++ LA R   G     +KIS        G P   E       Y +Q D+  P +T  E L++ A LR+  DV     K+  VDEV++ + L    D ++G+ G V GLS  +RKR     E + +P ++  DEPTS LD+  A  V++ ++     G+T++ TIHQPS +++  FD +LL+
Sbjct:  115 RKHLLKNVTGVARSGELLAVMGSSGAGKTTLLNELAFRSPPG-----VKISPNAIRTLNGVPVTAEQMRARCAYVQQDDLFIPSLTTKEHLMFQAMLRMGRDVPATPIKMHRVDEVLQELSLVKCADTIIGVAGRVKGLSGGERKRTAFRSETLTDPHLLLCDEPTSSLDSFMAQSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDRILLV 321          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 1.834e-28
Identity = 82/202 (40.59%), Postives = 116/202 (57.43%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQ-ETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +L++  SG    G LTALMG SGAGKTTL++VL+ R   G + G++ I G P    + F R  G+ +Q D+H   +T+ ESL  S  LR   D D      ++  V  L+ L    + LV       LS  QRK L+I VELV  PS++ F+DEPTSGLDA AA  +++ ++     G+ ++CTIHQPS  +   FD + L+
Sbjct:  764 KLINDASGYISSG-LTALMGESGAGKTTLLNVLSQRTESGVVTGELLIDGQPLTNIDAFRRSIGFVQQQDVHLELLTVRESLEISCVLRGDGDRD------YLGVVSNLLRLPS--EKLVA-----DLSPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVQFLKKLSMQGQAILCTIHQPSKSVISYFDNIYLL 951          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG8_RAT (ATP-binding cassette sub-family G member 8 OS=Rattus norvegicus GN=Abcg8 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.086e-28
Identity = 70/199 (35.18%), Postives = 116/199 (58.29%), Query Frame = 1
Query:   76 LHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            + ++S   R G + A++G +G G+ TL+DV+ GR  GG ++ G I I+G P   +   +   +  Q D   P++T+ E+L + A +RL       +R   V++V+  + L+   +  VG   V G+S  +R+R++I V+L+ NP I+ +DEPTSGLD+  A  ++RT+       R V+ ++HQP  DIF  FD +LLM
Sbjct:  110 IRNLSFKVRSGQMLAIIGSAGCGRATLLDVITGRDHGGKMKSGQIWINGQPSTPQLIQKCVAHVRQQDQLLPNLTVRETLTFIAQMRLPKTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVRTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLM 308          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB5G_ARATH (ABC transporter G family member 5 OS=Arabidopsis thaliana GN=ABCG5 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.086e-28
Identity = 73/223 (32.74%), Postives = 130/223 (58.30%), Query Frame = 1
Query:   22 DMPAEMKTEGV------GEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLM 669
            D P + + E +      G     +L  V+   +P  + A++G SGAGK++L+++LA R       G + ++  P  +  F ++SGY  Q D   P +T+ E+LL+SA LRL    D  + +  V  ++  + L+ +  A VG   V G+S  +R+R++I VE++ +P ++ +DEPTSGLD+ +A +++  +++  +T GRT++ TIHQP   I + F+ +LL+
Sbjct:   39 DQPVKTEEESLKLEDETGNKVKHVLKGVTCRAKPWEILAIVGPSGAGKSSLLEILAARLIPQ--TGSVYVNKRPVDRANFKKISGYVTQKDTLFPLLTVEETLLFSAKLRLKLPADELRSR--VKSLVHELGLEAVATARVGDDSVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALLIIDMLKHMAETRGRTIILTIHQPGFRIVKQFNSVLLL 257          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG8_HUMAN (ATP-binding cassette sub-family G member 8 OS=Homo sapiens GN=ABCG8 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.970e-28
Identity = 71/199 (35.68%), Postives = 116/199 (58.29%), Query Frame = 1
Query:   76 LHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            + ++S   R G + A++G SG G+ +L+DV+ GR  GG I+ G I I+G P   +   +   +  Q +   P++T+ E+L + A +RL       +R   V++V+  + L+   D  VG   V GLS  +R+R++I V+L+ NP I+ +DEPTSGLD+  A  +++T+       R V+ ++HQP  DIF  FD +LLM
Sbjct:   88 IQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVRQHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVGNMYVRGLSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLM 286          
The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
AB2G_ARATH1.960e-3034.17ABC transporter G family member 2 OS=Arabidopsis t... [more]
AB19G_ARATH1.960e-3034.00ABC transporter G family member 19 OS=Arabidopsis ... [more]
AB26G_ARATH3.343e-3035.27ABC transporter G family member 26 OS=Arabidopsis ... [more]
AUS1_YEAST1.270e-2941.09ATP-dependent permease AUS1 OS=Saccharomyces cerev... [more]
AB18G_ARATH2.167e-2933.00ABC transporter G family member 18 OS=Arabidopsis ... [more]
WHITE_ANOAL3.696e-2937.74Protein white OS=Anopheles albimanus GN=W PE=3 SV=... [more]
PDR11_YEAST1.834e-2840.59ATP-dependent permease PDR11 OS=Saccharomyces cere... [more]
ABCG8_RAT4.086e-2835.18ATP-binding cassette sub-family G member 8 OS=Ratt... [more]
AB5G_ARATH4.086e-2832.74ABC transporter G family member 5 OS=Arabidopsis t... [more]
ABCG8_HUMAN6.970e-2835.68ATP-binding cassette sub-family G member 8 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionC34101A02EF PostHarvP1 Citrus clementina cDNA clone C34101A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bp
GACCAGATGAATTACTACGTCGATATGCCAGCAGAAATGAAAACTGAAGG
AGTTGGAGAAGATCGTCTTCAACTGTTACACAGTGTCAGTGGTGCATTCA
GACCAGGAGTACTGACAGCATTAATGGGTGTAAGTGGTGCAGGGAAGACA
ACTCTAATGGATGTATTGGCAGGAAGGAAGACCGGAGGATACATCGAAGG
AGACATTAAGATTTCTGGTTACCCCAAAAAACAAGAAACGTTTGCTCGTG
TCAGTGGTTATTGTGAACAGACTGACATTCATTCTCCTCATGTTACTCTC
TATGAATCTCTTCTCTACTCAGCATGGCTTCGTCTTTCTTCAGACGTCGA
TACAAAAAAACGAAAGATATTCGTTGATGAAGTTATGGAGTTGGTTGAGC
TTAAACCATTGAGGGATGCTTTGGTTGGCCTTCCAGGAGTAAATGGTCTT
TCAACAGAGCAAAGGAAGAGATTGACAATTGCTGTAGAATTGGTTGCTAA
CCCTTCAATCATCTTCATGGACGAGCCAACATCTGGCCTTGATGCTAGAG
CAGCTGCTATTGTCATGCGTACGGTTAGAAATACAGTGGATACAGGGAGA
ACGGTTGTGTGCACAATTCATCAGCCAAGCATAGACATTTTTGAAGCATT
TGATGAGCTTTTGTTAATG
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