FC931060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB9G_ARATH (ABC transporter G family member 9 OS=Arabidopsis thaliana GN=ABCG9 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.553e-27 Identity = 68/188 (36.17%), Postives = 114/188 (60.64%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR--KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 630 +L ++G +PG + A++G SG+GKT+L+ L GR + G + G+I + P + R +G+ Q D P++T+ E+L+++A LRL + +++ VM + L +D ++G P + G+S +RKR++I E++ NPS++F+DEPTSGLD+ A ++ + GRTVV TIHQPS Sbjct: 66 ILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVGEGKGKLTGNISYNNKPLSKAV-KRTTGFVTQDDALYPNLTVTETLVFTALLRLPNSFKKQEKIKQAKAVMTELGLDRCKDTIIGGPFLRGVSGGERKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELARGGRTVVTTIHQPS 252
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: YO075_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YOL075C OS=Saccharomyces cerevisiae GN=YOL075C/YOL074C PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.028e-27 Identity = 77/219 (35.16%), Postives = 128/219 (58.45%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKI----------SGYPKKQETFAR--------VSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLM 669 L+++ S G + A+MG SG+GKTTL++VLA + +GG G I+ PK+ + + Y Q D+ SP +T E+L ++A L+L+S TKK + V++++E + LK D LVG GLS +++RL+I ++++NPSI+F+DEPT+GLDA +A +V++T++ + GRT + +IHQP DI D++ ++ Sbjct: 44 LVNTFSMDLPSGSVMAVMGGSGSGKTTLLNVLASKISGGLTHNGSIRYVLEDTGSEPNETEPKRAHLDGQDHPIQKHVIMAYLPQQDVLSPRLTCRETLKFAADLKLNSSERTKK--LMVEQLIEELGLKDCADTLVGDNSHRGLSGGEKRRLSIGTQMISNPSIMFLDEPTTGLDAYSAFLVIKTLKKLAKEDGRTFIMSIHQPRSDILFLLDQVCIL 260 HSP 2 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 65/207 (31.40%), Postives = 121/207 (58.45%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI-----EGDIKISGYPKKQETFARVSGYCEQTDIHS-PHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLM 669 ++L SV+ F+PG++ A+MG SG+GK++L+++++GR G I + + F V Y Q D H +T+ E+L Y+A LRL + ++ + D ++ + LK + ++G V G+S +++R+T+ V+L+ +P I+ +DEPTSGLD+ +A ++ + + G+T++ TIHQP ++F+ F +LL+ Sbjct: 708 EILQSVNAIFKPGMINAIMGPSGSGKSSLLNLISGRLKSSVFAKFDTSGSIMFNDIQVSELMFKNVCSYVSQDDDHLLAALTVKETLKYAAALRLHHLTEAERMER-TDNLIRSLGLKHCENNIIGNEFVKGISGGEKRRVTMGVQLLNDPPILLLDEPTSGLDSFTSATILEILEKLCREQGKTIIITIHQPRSELFKRFGNVLLL 913
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG5_MOUSE (ATP-binding cassette sub-family G member 5 OS=Mus musculus GN=Abcg5 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.649e-27 Identity = 67/204 (32.84%), Postives = 120/204 (58.82%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRL---SSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 Q+L VS G + ++G SG+GKTTL+D ++GR + G +EG++ ++G +++ F Y Q+D+ +T+ E+L Y+A L L S+D KK V+ VM + L + D ++G G+S+ +R+R++IA +L+ +P ++ +DEPT+GLD A ++ + R V+ TIHQP ++F+ FD++ ++ Sbjct: 68 QILKDVSLYIESGQIMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCFSYVLQSDVFLSSLTVRETLRYTAMLALCRSSADFYNKK----VEAVMTELSLSHVADQMIGSYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANQIVLLLAELARRDRIVIVTIHQPRSELFQHFDKIAIL 267
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG3_MOUSE (ATP-binding cassette sub-family G member 3 OS=Mus musculus GN=Abcg3 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.459e-27 Identity = 73/201 (36.32%), Postives = 116/201 (57.71%), Query Frame = 1 Query: 67 LQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 ++ L ++SG +PG L A+MG ++ L+DVLA R+ + GDI I+G P+ F SGY Q D+ VT+ ++L +SA LRL + +++ ++EV+EL+ L ++ + S E RKR +IA+ELV I+F+D+PT+GLD R V+ +R GRT++ +I+QP IF+ FD L L+ Sbjct: 61 IERLSNISGIMKPG-LNAIMGPQDGSRSLLLDVLAARRDPRGLSGDILINGKPRPAN-FKCTSGYVPQNDVVLGTVTVRDNLEFSAALRLPVTITRDEKRRRINEVLELLHLNKEQN-------IKPRSKELRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVILVLRRMSKKGRTIIFSINQPQYSIFKFFDSLTLV 252
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG8_MOUSE (ATP-binding cassette sub-family G member 8 OS=Mus musculus GN=Abcg8 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.707e-27 Identity = 69/199 (34.67%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 76 LHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIE-GDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 + ++S R G + A++G SG G+ +L+DV+ GR GG ++ G I I+G P + + + Q D P++T+ E+L + A +RL +R V++V+ + L+ + VG V G+S +R+R++I V+L+ NP I+ +DEPTSGLD+ A ++ T+ R V+ ++HQP DIF FD +LLM Sbjct: 89 IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLFDLVLLM 287
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG5_RAT (ATP-binding cassette sub-family G member 5 OS=Rattus norvegicus GN=Abcg5 PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 4.995e-26 Identity = 65/202 (32.18%), Postives = 118/202 (58.42%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRL-SSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 ++L VS G ++G SG+GKTTL+D ++GR + G +EG++ ++G +++ F Y Q+D+ +T+ E+L Y+A L L SS D +K V+ V+ + L + D ++G G+S+ +R+R++IA +L+ +P ++ +DEPT+GLD A ++ + R V+ TIHQP ++F FD++ ++ Sbjct: 68 KILKDVSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCVSYLLQSDVFLSSLTVRETLRYTAMLALRSSSADFYDKK--VEAVLTELSLSHVADQMIGNYNFGGISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRNRIVIVTIHQPRSELFHHFDKIAIL 267
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: PDR1_SCHPO (ATP-binding cassette transporter pdr1 OS=Schizosaccharomyces pombe GN=pdr1 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.523e-25 Identity = 68/201 (33.83%), Postives = 119/201 (59.20%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 Q+L +VSG + LTAL+G + +GK+ L+ +L+ R G +EG+I +SG + R+ GY + + T+ E+L A LR S ++ +V+ V++ + L + D +VG G GLS ++ L+IAVEL A P SI+ +DEP +GLD+++A +++ ++ +G +++C++ QPS I E FD +L++ Sbjct: 775 QILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLKNPKNLRKRI-GYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGDMG-KGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARSGLSILCSVSQPSSRILELFDMMLIL 973
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG5_HUMAN (ATP-binding cassette sub-family G member 5 OS=Homo sapiens GN=ABCG5 PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24 Identity = 66/201 (32.84%), Postives = 113/201 (56.22%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-TGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 Q+L VS G + ++G SG+GKTTL+D ++GR G G++ ++G ++E F Y Q+D +T+ E+L Y+A L + +K V+ VM + L + D L+G + G+ST +R+R++IA +L+ +P ++ DEPT+GLD A ++ + R VV TIHQP ++F+ FD++ ++ Sbjct: 67 QILKDVSLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFLGEVYVNGRALRREQFQDCFSYVLQSDTLLSSLTVRETLHYTALLAIRRGNPGSFQKK-VEAVMAELSLSHVADRLIGNYSLGGISTGERRRVSIAAQLLQDPKVMLFDEPTTGLDCMTANQIVVLLVELARRNRIVVLTIHQPRSELFQLFDKIAIL 266
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: BROWN_DROVI (Protein brown OS=Drosophila virilis GN=bw PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.273e-21 Identity = 64/197 (32.49%), Postives = 110/197 (55.84%), Query Frame = 1 Query: 4 QMNYYVDMPAEMKTEGVGEDRLQ----LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN 582 Q+NYYV + E R Q +LH VSG + G L A++G SGAGKTTL+ ++ R G + GD+ ++G +++ R+S + + +I+ T Y+ L + + ++ +++ V +++ V L RDA + LS +RKRL++A EL+ +P +F DEPT+GLD+ +A V++T+R+ Sbjct: 18 QLNYYVPAQEQSNYSFWNECRKQRELGILHDVSGHLKTGDLIAILGGSGAGKTTLLAAISQRLRGN-LTGDVVLNGMAMERDQMTRISSFLREFEINVKTFTAYDDLYFMSHFKMHRRTTKSEKRQAVSDLLLAVGL---RDA--AHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYTVIKTLRH 208
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB8G_ARATH (ABC transporter G family member 8 OS=Arabidopsis thaliana GN=ABCG8 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.838e-21 Identity = 63/200 (31.50%), Postives = 109/200 (54.50%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 +L +++ P + A++G SGAGK+TL+D+LA + + G I ++ P ++ ++S Y Q D P +T+ E+ ++A L L + + + + L L R A GLS +R+R++I + L+ +P + +DEPTSGLD+++A V+ +++ V RTV+ +IHQPS I D LLL+ Sbjct: 44 ILRNITLTAHPTEILAVVGPSGAGKSTLLDILASKTSP--TSGSILLNSIPINPSSYRKISSYVPQHDSFFPLLTVSETFSFAACLLLPNPSIVSETVTSLLSELNLTHLSHTRLA-------QGLSGGERRRVSIGLSLLHDPCFLLLDEPTSGLDSKSAFDVIHILKSIAVSRQRTVILSIHQPSFKILSIIDRLLLL 234 The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bpback to top |