FC931060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB4G_ARATH (ABC transporter G family member 4 OS=Arabidopsis thaliana GN=ABCG4 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.253e-21 Identity = 62/200 (31.00%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 +L +++ P + A++G SGAGK+TL+D+LA R + G I ++ ++ ++S Y Q D P +T+ E+ +SA L L ++ K V +++ + L L +G GLS +R+R++I + L+ +P ++ +DEPTSGLD+++A V++ +++ R V+ +IHQPS I D +LL+ Sbjct: 30 ILRNITLTSHPSQILAIIGPSGAGKSTLLDILAARTSP--TSGSILLNSVLINPSSYRKISSYVPQHDTFFPLLTVSETFTFSASLLLPKNLS--KVSSVVASLLKELNLTHLAHTRLG----QGLSGGERRRVSIGLSLLHDPEVLLLDEPTSGLDSKSAFDVVQILKSIATSRERIVILSIHQPSFKILSLIDRVLLL 221
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: BROWN_DROME (Protein brown OS=Drosophila melanogaster GN=bw PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20 Identity = 66/211 (31.28%), Postives = 112/211 (53.08%), Query Frame = 1 Query: 4 QMNYYVDMPAEMKTEGVGEDR----LQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 624 Q+NYYV + E R L++L SG + G L A++G SGAGKTTL+ ++ R G + GD+ ++G ++ R+S + Q +I+ T YE L + + ++ +++ V +L+ LRDA + LS +RKRL++A EL+ +P +F DEPT+GLD+ +A V++T+R+ R +++Q Sbjct: 21 QLNYYVPDQEQSNYSFWNECRKKRELRILQDASGHMKTGDLIAILGGSGAGKTTLLAAISQRLRGN-LTGDVVLNGMAMERHQMTRISSFLPQFEINVKTFTAYEHLYFMSHFKMHRRTTKAEKR---QRVADLLLAVGLRDA--AHTRIQQLSGGERKRLSLAEELITDPIFLFCDEPTTGLDSFSAYSVIKTLRHLCTRRRIAKHSLNQ 225
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB23G_ARATH (ABC transporter G family member 23 OS=Arabidopsis thaliana GN=ABCG23 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.839e-20 Identity = 69/209 (33.01%), Postives = 120/209 (57.42%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-------KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVN--GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELLLM 669 +L+SVS A + A++G SG GK+TL+ +++GR + + + KI+ Y + + R+ G+ Q D P +T+ E+L+YSA L D K+R+ V+ ++ + L ++D+ VG G+S +RKR++IAVE++ +P I+ +DEPTSGLD+R + V+ + + RTV+ +IHQPS I + + L++ Sbjct: 66 ILNSVSLAAESSKILAVVGPSGTGKSTLLKIISGRVNHKALDPSSAVLMNNRKITDYNQLR----RLCGFVPQDDDLLPLLTVKETLMYSAKFSLR-DSTAKEREERVESLLSDLGLVLVQDSFVGEGDEEDRGVSGGERKRVSIAVEMIRDPPILLLDEPTSGLDSRNSLQVVELLATMAKSKQRTVLFSIHQPSYRILDYISDYLIL 269
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB3G_ARATH (ABC transporter G family member 3 OS=Arabidopsis thaliana GN=ABCG3 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.915e-19 Identity = 68/218 (31.19%), Postives = 119/218 (54.59%), Query Frame = 1 Query: 22 DMPAEMKTEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 D+ MK + D++ + S +G PG +T +MG + +GK+TL+ LAGR + G++ ++G K G+ E+ +T+ E L YSA L+L + K+ V++ ++ + L + L+G + GL + +R+R++IA ELV P I+F+DEP LD+ +A ++M T++ G T+V TI+Q S ++F FD + L+ Sbjct: 118 DLTVTMKGKRKYSDKV--VKSSNGYAFPGTMTVIMGPAKSGKSTLLRALAGRLPPSAKMYGEVFVNG--SKSHMPYGSYGFVERETQLIGSLTVREFLYYSALLQLPGFLFQKRS--VVEDAIQAMSLSDYANKLIGGHCYMKGLRSGERRRVSIARELVMRPHILFIDEPLYHLDSVSALLMMVTLKKLASMGCTLVFTIYQSSTEVFGLFDRICLL 329
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCA2_HUMAN (ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 100 RPGVLTALMGVSGAGKTTLMDVLAGRK--TGG--YIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 RPG L+GV+GAGKT+ +L G + TGG ++ G + + Q++ GYC Q D +T E L LR + K V +E +EL D G S +++L+ A+ L+ P+ IF+DEPT+G+D +A + + + + TGR+VV T H Sbjct: 2078 RPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSL----GYCPQCDALFDELTAREHLQLYTRLR---GISWKDEARVVKWALEKLELTKYADKPAGT-----YSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSH 2243
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCA2_RAT (ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus GN=Abca2 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 100 RPGVLTALMGVSGAGKTTLMDVLAGRK--TGG--YIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 RPG L+GV+GAGKT+ +L G + TGG ++ G + + Q++ GYC Q D +T E L LR + K V +E +EL D G S +++L+ A+ L+ P+ IF+DEPT+G+D +A + + + + TGR+VV T H Sbjct: 2079 RPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKDLLQVQQSL----GYCPQFDALFDELTAREHLQLYTRLR---GIPWKDEAQVVRWALEKLELTKCADKPAG-----SYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSH 2244
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCA2_MOUSE (ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2 PE=1 SV=4) HSP 1 Score: 78.1814 bits (191), Expect = 4.386e-14 Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 100 RPGVLTALMGVSGAGKTTLMDVLAGRK--TGG--YIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 RPG L+GV+GAGKT+ +L G + TGG ++ G + + Q++ GYC Q D +T E L LR + K V +E +EL D G S +++L+ A+ L+ P+ IF+DEPT+G+D +A + + + + TGR+VV T H Sbjct: 2079 RPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKDLLQVQQSL----GYCPQFDALFDELTAREHLQLYTRLR---GIPWKDEAQVVKWALEKLELTKYADKPAGT-----YSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSH 2244
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_BURTA (Nod factor export ATP-binding protein I OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=nodI PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14 Identity = 59/191 (30.89%), Postives = 100/191 (52.36%), Query Frame = 1 Query: 58 EDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISG--YPKKQETFARVSGYCEQTDIHSPHVTLYESLL-YSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 +D+L ++ +S +PG L+G +GAGKTT + +L G G I + G P + R G Q D P T+ E+LL ++ + L++ + + V ++E +L+ DA VG LS ++RLT+A LV NP ++ +DEPT+GLD +A ++ +R+ + G+T++ T H Sbjct: 16 DDKL-VVDGLSFHVQPGECFGLLGPNGAGKTTALKMLLGITHPD--AGSISLCGEPVPSRARHARRRVGVVPQFDNLDPDFTVRENLLVFARYFGLAAH----EARALVPPLLEFAKLENKADAKVG-----ELSGGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVRGKTILLTTH 194
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_RALME (Nod factor export ATP-binding protein I OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14 Identity = 56/177 (31.64%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 100 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQET-FARVS-GYCEQTDIHSPHVTLYESL-LYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 +PG L+G +GAGKTT + +L G T G + + G P Q AR+ G Q D P ++ E+L ++ + LSS ++ V +++E L+ DA V LS R+RLT+A L+ +P ++ MDEPT+GLD +A ++ +++ + G+T++ T H Sbjct: 28 QPGQCFGLLGPNGAGKTTTLRMLLGLTTPA--SGTLMLCGEPIPQRAPQARMRVGVVPQFDNLDPDFSVIENLRIFGRYFGLSSAQIAER----VPKLLEFARLESRADAQV-----RDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAGKTILLTTH 193
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: LPTB_SHIFL (Lipopolysaccharide export system ATP-binding protein lptB OS=Shigella flexneri GN=lptB PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.276e-13 Identity = 57/187 (30.48%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAG---RKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 +++ VS G + L+G +GAGKTT ++ G R G I D IS P R GY Q +++Y++L+ A L++ D+ ++R+ +E+ME ++ LRD++ LS +R+R+ IA L ANP I +DEP +G+D + + R + + D+G V+ T H Sbjct: 17 RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARA-RRGIGYLPQEASIFRRLSVYDNLM--AVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDH 195 The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bpback to top |