FC931060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_BURMA (Nod factor export ATP-binding protein I OS=Burkholderia mallei GN=nodI PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 3.713e-13 Identity = 59/192 (30.73%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 58 EDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP---KKQETFARVSGYCEQTDIHSPHVTLYESLL-YSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 +D+L ++ +S +PG L+G +GAGKTT + +L G G I + G P + + RV G Q D P T+ E+LL ++ + L++ + V ++E +L+ DA VG LS ++RLT+A LV +P ++ +DEPT+GLD +A ++ +R+ + G+T++ T H Sbjct: 16 DDKL-VVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPD--AGSISLCGEPVPSRARHARQRV-GVVPQFDNLDPDFTVRENLLVFARYFGLTAHA----ARALVPPLLEFAKLESKADAKVG-----ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTH 194
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: YBD4_ENCCU (ABC transporter-like protein ECU11_1340 OS=Encephalitozoon cuniculi GN=ECU11_1340 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.850e-13 Identity = 56/208 (26.92%), Postives = 100/208 (48.08%), Query Frame = 1 Query: 58 EDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVME-LVELKPLR-DALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV-CTIHQPSIDIFEAFDELLLM 669 E +L++ ++ F+ G + A MG SG+GKTT ++ +AG +G G I + G + + F Y +Q +T+ E + Y L + + R+ +DEV+E L+ + +R + + + G + T + L ++ +DEPTS LDA A + +R+ ++V T+HQP +++ FD LL M Sbjct: 24 EKYARLINGLTADFKSGNVYAFMGTSGSGKTTTLETIAGLVPSGSRTGGRILVDGQERNPDEFPYEFAYGDQLGYIIDELTVEEFVYYYVVSSLPEESKERVRE-KMDEVLENLLNIGHIRHNKMKNISGGEQKRANLARTFTKMLLLEGELKVVLLDEPTSELDAGLALKLGEFLRDYARRSNSIVLVTVHQPGAELYNTFDNLLFM 230
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_BURCA (Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia (strain AU 1054) GN=nodI PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 57/187 (30.48%), Postives = 98/187 (52.41%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP---KKQETFARVSGYCEQTDIHSPHVTLYESLL-YSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 +++ +S + + G L+G +GAGKTT + +L G G I + G P + + RV G Q D P T+ E+LL +S + +S+ + V ++E +L+ DA VG LS ++RLT+A LV +P ++ +DEPT+GLD +A ++ +R+ + G+T++ T H Sbjct: 20 VVNGLSFSVKVGECYGLLGPNGAGKTTTLKMLLGLAHPD--AGTISLCGEPVPSRARHARQRV-GVVPQFDNLDPDFTVRENLLVFSRYFGMSAQA----ARALVAPLLEFAKLENKADAKVG-----ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILITTH 194
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCGK_DICDI (ABC transporter G family member 20 OS=Dictyostelium discoideum GN=abcG20 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.334e-13 Identity = 52/194 (26.80%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 55 GEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSG----YCEQTDIHSPHVTLYESL-LYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 G +++ +++ + G + L+G SG+GKTT++ + GR G++ + G K+ V G +C Q +TL +L +S ++ D K+ +E+++L++L + VGL LS Q+KR+++AV L+ +P ++ +DEPT G+D A+ + +R+ ++G T++ T H Sbjct: 23 GYGNTKVIDNLNLQIKSGTINCLIGASGSGKTTILRTILGRLIPD--SGEVLVFG--KRPHDIGGVPGSICGFCPQEGALYYDLTLDHTLNFFSNVHQIPKDKFESKK----NEIIKLLDLPQINSRSVGL-----LSGGQKKRVSLAVALLHSPKLLILDEPTVGIDMEVASNIWSYLRSLANSGVTIIITTH 203
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_RHIS3 (Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) GN=nodI PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.080e-12 Identity = 62/204 (30.39%), Postives = 102/204 (50.00%), Query Frame = 1 Query: 19 VDMPAEMKTEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPK-KQETFARVS-GYCEQTDIHSPHVTLYESLL-YSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 +D+ K+ G D+L +++ +S G L+G +GAGK+T+ +L G G I + G P + AR S G Q D T+ E+LL + + +S T+K K + ++E L+ DA VG LS ++RLT+A L+ +P ++ MDEPT+GLD A ++ +R + G+T++ T H Sbjct: 6 IDLAGVKKSFG---DKL-VVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPD--AGKITVLGEPVGARSRLARKSIGVVPQFDNLDQEFTVRENLLVFGRYFGMS----TRKIKEVIPSLLEFARLESKADARVG-----ELSGGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLARGKTIILTTH 194
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: YWJA_BACSU (Uncharacterized ABC transporter ATP-binding protein ywjA OS=Bacillus subtilis GN=ywjA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.411e-12 Identity = 56/191 (29.32%), Postives = 94/191 (49.21%), Query Frame = 1 Query: 58 EDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCE--QTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 624 +D +L+ ++ + + G A +G SGAGK+TL +L EGDI I G K T + + G Q D+ TL E++ Y D+ ++ ++E++ + D ++G GV LS Q++RL+IA + NPSI+ +DE TS LD A + + ++ + GRT + H+ Sbjct: 343 DDHHNVLNDINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYEAS--EGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEELVH--NMPDGLDTMIGERGVK-LSGGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQE-LSEGRTTLVIAHR 527
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: MACB_SYNFM (Macrolide export ATP-binding/permease protein macB OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=macB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 62/204 (30.39%), Postives = 97/204 (47.55%), Query Frame = 1 Query: 40 KTEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLA--GRKTGGY--IEGDIKISGYPKKQETFA-RVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTV-RNTVDTGRTVVCTIHQPSI 633 KT +GE + +L +S PG ALMG SG+GKTTLM++L R T G+ +G + P ++ R G+ Q P ++ E+++ D R + L+ L + L P + LS Q++R+ IA L+ NPS++F DEPT LD+ + V+R R + G T++ H PS+ Sbjct: 11 KTYRLGEIDVPVLRGISLKVSPGDFVALMGTSGSGKTTLMNILGCLDRPTSGHYRFDGQDVVDLTPDQRAALRNRKIGFVFQNFNLLPRMSAVENVMMPLSYAGGGVSDQNGR----ERAGALLTRMGLGEHLDNEP--SQLSGGQQQRVAIARALINNPSLLFADEPTGNLDSATSEEVLRVFQRLNEEEGVTIILVTHDPSV 208
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCA3_HUMAN (ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.407e-12 Identity = 55/194 (28.35%), Postives = 95/194 (48.97%), Query Frame = 1 Query: 52 VGEDRLQLL--HSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQET--FARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 V E R+ LL +S A + G L+G +GAGKTT +L G ++ GD + G+ + + GYC Q D H+T E L+ A LR + + V+ + + L+P + LV S +++L+ + L+ P++IF+DEP++G+D A ++ TV ++G+ ++ T H Sbjct: 1389 VYEQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEES--LTSGDAFVGGHRISSDVGKVRQRIGYCPQFDALLDHMTGREMLVMYARLR---GIPERHIGACVENTLRGLLLEPHANKLV-----RTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARARESGKAIIITSH 1572 HSP 2 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 54/174 (31.03%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 106 GVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQET--FARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 G +T L+G +GAGKTT + +L G G ISGY Q+ + G C Q DI ++T+ E L + A L+ S R+ +EV +++ + L D LS R++L+I + L+A ++ +DEPTSG+DA + + ++ + RT+V T H Sbjct: 559 GQITVLLGHNGAGKTTTLSMLTGLFPP--TSGRAYISGYEISQDMVQIRKSLGLCPQHDILFDNLTVAEHLYFYAQLKGLS------RQKCPEEVKQMLHIIGLEDKWNSRSRF--LSGGMRRKLSIGIALIAGSKVLILDEPTSGMDAISRRAIWDLLQRQ-KSDRTIVLTTH 721
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_RHIGA (Nod factor export ATP-binding protein I OS=Rhizobium galegae GN=nodI PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 56/186 (30.11%), Postives = 95/186 (51.08%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQET-FARVS-GYCEQTDIHSPHVTLYESLL-YSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 ++ S+S R G L+G +GAGK+T+ +L G T G I + G P + AR S G Q D T+ E+LL + + ++S T+ + + ++E +L+ D V + LS ++RLT+A LV +P ++ +DEPT+GLD A + +R+ + G+T++ T H Sbjct: 63 VVDSLSFGVRAGECFGLLGPNGAGKSTITRMLLGMATPS--AGKISVLGLPVPGKARLARASIGVVSQFDNLDMEFTVRENLLVFGRYFQMS----TRAIEKLIPSLLEFAQLEAKADVRV-----SDLSGGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRGKTILLTTH 237
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: NODI_RALEJ (Nod factor export ATP-binding protein I OS=Ralstonia eutropha (strain JMP134) GN=nodI PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.143e-12 Identity = 54/176 (30.68%), Postives = 92/176 (52.27%), Query Frame = 1 Query: 106 GVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP---KKQETFARVSGYCEQTDIHSPHVTLYESL-LYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 G L+G +GAGKTT + +L G T G + + G P + + RV G Q D P ++ E+L ++ + LSS V ++ V ++E L+ +A V LS R+RLT+A L+ +P ++ MDEPT+GLD +A ++ +++ + +G+T++ T H Sbjct: 52 GQCFGLLGPNGAGKTTTLRLLLGLTTPA--GGSLTLCGEPIPERAPQARMRV-GVVPQFDNLDPDFSVIENLRIFGRYFGLSSAVIERR----VPALLEFARLENRANAQV-----RDLSGGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASGKTILLTTH 215 The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bpback to top |