FC931060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: CYSA_MESVI (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Mesostigma viride GN=cysA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 56/200 (28.00%), Postives = 100/200 (50.00%), Query Frame = 1 Query: 70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETF-ARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 666 Q L+ ++ + G + AL+G SG+GK+TL+ ++AG T EG I ISG + +R G+ Q ++T+Y+++ + LR S D ++ V++++ELV+L+ L G LS QR+R+ +A L P ++ +DEP LDAR + +R+ + + + E DE+++ Sbjct: 16 QALNHINLEIKSGSIIALLGPSGSGKSTLLRIIAGLDTPD--EGTIWISGKNASGYSIQSRNIGFVFQNYALFKNMTVYDNIAFGLELRRISFNDISRK---VNKLLELVQLQNL-----GHRYPAQLSGGQRQRIALARALAIEPKVLLLDEPFGALDARVRKNLRAWLRDLHNKFSITTIIVTHDQQEAMEIADEIVV 205
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: BMRA_BACSU (Multidrug resistance ABC transporter ATP-binding/permease protein bmrA OS=Bacillus subtilis GN=bmrA PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 67/212 (31.60%), Postives = 105/212 (49.53%), Query Frame = 1 Query: 10 NYYVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAG--RKTGGYIE-GDIKISGYPKKQETFARVSGYCEQTDIHSPHV--TLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 630 N ++ + + + G D+L +L VS G +TA++G SG GKTTL +L T G I GD + Y E++ GY Q SP + T+ E++ Y R +D + +K + + EL D VG G+ LS QR+R+ IA L+ NPSI+ +DE TS LD+++ V + + ++ GRT + H+ S Sbjct: 336 NAHLPIQLDRVSFGYKPDQL-ILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTY--SLESWREHIGYVSQ---ESPLMSGTIRENICYGLE-RDVTDAEIEKAAEMAYALNFIKELPNQFDTEVGERGIM-LSGGQRQRIAIARALLRNPSILMLDEATSSLDSQSEKSVQQALEVLME-GRTTIVIAHRLS 538
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: Y986_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv0986/MT1014 OS=Mycobacterium tuberculosis GN=Rv0986 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 56/201 (27.86%), Postives = 99/201 (49.25%), Query Frame = 1 Query: 55 GEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQET------FARVS-GYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSI 633 GE R Q+L ++ F PG AL+G SG+GK+TL+++++G + GD+ I+G+ Q+T F R G Q P +T+ E++ L + V +K + +++E V + + LS +++R+ I+ L NP ++ DEPT LD+ V+ + + T G+T++ H PS+ Sbjct: 19 GETRRQVLDHITFDFEPGEFVALLGQSGSGKSTLLNLISGIEKP--TTGDVTINGFAITQKTERDRTLFRRDQIGIVFQFFNLIPTLTVLENITLPQEL---AGVSQRKAAVVARDLLEKVGMADRERTF-----PDKLSGGEQQRVAISRALAHNPMLVLADEPTGNLDSDTGDKVLDVLLDLTRQAGKTLIMATHSPSM 209
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: CYSA_ACIAD (Sulfate/thiosulfate import ATP-binding protein cysA OS=Acinetobacter sp. (strain ADP1) GN=cysA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 56/203 (27.59%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 76 LHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQ-ETFARVSGYCEQTDIHSPHVTLYESLLYSAWLR----LSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669 L ++S F G L AL+G SG GKTTL+ ++AG ++ EG I + G R G+ Q H+++++++ + +R S+ + KKR V +++LV+L L D + LS QR+R+ +A L P ++ +DEP LDA+ + R +R D + + E D++++M Sbjct: 18 LKNISLDFPEGQLVALLGPSGCGKTTLLRIIAGLESAD--EGKILLEGADATNIHVRERQVGFVFQHYALFRHMSVFDNIAFGLRVRPRSTRPSEAEIKKR---VTRLLDLVQLGFLADRYP-----SQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRTLHDELHITSIFVTHDQEEALEVADQIIVM 210
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: CYSA2_RHIME (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Rhizobium meliloti GN=cysA2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 62/222 (27.93%), Postives = 108/222 (48.65%), Query Frame = 1 Query: 34 EMKTEGVGED--RLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLS----SDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLM 669 E++ + + ++ R L VS R G L AL+G SG+GKTTL+ ++AG ++ G GD S K+ R G+ Q H+T+ +++ + +R + S D ++R + +++ELV+L L LS QR+R+ +A + P+++ +DEP LDA+ + R +R D TG T + H + E D +++M Sbjct: 2 EVRVQNIRKEFGRFPALEDVSLDIRSGELIALLGPSGSGKTTLLRLVAGLESPTEGTIFFGDEDAS----KKTVQQRNIGFVFQHYALFRHMTVLDNVAFGLKVRPAKRRPSAADIRRRAV---DLLELVQLSGLERRYPA-----QLSGGQRQRVALARAMAVEPNVLLLDEPFGALDAQVRKELRRWLREIHDRTGHTTIFVTHDQE-EALELADRVVVM 210
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCA7_MOUSE (ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 55/180 (30.56%), Postives = 86/180 (47.78%), Query Frame = 1 Query: 103 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFA--RVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPG-----VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 PG L+GV+GAGKT+ ++ G G+ ++G+ QE A R GYC Q+D +T E L A LR + ++ + LV L GLP S +++L A+ LV +P+++F+DEPT+G+D A + ++ + V GR+VV T H Sbjct: 1833 PGECFGLLGVNGAGKTSTFRMVTGDTLPS--SGEAVLAGHNVAQERSAAHRSMGYCPQSDAIFDLLTGREHLELFARLR-----GVPEAQVAQTALSGLVRL--------GLPSYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVVREGRSVVLTSH 1997
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCA4_HUMAN (Retinal-specific ATP-binding cassette transporter OS=Homo sapiens GN=ABCA4 PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 53/180 (29.44%), Postives = 85/180 (47.22%), Query Frame = 1 Query: 100 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVS------GYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 RPG L+GV+GAGKTT +L G T GD ++G + +S GYC Q D +T E L A LR V ++ + + ++ + L D L G S +++L+ A+ L+ P ++ +DEPT+G+D +A ++ + + + GR VV T H Sbjct: 1963 RPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAG----KSILTNISEVHQNMGYCPQFDAIDELLTGREHLYLYARLR---GVPAEEIEKVANWSIKSLGLTVYADCLAGT-----YSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREGRAVVLTSH 2128
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABC8B_MOUSE (ATP-binding cassette sub-family A member 8-B OS=Mus musculus GN=Abca8b PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 46/165 (27.88%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 61 DRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQ----ETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 543 ++++ L ++ G +TA++G SGAGK+TL+++L+G +G + I + E R++G C Q ++ +T+ E+L A +R D +K V V+ +E+K +++ L LS Q+++LT + ++ + I +DEPT+GLD Sbjct: 493 NKIEALKDLTLDIYEGQITAVLGHSGAGKSTLLNILSGLSVP--TKGSVTIYNNNLSEMADLENILRIAGVCPQANVQFDFLTVRENLRLFAKIRGIPPQDVEKE---VQRVLLELEMKNIQNIL-----AQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLD 647
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: YFIL_BACSU (Uncharacterized ABC transporter ATP-binding protein yfiL OS=Bacillus subtilis GN=yfiL PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 49/185 (26.49%), Postives = 90/185 (48.65%), Query Frame = 1 Query: 73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVS--GYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 ++ +S + + G L+G +GAGK+T + +++G + G+I + GY +ET G Q P +T +E+L++ + + + KKR V E + L E + + S ++R+ I L+ P ++ MDEPT G+D ++ ++ TV+ +TG TV+ T H Sbjct: 16 IVKGISFSLKKGESFGLLGPNGAGKSTTISMISGLVP--HDSGNITVGGYVIGKETAKAKQKIGIVPQEIALYPTLTAHENLMFWGKMYGLTHGEAKKRAAEVLEYVGLTERAKDK--------IETFSGGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETGMTVIYTSH 190
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: Y4021_METAC (Putative ABC transporter ATP-binding protein MA_4021 OS=Methanosarcina acetivorans GN=MA_4021 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 55/206 (26.70%), Postives = 98/206 (47.57%), Query Frame = 1 Query: 52 VGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYIEGDIKISGYPKKQETF-------------ARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 621 VGE + +L +S PG +++G +G+GK+TL+ +L G G + D KI +E F +V + +D+ T++E + + L ++ ++ K V EV+E++EL L+D + LS ++K+L IA L NP ++ +DEPT+GLD R + ++ G+T++ H Sbjct: 15 VGE--ITVLKDISFKVDPGEQISIIGSNGSGKSTLLSLLDGLIYPTVGEFYAFDNKIV-----EEVFDTIKDNEFRSYFRTKVGFLFQNSDVQLFSPTVFEEVAFGP---LQLNITPEEVKTRVLEVLEMMELTKLKDR-----SPHTLSGGEKKKLCIATVLATNPDVLLLDEPTAGLDPRTQLWLTELLQELGSMGKTIIIATH 205 The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bpback to top |