FC931064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: MACD1_RAT (MACRO domain-containing protein 1 (Fragment) OS=Rattus norvegicus GN=Macrod1 PE=2 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 7.236e-26 Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY--GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DG IHRAAG L + C + C TG+A+IT G++LPA HVIHTVGPI T + A LRS Y +SL L + ++ +AFP IS G++ YP+EEAA + ++T++E+ Sbjct: 103 VNAANNSLLGGGGVDGCIHRAAGSLLTDECRTLQN------CETGKAKITCGYRLPAKHVIHTVGPIAVGQPTASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPNEEAAEVVLATLREW 223
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: YGB2_RALEU (UPF0189 protein in gbd 3'region OS=Ralstonia eutropha PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.450e-26 Identity = 62/125 (49.60%), Postives = 83/125 (66.40%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKE 692 VN+AN +LGGGG DGAIH A G + EAC + + G CPTGEA IT G LPA +VIH VGP++ G + L +AY+NS+ LA ++++ +AFP IS G+Y +P E AA IAI+ V+E Sbjct: 22 VNAANSGLLGGGGVDGAIHGAGGSAIKEACRAIRDTQGG--CPTGEAVITTGGHLPAPYVIHAVGPVWQGGDQGEDELLANAYRNSIRLAAQHHLRRLAFPNISTGIYAFPRERAADIAIAAVRE 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: MACD1_HUMAN (MACRO domain-containing protein 1 OS=Homo sapiens GN=MACROD1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.105e-25 Identity = 62/127 (48.82%), Postives = 85/127 (66.93%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPI-YG-VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DG IHRAAGP L + C + C TG+A+IT G++LPA +VIHTVGPI YG + + A LRS Y +SL L + ++ +AFP IS G++ YP E AA I ++T++E+ Sbjct: 170 VNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQS------CKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREW 290
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: MACD1_MOUSE (MACRO domain-containing protein 1 OS=Mus musculus GN=Macrod1 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.045e-24 Identity = 59/127 (46.46%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY--GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DG IHRAAG L + C + C TG+A+IT G++LPA +VIHTVGPI T + A LRS Y +SL L + ++ +AFP IS G++ YP+EEAA + +++++E+ Sbjct: 168 VNAANSSLLGGGGVDGCIHRAAGSLLTDECRTLQN------CETGKAKITCGYRLPAKYVIHTVGPIAVGQPTASQAAELRSCYLSSLDLLLEHRLRSVAFPCISTGVFGYPNEEAAEVVLASLREW 288
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y719_THEVO (UPF0189 protein TV0719 OS=Thermoplasma volcanium GN=TV0719 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24 Identity = 60/128 (46.88%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704 VN+AN ++GGGG DGAIH G + C + + P GEA IT G KL A +VIHTVGPIY +L S+Y SL +AK + I+ IAFPAIS G+Y YP EEA+ IA+ V +F ++ Sbjct: 27 VNAANPSLMGGGGVDGAIHLKGGKTIDLECAELRRTKWPKGLPPGEADITSGGKLKAKYVIHTVGPIYRGQEEDAETLYSSYYRSLEIAKIHGIKCIAFPAISTGIYGYPFEEASVIALKAVTDFLSN 154
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: MACD1_BOVIN (MACRO domain-containing protein 1 OS=Bos taurus GN=MACROD1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.186e-24 Identity = 59/127 (46.46%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPI-YG-VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DG IHRAAGP L + C + C TG+A+IT G++LPA +VIHTVGPI +G + + A LRS Y +SL L + ++ AFP IS G++ YP+E AA + ++ ++E+ Sbjct: 170 VNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQ------NCETGKAKITCGYRLPAKYVIHTVGPIAHGEPSASQAAELRSCYLSSLDLLLEHRLRSAAFPCISTGVFGYPNEAAAEVVLTALREW 290
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y189_STRGR (UPF0189 protein in non 5'region OS=Streptomyces griseus PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.845e-24 Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTV 686 VN+AN +LGGGG DGAIHR GP++L AC + +G PTG+A T +L A ++HTVGP++ + A L S Y+ SL LA + IAFPAIS G+Y +P ++ A IA+ TV Sbjct: 25 VNAANSSLLGGGGVDGAIHRRGGPDILAACRELRASRYGKGLPTGQAVATTAGRLDARWIVHTVGPVFSGAQDRSALLASCYRESLRLAAELGARSIAFPAISTGIYGWPMDDGARIAVRTV 146
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y1105_THEAC (UPF0189 protein Ta1105 OS=Thermoplasma acidophilum GN=Ta1105 PE=3 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 1.971e-23 Identity = 59/129 (45.74%), Postives = 80/129 (62.02%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704 VN+AN ++GGGG DGAIH AAGPEL ++ + P GEA IT G++L ASH+IHTVGP++ G + L +Y++ L LA+ I IAFPA+S G Y +P + A IAI +V +F D Sbjct: 27 VNAANSSLMGGGGVDGAIHSAAGPELNGELVKIRRERYPNGLPPGEAVITRGYRLKASHIIHTVGPVWMGGRNGEDDVLYRSYRSCLDLAREFGIHDIAFPALSTGAYGFPFDRAERIAIRSVIDFLKD 155
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y2748_LISMF (UPF0189 protein LMOf2365_2748 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=LMOf2365_2748 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23 Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRV-PEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEAS-LRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704 VN+AN +LGGGG DGAIH+AAGP+LL+ C V +G CP GEA IT L AS++IH VGPI+ + EA+ L S Y +L LA + IAFP IS G+Y +P + AA +A+ TV+++A + Sbjct: 19 VNAANPGLLGGGGVDGAIHQAAGPDLLKECQEVINRIG---TCPAGEAVITSAGDLQASYIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKELTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEE 145
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y2759_LISMO (UPF0189 protein lmo2759 OS=Listeria monocytogenes GN=lmo2759 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.733e-23 Identity = 61/130 (46.92%), Postives = 85/130 (65.38%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRV-PEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEAS-LRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704 VN+AN +LGGGG DGAIH+AAGP+LL+ C V +G CP GEA IT L A+++IH VGPI+ + EA+ L S Y +L LA ++ IAFP IS G+Y +P + AA +A+ TV+++A + Sbjct: 19 VNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIG---SCPAGEAVITSAGDLKATYIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEE 145 The following BLAST results are available for this feature:
BLAST of FC931064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931064 ID=FC931064; Name=FC931064; organism=Citrus clementina; type=EST; length=708bpback to top |