FC931072

Overview
NameFC931072
Unique NameFC931072
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15263 contig Ccv1_Contig15263:1..680. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.894e-45
Identity = 97/204 (47.55%), Postives = 132/204 (64.71%), Query Frame = 2
Query:   89 EESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +E  + A+QL    VLPM  + AI+L + EI+AKAG    L   +IA+ L  +N  AP+MLDR+LRLL S+ +L CS+        ERLYGL  V K+   N+DGVS+     +  DKV MESW  L+DA++EGGIPFN+ +GM  FEY   +P FN+ ++K M  HS +AM++ILE Y+GF+ +  LVDVGGG G  +S I S
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVS 219          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.708e-43
Identity = 96/208 (46.15%), Postives = 131/208 (62.98%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEII---AKAGKLSAPE-IAAQLQAQ--NVKAPMMLDRMLRLLVSHRVLECSVSSG----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITSN 679
            +EE+  +AMQLA   +LPM  + A++LG+ E++   A AGK  APE + A+L     N  A  M+DRMLRLL S+ V++C +       ER Y   PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN  +++ M NHS I  +++LE Y GF+ V  LVDVGGG G TL  ITS+
Sbjct:   13 DEEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSH 220          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.756e-42
Identity = 88/205 (42.93%), Postives = 129/205 (62.93%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGE----RLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            ++E+    A+ LA     PM  ++A +L + +I +KAG+   +S  EIA+Q+ A+N  AP++LDRMLRLL SH VL C +  GE    R+YG  P+  Y  SN    SLG  + L  DKV MESW  L D ++EGG+PF R HGM  F+Y   +  FN  +++ M +H+ + M+++L++Y GF +V+ LVDVGG  GV +SMI +
Sbjct:   17 KDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVA 221          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.643e-40
Identity = 92/209 (44.02%), Postives = 127/209 (60.77%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAK---AGK--LSAPEIAAQLQA---QNVKAPMMLDRMLRLLVSHRVLECSVSSG----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +EE+  +AMQLA   +LPM  + AI+LG+ E++ K    GK  L+  E+ A++ A       A  M+DRMLRLL S+ V+ C +       ER Y   PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +  FN  +++ M NHS I  +++L+ Y GF+ V  LVDVGGG G TL  ITS
Sbjct:   13 DEEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITS 221          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.426e-38
Identity = 86/212 (40.57%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEII---------AKAGKLSAPEIAAQLQAQ-NVKAPMMLDRMLRLLVSHRVLECSVSSG-----ERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +EE+  +A+QLA   +LPM  + AI+LG+ E +          KA  L+  E+A +L ++ N  A  M+DRMLRLL S+ V+ C +  G      R Y   PV K+   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +  FN  +++ M NHS I  +++L+ Y GF     +VDVGGG G T++ + S
Sbjct:   13 DEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVS 224          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35
Identity = 81/202 (40.10%), Postives = 128/202 (63.37%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---KLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGG-IPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +E  +Y   + L+  + LPMA +AAI+L VFEII++AG   +LS  +I A++  +N  A + LDR+LR+L +  +L  S +   R+YGL   S+  V+++D VS+   +    DK  +ES+  ++D V+E G IPF+R HGM  F+YA      N+++++AM   STIA + + + Y+GF N++ LVDVGGG G +LS I +
Sbjct:   34 QEGVNYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSGRVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVA 235          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.008e-26
Identity = 77/209 (36.84%), Postives = 113/209 (54.07%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK----LSAPEIAAQLQA--QNVKAPMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIP-FNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            E+ +   AM L   +V P    AAI L +FEIIAKA      +S  EIA++L A  Q+   P  LDRMLRLL S+ VL  +  +      ER+YGL+ V KY V ++    L  F         ++ W+  ++AV++  I  F  VHG+  +E+   +   N+ ++K+M +     M+R+LE Y GF+ +  LVDVGGG G  L +I S
Sbjct:   21 EDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIIS 229          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16
Identity = 59/203 (29.06%), Postives = 101/203 (49.75%), Query Frame = 2
Query:   77 KYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG-KLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVM-EGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEG-FQNVERLVDVGGGFGVTLSMITS 676
            K +   S +       G    +  + A+QL +  II  +G  ++  E++++L +Q V    +  R++R LV  ++   +   GE  YGL P +KY V   D   +G  +A+  DK FM  W  L+D +  E G  F +  G +I+ Y + +P  N+ +++AM N S + M  +++     F  +  LVDVGGG G  +  I +
Sbjct:    4 KKDNLSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALY-RVMRYLVHMKLFTKASIDGELRYGLAPPAKYLVKGWDKCMVGSILAI-TDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIAN 204          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15
Identity = 49/197 (24.87%), Postives = 99/197 (50.25%), Query Frame = 2
Query:   92 ESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK-LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSS-GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILE-HYEGFQNVERLVDVGGGFGVTLSMIT 673
            ++ +H  ++  G    +  + A++LG+ +II    + ++  ++A++L   +V    +  R+LR LV   +L    S  G++ Y L P++     N     +   + +   K FM  W  ++D + + G  F +  GM I+EY  G+P  ++ +++ M   + +    ++    + FQ ++ LVDVGGG G T+  I+
Sbjct:   13 KAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLY-RILRYLVKMEILRVEKSDDGQKKYALEPIATLLSRNAKRSMVPMILGMT-QKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAIS 207          
The following BLAST results are available for this feature:
BLAST of FC931072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT2_POPTM2.894e-4547.55Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_SACOF2.708e-4346.15Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR1.756e-4242.93Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE1.643e-4044.02Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ3.426e-3840.57Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA3.546e-3540.10(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA3.008e-2636.84Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA3.686e-1629.06(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA9.079e-1524.873'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]

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Properties
Property NameValue
Genbank descriptionC34101B03EF PostHarvP1 Citrus clementina cDNA clone C34101B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931072 ID=FC931072; Name=FC931072; organism=Citrus clementina; type=EST; length=680bp
AAAAAAGGAGGGAAAAAAAAAACTATAAGAAACAATGCGTTCGTTGTCGG
AAATACAGTTACCCAAACAGAATAATAAATATGAAGAAGAAGAGAGCTAT
TCACATGCCATGCAGCTAGCAATGGGCGTAGTGCTGCCCATGGCAACCCA
GGCAGCTATTCAGCTTGGCGTTTTTGAAATCATAGCCAAAGCTGGCAAAC
TCTCGGCTCCAGAGATTGCAGCACAGTTACAAGCGCAAAACGTAAAAGCA
CCAATGATGCTAGACAGAATGCTCAGGCTTCTGGTCAGCCACCGTGTGCT
TGAGTGCTCTGTTTCTAGTGGCGAGAGGCTATATGGTCTCACCCCCGTGT
CCAAATATTTTGTTAGTAATAAAGATGGTGTTTCGTTGGGTCACTTTATG
GCCTTGCCTCTCGACAAGGTCTTCATGGAGAGTTGGTTGGGATTGAGAGA
TGCAGTTATGGAGGGAGGAATACCATTCAATAGGGTGCATGGAATGCACA
TCTTTGAGTACGCTTCCGGAAACCCCGGGTTTAATGAAACTTATCACAAG
GCAATGTTCAACCACTCAACCATAGCCATGGAGAGAATCCTGGAACATTA
CGAGGGCTTTCAGAACGTTGAGCGACTCGTCGATGTTGGAGGAGGCTTTG
GTGTCACCCTCAGTATGATTACTTCCAATA
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