FC931074

Overview
NameFC931074
Unique NameFC931074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length560
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPY (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPS (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPP (S-adenosylmethionine synthetase OS=Yersinia pestis (strain Pestoides F) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPN (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPG (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPE (S-adenosylmethionine synthetase OS=Yersinia pestis GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPB (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERPA (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_YERP3 (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 66/107 (61.68%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV 522
            M   LFTSESV+EGHPDK+ D++SDAVLDA L QDP ++VACET  KT MV+V GE+TT A VD E+I R T R IG+  +D+G DA+ C VL  I +QSPDI QGV
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEVTTNAWVDIEEITRRTIREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of FC931074 vs. ExPASy Swiss-Prot
Match: METK_PROMS (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain AS9601) GN=metK PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.339e-30
Identity = 62/109 (56.88%), Postives = 83/109 (76.15%), Query Frame = 1
Query:  202 METFLFTSESVNEGHPDKLCDRVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADV-GLDADHCKVLVNIEQQSPDIAQGVH 525
            M  F+FTSESV EGHPDK+CD++SDAVLDA L +DP+S+VACET   T + ++ GEIT+KA VDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVN 109          
The following BLAST results are available for this feature:
BLAST of FC931074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_YERPY2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPS2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPP2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPN2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPG2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPE2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPB2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPA2.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERP32.339e-3061.68S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_PROMS2.339e-3056.88S-adenosylmethionine synthetase OS=Prochlorococcus... [more]

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Properties
Property NameValue
Genbank descriptionC34101B05EF PostHarvP1 Citrus clementina cDNA clone C34101B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931074 ID=FC931074; Name=FC931074; organism=Citrus clementina; type=EST; length=560bp
GAAAAAAAACGAGAGAACTGCGAGTCGAGCTGCCGTTTTAGCGCCTCGCT
CGCTTCTCGCAGCGTATGCATATCGTGTTTCTCTCGGTCTTCTGGGTACT
GACCATTTTCGTATATCACCACCTTCAATTCCATTTGTACTCGCACCACG
GCCTCCTGCAAAGCGAAAGCTGCAGCTTCAGGTTAAATCAAATTAAAGAA
AATGGAAACATTTCTTTTCACATCAGAATCAGTGAACGAGGGTCACCCGG
ACAAGCTGTGTGACCGAGTTTCGGACGCAGTACTGGACGCGTGTTTGGCT
CAGGATCCTGACAGCAAAGTTGCTTGTGAAACATGCACAAAGACCAACAT
GGTCATGGTTTTTGGAGAAATTACAACCAAGGCCAATGTGGATTACGAGA
AAATCGTGCGTGATACATGCAGATCGATTGGGTTCACATCGGCCGATGTG
GGGCTTGATGCTGATCACTGCAAAGTTCTTGTTAATATTGAGCAGCAGAG
CCCTGACATTGCTCAGGGTGTTCATGGGCATCTCACAAAGCGGCCTGAGG
AGATTGGTGC
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